RNA–Protein interactions for RNA: ENST00000572844.1

POLR2A-201, Transcript of RNA polymerase II subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLR2A, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-201ENST00000572844 GRM6O15303 877 aa16.04■□□□□ 0.16
POLR2A-201ENST00000572844 SYNCRIPO60506 623 aaKnown RBP16.04■□□□□ 0.16
POLR2A-201ENST00000572844 FGF19O95750 216 aa16.04■□□□□ 0.16
POLR2A-201ENST00000572844 LINC00271P0C7V0 271 aa16.04■□□□□ 0.16
POLR2A-201ENST00000572844 ZCCHC18P0CG32 403 aa16.04■□□□□ 0.16
POLR2A-201ENST00000572844 PAX7P23759 505 aa16.04■□□□□ 0.16
POLR2A-201ENST00000572844 DDX6P26196 483 aaKnown RBP eCLIP16.04■□□□□ 0.168e-7■■■□□ 15.3
POLR2A-201ENST00000572844 NSG1P42857 185 aa16.04■□□□□ 0.16
POLR2A-201ENST00000572844 POLR2JP52435 117 aaKnown RBP16.04■□□□□ 0.16
POLR2A-201ENST00000572844 TLR1Q15399 786 aa16.04■□□□□ 0.16
POLR2A-201ENST00000572844 USP45Q70EL2 814 aa16.04■□□□□ 0.16
POLR2A-201ENST00000572844 GALNT13Q8IUC8 556 aa16.04■□□□□ 0.16
POLR2A-201ENST00000572844 ZNF557Q8N988 423 aaPredicted RBP16.04■□□□□ 0.16
POLR2A-201ENST00000572844 METTL6Q8TCB7 284 aa16.04■□□□□ 0.16
POLR2A-201ENST00000572844 LRCH3Q96II8 777 aa16.04■□□□□ 0.16
POLR2A-201ENST00000572844 ZNF641Q96N77 438 aaPredicted RBP16.04■□□□□ 0.16
POLR2A-201ENST00000572844 SUV39H2Q9H5I1 410 aa16.04■□□□□ 0.16
POLR2A-201ENST00000572844 ZDHHC3Q9NYG2 299 aa16.04■□□□□ 0.16
POLR2A-201ENST00000572844 ACTR3BQ9P1U1 418 aa16.04■□□□□ 0.16
POLR2A-201ENST00000572844 NPIPB15A6NHN6 443 aaPredicted RBP16.04■□□□□ 0.16
POLR2A-201ENST00000572844 TAPBPO15533 448 aa16.04■□□□□ 0.16
POLR2A-201ENST00000572844 CXCL14O95715 111 aa16.04■□□□□ 0.16
POLR2A-201ENST00000572844 CAPN1P07384 714 aa16.04■□□□□ 0.16
POLR2A-201ENST00000572844 ZNF26P17031 533 aaPredicted RBP16.04■□□□□ 0.16
POLR2A-201ENST00000572844 UGT1A6P19224 532 aa16.04■□□□□ 0.16
POLR2A-201ENST00000572844 UGT1A1P22309 533 aa16.04■□□□□ 0.16
POLR2A-201ENST00000572844 UGT1A4P22310 534 aa16.04■□□□□ 0.16
POLR2A-201ENST00000572844 UGT1A3P35503 534 aa16.04■□□□□ 0.16
POLR2A-201ENST00000572844 UGT1A5P35504 534 aa16.04■□□□□ 0.16
POLR2A-201ENST00000572844 EEFSECP57772 596 aaKnown RBP16.04■□□□□ 0.16
POLR2A-201ENST00000572844 TRAF3Q13114 568 aa16.04■□□□□ 0.16
POLR2A-201ENST00000572844 OR4F6Q8NGB9 312 aa16.04■□□□□ 0.16
POLR2A-201ENST00000572844 TMEM125Q96AQ2 219 aa16.04■□□□□ 0.16
POLR2A-201ENST00000572844 CCM2LQ9NUG4 571 aaPredicted RBP16.04■□□□□ 0.16
POLR2A-201ENST00000572844 KCTD5Q9NXV2 234 aa16.04■□□□□ 0.16
POLR2A-201ENST00000572844 SUN2Q9UH99 717 aa16.04■□□□□ 0.16
POLR2A-201ENST00000572844 C15orf38-AP3S2A0A0A6YYH1 394 aa16.03■□□□□ 0.16
POLR2A-201ENST00000572844 ASPDHA6ND91 283 aa16.03■□□□□ 0.16
POLR2A-201ENST00000572844 CCDC154A6NI56 674 aa16.03■□□□□ 0.16
POLR2A-201ENST00000572844 SOBPA7XYQ1 873 aa16.03■□□□□ 0.16
POLR2A-201ENST00000572844 TXNDC9O14530 226 aa16.03■□□□□ 0.16
POLR2A-201ENST00000572844 WDR47O94967 919 aa16.03■□□□□ 0.16
POLR2A-201ENST00000572844 TRIM16O95361 564 aa16.03■□□□□ 0.16
POLR2A-201ENST00000572844 POP4O95707 220 aaKnown RBP16.03■□□□□ 0.16
POLR2A-201ENST00000572844 ATP6V1B2P21281 511 aa16.03■□□□□ 0.16
POLR2A-201ENST00000572844 ITGB8P26012 769 aa16.03■□□□□ 0.16
POLR2A-201ENST00000572844 HLA-FP30511 346 aa16.03■□□□□ 0.16
POLR2A-201ENST00000572844 EPHA5P54756 1037 aa16.03■□□□□ 0.16
POLR2A-201ENST00000572844 UFM1P61960 85 aa16.03■□□□□ 0.16
POLR2A-201ENST00000572844 HTRA4P83105 476 aaPredicted RBP16.03■□□□□ 0.16
POLR2A-201ENST00000572844 NFYCQ13952 458 aa16.03■□□□□ 0.16
POLR2A-201ENST00000572844 CARD16Q5EG05 197 aa16.03■□□□□ 0.16
POLR2A-201ENST00000572844 RTL10Q7L3V2 364 aa16.03■□□□□ 0.16
POLR2A-201ENST00000572844 ARPINQ7Z6K5 226 aa16.03■□□□□ 0.16
POLR2A-201ENST00000572844 PTRH1Q86Y79 214 aaKnown RBP16.03■□□□□ 0.16
POLR2A-201ENST00000572844 PLPP6Q8IY26 295 aa16.03■□□□□ 0.16
POLR2A-201ENST00000572844 CMTM8Q8IZV2 173 aa16.03■□□□□ 0.16
POLR2A-201ENST00000572844 SFRP1Q8N474 314 aa16.03■□□□□ 0.16
POLR2A-201ENST00000572844 DPP10Q8N608 796 aa16.03■□□□□ 0.16
POLR2A-201ENST00000572844 FNDC5Q8NAU1 212 aa16.03■□□□□ 0.16
POLR2A-201ENST00000572844 GPR26Q8NDV2 337 aa16.03■□□□□ 0.16
POLR2A-201ENST00000572844 ULK4Q96C45 1275 aa16.03■□□□□ 0.16
POLR2A-201ENST00000572844 TEX37Q96LM6 180 aa16.03■□□□□ 0.16
POLR2A-201ENST00000572844 GBP5Q96PP8 586 aa16.03■□□□□ 0.16
POLR2A-201ENST00000572844 CD244Q9BZW8 370 aa16.03■□□□□ 0.16
POLR2A-201ENST00000572844 NSUN3Q9H649 340 aaKnown RBP16.03■□□□□ 0.16
POLR2A-201ENST00000572844 IPPKQ9H8X2 491 aa16.03■□□□□ 0.16
POLR2A-201ENST00000572844 SLC25A13Q9UJS0 675 aa16.03■□□□□ 0.16
POLR2A-201ENST00000572844 IRAK3Q9Y616 596 aa16.03■□□□□ 0.16
POLR2A-201ENST00000572844 AP4B1Q9Y6B7 739 aa16.03■□□□□ 0.16
POLR2A-201ENST00000572844 MYOFQ9NZM1 2061 aa16.03■□□□□ 0.16
POLR2A-201ENST00000572844 IGLV3-16A0A075B6K0 115 aa16.03■□□□□ 0.16
POLR2A-201ENST00000572844 NRG2O14511 850 aaPredicted RBP16.03■□□□□ 0.16
POLR2A-201ENST00000572844 BMP2P12643 396 aa16.03■□□□□ 0.16
POLR2A-201ENST00000572844 PRKG2Q13237 762 aa16.03■□□□□ 0.16
POLR2A-201ENST00000572844 DMC1Q14565 340 aa16.03■□□□□ 0.16
POLR2A-201ENST00000572844 INPP5AQ14642 412 aa16.03■□□□□ 0.16
POLR2A-201ENST00000572844 FUT11Q495W5 492 aa16.03■□□□□ 0.16
POLR2A-201ENST00000572844 IL27RAQ6UWB1 636 aa16.03■□□□□ 0.16
POLR2A-201ENST00000572844 CYP2R1Q6VVX0 501 aa16.03■□□□□ 0.16
POLR2A-201ENST00000572844 MILR1Q7Z6M3 343 aa16.03■□□□□ 0.16
POLR2A-201ENST00000572844 TSPAN33Q86UF1 283 aa16.03■□□□□ 0.16
POLR2A-201ENST00000572844 ZFAND4Q86XD8 727 aa16.03■□□□□ 0.16
POLR2A-201ENST00000572844 CLDN19Q8N6F1 224 aa16.03■□□□□ 0.16
POLR2A-201ENST00000572844 ANKFN1Q8N957 763 aa16.03■□□□□ 0.16
POLR2A-201ENST00000572844 PROKR1Q8TCW9 393 aa16.03■□□□□ 0.16
POLR2A-201ENST00000572844 LRTOMTQ8WZ04 291 aa16.03■□□□□ 0.16
POLR2A-201ENST00000572844 CLP1Q92989 425 aaKnown RBP16.03■□□□□ 0.16
POLR2A-201ENST00000572844 EME1Q96AY2 570 aa16.03■□□□□ 0.16
POLR2A-201ENST00000572844 RHBDF1Q96CC6 855 aa16.03■□□□□ 0.16
POLR2A-201ENST00000572844 PPP3R2Q96LZ3 170 aa16.03■□□□□ 0.16
POLR2A-201ENST00000572844 CORO1BQ9BR76 489 aa16.03■□□□□ 0.16
POLR2A-201ENST00000572844 IL1RL2Q9HB29 575 aa16.03■□□□□ 0.16
POLR2A-201ENST00000572844 ELOVL2Q9NXB9 296 aa16.03■□□□□ 0.16
POLR2A-201ENST00000572844 CNOT6Q9ULM6 557 aaKnown RBP16.03■□□□□ 0.16
POLR2A-201ENST00000572844 SUFUQ9UMX1 484 aa16.03■□□□□ 0.16
POLR2A-201ENST00000572844 TRIM43BA6NCK2 446 aa16.02■□□□□ 0.15
POLR2A-201ENST00000572844 ARNTLO00327 626 aa16.02■□□□□ 0.15
POLR2A-201ENST00000572844 LSM1O15116 133 aaKnown RBP16.02■□□□□ 0.15
POLR2A-201ENST00000572844 CHRM1P11229 460 aaPredicted RBP16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms