RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 CCDC68Q9H2F9 335 aa12.53□□□□□ -0.4
TRAPPC1-206ENST00000573989 FAM114A2Q9NRY5 505 aa12.53□□□□□ -0.4
TRAPPC1-206ENST00000573989 INTS10Q9NVR2 710 aaKnown RBP12.53□□□□□ -0.4
TRAPPC1-206ENST00000573989 FAM8A1Q9UBU6 413 aa12.53□□□□□ -0.4
TRAPPC1-206ENST00000573989 CHMP2BQ9UQN3 213 aa12.53□□□□□ -0.4
TRAPPC1-206ENST00000573989 PCDHB1Q9Y5F3 818 aa12.53□□□□□ -0.4
TRAPPC1-206ENST00000573989 KNTC1P50748 2209 aa12.53□□□□□ -0.4
TRAPPC1-206ENST00000573989 TRBV23OR9-2A0A075B6M9 112 aa12.52□□□□□ -0.41
TRAPPC1-206ENST00000573989 A6NCN8 305 aa12.52□□□□□ -0.41
TRAPPC1-206ENST00000573989 PRR19A6NJB7 356 aa12.52□□□□□ -0.41
TRAPPC1-206ENST00000573989 GOLGA8KD6RF30 607 aa12.52□□□□□ -0.41
TRAPPC1-206ENST00000573989 E7ESA3 106 aa12.52□□□□□ -0.41
TRAPPC1-206ENST00000573989 GOLGA8TH3BQL2 631 aa12.52□□□□□ -0.41
TRAPPC1-206ENST00000573989 IFRD1O00458 451 aaPredicted RBP12.52□□□□□ -0.41
TRAPPC1-206ENST00000573989 KPNA5O15131 536 aa12.52□□□□□ -0.41
TRAPPC1-206ENST00000573989 SGTAO43765 313 aa12.52□□□□□ -0.41
TRAPPC1-206ENST00000573989 ZNF500O60304 480 aaPredicted RBP12.52□□□□□ -0.41
TRAPPC1-206ENST00000573989 OPA1O60313 960 aa12.52□□□□□ -0.41
TRAPPC1-206ENST00000573989 OR1I1O60431 355 aa12.52□□□□□ -0.41
TRAPPC1-206ENST00000573989 BANF1O75531 89 aa12.52□□□□□ -0.41
TRAPPC1-206ENST00000573989 TCEA3O75764 348 aa12.52□□□□□ -0.41
TRAPPC1-206ENST00000573989 SLC35G4P0C7Q5 338 aa12.52□□□□□ -0.41
TRAPPC1-206ENST00000573989 JUPP14923 745 aa12.52□□□□□ -0.41
TRAPPC1-206ENST00000573989 PPM1FP49593 454 aaPredicted RBP12.52□□□□□ -0.41
TRAPPC1-206ENST00000573989 ADARP55265 1226 aaKnown RBP12.52□□□□□ -0.41
TRAPPC1-206ENST00000573989 SLC7A5Q01650 507 aa12.52□□□□□ -0.41
TRAPPC1-206ENST00000573989 GUCY2DQ02846 1103 aa12.52□□□□□ -0.41
TRAPPC1-206ENST00000573989 CBLBQ13191 982 aa12.52□□□□□ -0.41
TRAPPC1-206ENST00000573989 SPIDRQ14159 915 aa12.52□□□□□ -0.41
TRAPPC1-206ENST00000573989 SEMA3AQ14563 771 aa12.52□□□□□ -0.41
TRAPPC1-206ENST00000573989 TYSND1Q2T9J0 566 aa12.52□□□□□ -0.41
TRAPPC1-206ENST00000573989 MSS51Q4VC12 460 aa12.52□□□□□ -0.41
TRAPPC1-206ENST00000573989 SYTL3Q4VX76 610 aa12.52□□□□□ -0.41
TRAPPC1-206ENST00000573989 PERM1Q5SV97 790 aa12.52□□□□□ -0.41
TRAPPC1-206ENST00000573989 ZNF470Q6ECI4 717 aa12.52□□□□□ -0.41
TRAPPC1-206ENST00000573989 RAB44Q7Z6P3 723 aaPredicted RBP12.52□□□□□ -0.41
TRAPPC1-206ENST00000573989 LDB1Q86U70 411 aaPredicted RBP12.52□□□□□ -0.41
TRAPPC1-206ENST00000573989 CILP2Q8IUL8 1156 aa12.52□□□□□ -0.41
TRAPPC1-206ENST00000573989 PALM2Q8IXS6 379 aa12.52□□□□□ -0.41
TRAPPC1-206ENST00000573989 ZBED8Q8IZ13 594 aa12.52□□□□□ -0.41
TRAPPC1-206ENST00000573989 FBXO36Q8NEA4 188 aa12.52□□□□□ -0.41
TRAPPC1-206ENST00000573989 PYROXD1Q8WU10 500 aa12.52□□□□□ -0.41
TRAPPC1-206ENST00000573989 PATE1Q8WXA2 126 aa12.52□□□□□ -0.41
TRAPPC1-206ENST00000573989 ELMO1Q92556 727 aa12.52□□□□□ -0.41
TRAPPC1-206ENST00000573989 ART4Q93070 314 aa12.52□□□□□ -0.41
TRAPPC1-206ENST00000573989 TMEM159Q96B96 161 aa12.52□□□□□ -0.41
TRAPPC1-206ENST00000573989 CFAP36Q96G28 342 aa12.52□□□□□ -0.41
TRAPPC1-206ENST00000573989 CARD6Q9BX69 1037 aa12.52□□□□□ -0.41
TRAPPC1-206ENST00000573989 TSPYL1Q9H0U9 437 aa12.52□□□□□ -0.41
TRAPPC1-206ENST00000573989 COG4Q9H9E3 785 aa12.52□□□□□ -0.41
TRAPPC1-206ENST00000573989 EPB41L5Q9HCM4 733 aa12.52□□□□□ -0.41
TRAPPC1-206ENST00000573989 PPANQ9NQ55 473 aaKnown RBP12.52□□□□□ -0.41
TRAPPC1-206ENST00000573989 POT1Q9NUX5 634 aa12.52□□□□□ -0.41
TRAPPC1-206ENST00000573989 GRHL1Q9NZI5 618 aa12.52□□□□□ -0.41
TRAPPC1-206ENST00000573989 MARCH4Q9P2E8 410 aaPredicted RBP12.52□□□□□ -0.41
TRAPPC1-206ENST00000573989 CPNE7Q9UBL6 633 aa12.52□□□□□ -0.41
TRAPPC1-206ENST00000573989 MTRF1LQ9UGC7 380 aaKnown RBP12.52□□□□□ -0.41
TRAPPC1-206ENST00000573989 HEBP2Q9Y5Z4 205 aa12.52□□□□□ -0.41
TRAPPC1-206ENST00000573989 TEX264Q9Y6I9 313 aa12.52□□□□□ -0.41
TRAPPC1-206ENST00000573989 RNF215Q9Y6U7 377 aa12.52□□□□□ -0.41
TRAPPC1-206ENST00000573989 CACNA1AO00555 2505 aa12.52□□□□□ -0.41
TRAPPC1-206ENST00000573989 TP73O15350 636 aa12.51□□□□□ -0.41
TRAPPC1-206ENST00000573989 ESR1P03372 595 aa12.51□□□□□ -0.41
TRAPPC1-206ENST00000573989 NDUFS1P28331 727 aa12.51□□□□□ -0.41
TRAPPC1-206ENST00000573989 ALDH4A1P30038 563 aa12.51□□□□□ -0.41
TRAPPC1-206ENST00000573989 EIF3BP55884 814 aaKnown RBP12.51□□□□□ -0.41
TRAPPC1-206ENST00000573989 GPLD1P80108 840 aa12.51□□□□□ -0.41
TRAPPC1-206ENST00000573989 KRT33BQ14525 404 aa12.51□□□□□ -0.41
TRAPPC1-206ENST00000573989 NR1D2Q14995 579 aa12.51□□□□□ -0.41
TRAPPC1-206ENST00000573989 TMED2Q15363 201 aa12.51□□□□□ -0.41
TRAPPC1-206ENST00000573989 SMAD1Q15797 465 aaKnown RBP12.51□□□□□ -0.41
TRAPPC1-206ENST00000573989 CLPPQ16740 277 aaPredicted RBP12.51□□□□□ -0.41
TRAPPC1-206ENST00000573989 HSP90AA5PQ58FG0 334 aa12.51□□□□□ -0.41
TRAPPC1-206ENST00000573989 HP1BP3Q5SSJ5 553 aaPredicted RBP12.51□□□□□ -0.41
TRAPPC1-206ENST00000573989 HES3Q5TGS1 186 aa12.51□□□□□ -0.41
TRAPPC1-206ENST00000573989 TMPRSS7Q7RTY8 843 aa12.51□□□□□ -0.41
TRAPPC1-206ENST00000573989 ZNF438Q7Z4V0 828 aa12.51□□□□□ -0.41
TRAPPC1-206ENST00000573989 CACTIN-AS1Q8N1I8 211 aa12.51□□□□□ -0.41
TRAPPC1-206ENST00000573989 AGGF1Q8N302 714 aaeCLIP12.51□□□□□ -0.41
TRAPPC1-206ENST00000573989 CHCHD4Q8N4Q1 142 aa12.51□□□□□ -0.41
TRAPPC1-206ENST00000573989 Q8N9G6 341 aaPredicted RBP12.51□□□□□ -0.41
TRAPPC1-206ENST00000573989 GSDMBQ8TAX9 411 aa12.51□□□□□ -0.41
TRAPPC1-206ENST00000573989 NAT14Q8WUY8 206 aa12.51□□□□□ -0.41
TRAPPC1-206ENST00000573989 ASZ1Q8WWH4 475 aa12.51□□□□□ -0.41
TRAPPC1-206ENST00000573989 CCDC97Q96F63 343 aaPredicted RBP12.51□□□□□ -0.41
TRAPPC1-206ENST00000573989 CERS2Q96G23 380 aa12.51□□□□□ -0.41
TRAPPC1-206ENST00000573989 AHCYL2Q96HN2 611 aaKnown RBP12.51□□□□□ -0.41
TRAPPC1-206ENST00000573989 DEPDC7Q96QD5 511 aa12.51□□□□□ -0.41
TRAPPC1-206ENST00000573989 GFM1Q96RP9 751 aaKnown RBP12.51□□□□□ -0.41
TRAPPC1-206ENST00000573989 DPYSL5Q9BPU6 564 aa12.51□□□□□ -0.41
TRAPPC1-206ENST00000573989 TRIM56Q9BRZ2 755 aaKnown RBP12.51□□□□□ -0.41
TRAPPC1-206ENST00000573989 ZMYND15Q9H091 742 aa12.51□□□□□ -0.41
TRAPPC1-206ENST00000573989 LRRN3Q9H3W5 708 aa12.51□□□□□ -0.41
TRAPPC1-206ENST00000573989 EPB41L1Q9H4G0 881 aa12.51□□□□□ -0.41
TRAPPC1-206ENST00000573989 SYNDIG1Q9H7V2 258 aa12.51□□□□□ -0.41
TRAPPC1-206ENST00000573989 UCK1Q9HA47 277 aa12.51□□□□□ -0.41
TRAPPC1-206ENST00000573989 SAYSD1Q9NPB0 183 aa12.51□□□□□ -0.41
TRAPPC1-206ENST00000573989 KCNK4Q9NYG8 393 aa12.51□□□□□ -0.41
TRAPPC1-206ENST00000573989 PSMD13Q9UNM6 376 aa12.51□□□□□ -0.41
TRAPPC1-206ENST00000573989 CLCA2Q9UQC9 943 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms