RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 BPTFQ12830 3046 aa12.45□□□□□ -0.42
NPLOC4-213ENST00000573519 UNC13CQ8NB66 2214 aa12.45□□□□□ -0.42
NPLOC4-213ENST00000573519 SMG1Q96Q15 3661 aaKnown RBP12.44□□□□□ -0.42
NPLOC4-213ENST00000573519 CCDC78A2IDD5 438 aa12.44□□□□□ -0.42
NPLOC4-213ENST00000573519 MGAT4DA6NG13 374 aa12.44□□□□□ -0.42
NPLOC4-213ENST00000573519 CFAP99D6REC4 459 aa12.44□□□□□ -0.42
NPLOC4-213ENST00000573519 POLR1CO15160 346 aaPredicted RBP12.44□□□□□ -0.42
NPLOC4-213ENST00000573519 LDB2O43679 373 aa12.44□□□□□ -0.42
NPLOC4-213ENST00000573519 NRDCO43847 1150 aa12.44□□□□□ -0.42
NPLOC4-213ENST00000573519 RAD1O60671 282 aa12.44□□□□□ -0.42
NPLOC4-213ENST00000573519 C1QL1O75973 258 aa12.44□□□□□ -0.42
NPLOC4-213ENST00000573519 POLBP06746 335 aa12.44□□□□□ -0.42
NPLOC4-213ENST00000573519 SLC35G4P0C7Q5 338 aa12.44□□□□□ -0.42
NPLOC4-213ENST00000573519 CAPZBP47756 277 aa12.44□□□□□ -0.42
NPLOC4-213ENST00000573519 LMAN1P49257 510 aa12.44□□□□□ -0.42
NPLOC4-213ENST00000573519 CYP4F2P78329 520 aa12.44□□□□□ -0.42
NPLOC4-213ENST00000573519 MSLNQ13421 630 aaPredicted RBP12.44□□□□□ -0.42
NPLOC4-213ENST00000573519 GSE1Q14687 1217 aa12.44□□□□□ -0.42
NPLOC4-213ENST00000573519 KCTD11Q693B1 232 aa12.44□□□□□ -0.42
NPLOC4-213ENST00000573519 ZNF662Q6ZS27 426 aa12.44□□□□□ -0.42
NPLOC4-213ENST00000573519 TAS2R42Q7RTR8 314 aa12.44□□□□□ -0.42
NPLOC4-213ENST00000573519 SNX20Q7Z614 316 aa12.44□□□□□ -0.42
NPLOC4-213ENST00000573519 SLC13A5Q86YT5 568 aaPredicted RBP12.44□□□□□ -0.42
NPLOC4-213ENST00000573519 NXPE1Q8N323 547 aa12.44□□□□□ -0.42
NPLOC4-213ENST00000573519 OR2L2Q8NH16 312 aa12.44□□□□□ -0.42
NPLOC4-213ENST00000573519 C1orf54Q8WWF1 131 aa12.44□□□□□ -0.42
NPLOC4-213ENST00000573519 RTP4Q96DX8 246 aa12.44□□□□□ -0.42
NPLOC4-213ENST00000573519 RNF31Q96EP0 1072 aa12.44□□□□□ -0.42
NPLOC4-213ENST00000573519 ZDHHC12Q96GR4 267 aa12.44□□□□□ -0.42
NPLOC4-213ENST00000573519 COPS8Q99627 209 aa12.44□□□□□ -0.42
NPLOC4-213ENST00000573519 ARHGAP9Q9BRR9 750 aa12.44□□□□□ -0.42
NPLOC4-213ENST00000573519 ARNT2Q9HBZ2 717 aa12.44□□□□□ -0.42
NPLOC4-213ENST00000573519 FBXO8Q9NRD0 319 aa12.44□□□□□ -0.42
NPLOC4-213ENST00000573519 PSMD3O43242 534 aa12.43□□□□□ -0.42
NPLOC4-213ENST00000573519 LIASO43766 372 aa12.43□□□□□ -0.42
NPLOC4-213ENST00000573519 KIF1CO43896 1103 aaKnown RBP12.43□□□□□ -0.42
NPLOC4-213ENST00000573519 AP2A1O95782 977 aa12.43□□□□□ -0.42
NPLOC4-213ENST00000573519 IFNB1P01574 187 aa12.43□□□□□ -0.42
NPLOC4-213ENST00000573519 C9P02748 559 aa12.43□□□□□ -0.42
NPLOC4-213ENST00000573519 ANKRD34CP0C6C1 535 aa12.43□□□□□ -0.42
NPLOC4-213ENST00000573519 MTHFD1P11586 935 aaKnown RBP12.43□□□□□ -0.42
NPLOC4-213ENST00000573519 ATP1B2P14415 290 aaPredicted RBP12.43□□□□□ -0.42
NPLOC4-213ENST00000573519 WT1P19544 449 aaPredicted RBP12.43□□□□□ -0.42
NPLOC4-213ENST00000573519 SNX1Q13596 522 aa12.43□□□□□ -0.42
NPLOC4-213ENST00000573519 KRT33BQ14525 404 aa12.43□□□□□ -0.42
NPLOC4-213ENST00000573519 BCL7AQ4VC05 210 aa12.43□□□□□ -0.42
NPLOC4-213ENST00000573519 CACHD1Q5VU97 1274 aa12.43□□□□□ -0.42
NPLOC4-213ENST00000573519 METRNLQ641Q3 311 aa12.43□□□□□ -0.42
NPLOC4-213ENST00000573519 DUS1LQ6P1R4 473 aaKnown RBP12.43□□□□□ -0.42
NPLOC4-213ENST00000573519 MICALCLQ6ZW33 695 aa12.43□□□□□ -0.42
NPLOC4-213ENST00000573519 CFAP206Q8IYR0 622 aa12.43□□□□□ -0.42
NPLOC4-213ENST00000573519 NLGN4XQ8N0W4 816 aa12.43□□□□□ -0.42
NPLOC4-213ENST00000573519 DNAAF3Q8N9W5 541 aa12.43□□□□□ -0.42
NPLOC4-213ENST00000573519 NLGN4YQ8NFZ3 816 aaPredicted RBP12.43□□□□□ -0.42
NPLOC4-213ENST00000573519 EXTL1Q92935 676 aa12.43□□□□□ -0.42
NPLOC4-213ENST00000573519 WBP1Q96G27 269 aa12.43□□□□□ -0.42
NPLOC4-213ENST00000573519 ELMO2Q96JJ3 720 aa12.43□□□□□ -0.42
NPLOC4-213ENST00000573519 C12orf66Q96MD2 445 aa12.43□□□□□ -0.42
NPLOC4-213ENST00000573519 INSM2Q96T92 566 aaPredicted RBP12.43□□□□□ -0.42
NPLOC4-213ENST00000573519 ZPBPQ9BS86 351 aa12.43□□□□□ -0.42
NPLOC4-213ENST00000573519 NLE1Q9NVX2 485 aaPredicted RBP12.43□□□□□ -0.42
NPLOC4-213ENST00000573519 ACSL5Q9ULC5 683 aa12.43□□□□□ -0.42
NPLOC4-213ENST00000573519 ZNF148Q9UQR1 794 aa12.43□□□□□ -0.42
NPLOC4-213ENST00000573519 ZNF106Q9H2Y7 1883 aaKnown RBP12.42□□□□□ -0.42
NPLOC4-213ENST00000573519 E7EVH7 732 aa12.42□□□□□ -0.42
NPLOC4-213ENST00000573519 TOX3O15405 576 aaPredicted RBP12.42□□□□□ -0.42
NPLOC4-213ENST00000573519 STK17BO94768 372 aa12.42□□□□□ -0.42
NPLOC4-213ENST00000573519 GAS8O95995 478 aa12.42□□□□□ -0.42
NPLOC4-213ENST00000573519 PRSS56P0CW18 603 aa12.42□□□□□ -0.42
NPLOC4-213ENST00000573519 LIFP15018 202 aa12.42□□□□□ -0.42
NPLOC4-213ENST00000573519 STIP1P31948 543 aaKnown RBP12.42□□□□□ -0.42
NPLOC4-213ENST00000573519 CDKN1CP49918 316 aaPredicted RBP12.42□□□□□ -0.42
NPLOC4-213ENST00000573519 PPP1CAP62136 330 aa12.42□□□□□ -0.42
NPLOC4-213ENST00000573519 SH3BP2P78314 561 aa12.42□□□□□ -0.42
NPLOC4-213ENST00000573519 GPR33Q49SQ1 333 aa12.42□□□□□ -0.42
NPLOC4-213ENST00000573519 KLHL35Q6PF15 583 aa12.42□□□□□ -0.42
NPLOC4-213ENST00000573519 PPP1R21Q6ZMI0 780 aa12.42□□□□□ -0.42
NPLOC4-213ENST00000573519 PRUNE1Q86TP1 453 aa12.42□□□□□ -0.42
NPLOC4-213ENST00000573519 LINC00523Q86TU6 105 aa12.42□□□□□ -0.42
NPLOC4-213ENST00000573519 SERPINA9Q86WD7 417 aa12.42□□□□□ -0.42
NPLOC4-213ENST00000573519 RASGRP3Q8IV61 690 aa12.42□□□□□ -0.42
NPLOC4-213ENST00000573519 KLHDC8BQ8IXV7 354 aa12.42□□□□□ -0.42
NPLOC4-213ENST00000573519 ZNF843Q8N446 348 aa12.42□□□□□ -0.42
NPLOC4-213ENST00000573519 LILRA3Q8N6C8 439 aaPredicted RBP12.42□□□□□ -0.42
NPLOC4-213ENST00000573519 SPDYE1Q8NFV5 336 aaPredicted RBP12.42□□□□□ -0.42
NPLOC4-213ENST00000573519 OR52K1Q8NGK4 314 aa12.42□□□□□ -0.42
NPLOC4-213ENST00000573519 HEXDCQ8WVB3 486 aa12.42□□□□□ -0.42
NPLOC4-213ENST00000573519 KIAA1143Q96AT1 154 aaPredicted RBP12.42□□□□□ -0.42
NPLOC4-213ENST00000573519 OR6C1Q96RD1 312 aa12.42□□□□□ -0.42
NPLOC4-213ENST00000573519 TLR10Q9BXR5 811 aa12.42□□□□□ -0.42
NPLOC4-213ENST00000573519 FRMD8P1Q9BZ68 369 aaPredicted RBP12.42□□□□□ -0.42
NPLOC4-213ENST00000573519 SEMA4CQ9C0C4 833 aa12.42□□□□□ -0.42
NPLOC4-213ENST00000573519 ZNF768Q9H5H4 540 aaKnown RBP12.42□□□□□ -0.42
NPLOC4-213ENST00000573519 ZDHHC3Q9NYG2 299 aa12.42□□□□□ -0.42
NPLOC4-213ENST00000573519 PILRAQ9UKJ1 303 aa12.42□□□□□ -0.42
NPLOC4-213ENST00000573519 KLHL33A6NCF5 533 aa12.41□□□□□ -0.42
NPLOC4-213ENST00000573519 AGAP14A8MT82 685 aa12.41□□□□□ -0.42
NPLOC4-213ENST00000573519 SGTAO43765 313 aa12.41□□□□□ -0.42
NPLOC4-213ENST00000573519 ETS1P14921 441 aa12.41□□□□□ -0.42
NPLOC4-213ENST00000573519 ACRV1P26436 265 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms