RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 RDH14Q9HBH5 336 aa7.34□□□□□ -1.23
NUP88-205ENST00000572809 ARFGAP3Q9NP61 516 aa7.34□□□□□ -1.23
NUP88-205ENST00000572809 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.34□□□□□ -1.23
NUP88-205ENST00000572809 HACD3Q9P035 362 aa7.34□□□□□ -1.23
NUP88-205ENST00000572809 NFKBIL1Q9UBC1 381 aaPredicted RBP7.34□□□□□ -1.23
NUP88-205ENST00000572809 RSPH14Q9UHP6 348 aa7.34□□□□□ -1.23
NUP88-205ENST00000572809 AAR2Q9Y312 384 aaKnown RBP7.34□□□□□ -1.23
NUP88-205ENST00000572809 WDFY3Q8IZQ1 3526 aa7.34□□□□□ -1.23
NUP88-205ENST00000572809 CHD6Q8TD26 2715 aa7.34□□□□□ -1.23
NUP88-205ENST00000572809 ARHGEF17Q96PE2 2063 aaPredicted RBP7.33□□□□□ -1.24
NUP88-205ENST00000572809 COL27A1Q8IZC6 1860 aaPredicted RBP7.33□□□□□ -1.24
NUP88-205ENST00000572809 IGHV1OR21-1A0A087WYE8 117 aa7.33□□□□□ -1.24
NUP88-205ENST00000572809 A0A0U1RQJ8 604 aa7.33□□□□□ -1.24
NUP88-205ENST00000572809 GOLGA6L9A6NEM1 432 aa7.33□□□□□ -1.24
NUP88-205ENST00000572809 OR5K4A6NMS3 321 aa7.33□□□□□ -1.24
NUP88-205ENST00000572809 CDRT15L2A8MXV6 281 aa7.33□□□□□ -1.24
NUP88-205ENST00000572809 MIF4GDA9UHW6 222 aaKnown RBP7.33□□□□□ -1.24
NUP88-205ENST00000572809 GPR89AB7ZAQ6 455 aa7.33□□□□□ -1.24
NUP88-205ENST00000572809 AGRPO00253 132 aa7.33□□□□□ -1.24
NUP88-205ENST00000572809 CHUKO15111 745 aa7.33□□□□□ -1.24
NUP88-205ENST00000572809 KMOO15229 486 aa7.33□□□□□ -1.24
NUP88-205ENST00000572809 KCNN4O15554 427 aa7.33□□□□□ -1.24
NUP88-205ENST00000572809 KLK10O43240 276 aa7.33□□□□□ -1.24
NUP88-205ENST00000572809 VEGFDO43915 354 aa7.33□□□□□ -1.24
NUP88-205ENST00000572809 SNX2O60749 519 aa7.33□□□□□ -1.24
NUP88-205ENST00000572809 STK10O94804 968 aaKnown RBP7.33□□□□□ -1.24
NUP88-205ENST00000572809 CDK14O94921 469 aa7.33□□□□□ -1.24
NUP88-205ENST00000572809 EML2O95834 649 aa7.33□□□□□ -1.24
NUP88-205ENST00000572809 PF4P02776 101 aa7.33□□□□□ -1.24
NUP88-205ENST00000572809 PTMAP06454 111 aaKnown RBP7.33□□□□□ -1.24
NUP88-205ENST00000572809 ITGA2BP08514 1039 aa7.33□□□□□ -1.24
NUP88-205ENST00000572809 JMJD7P0C870 316 aa7.33□□□□□ -1.24
NUP88-205ENST00000572809 GPR89BP0CG08 455 aa7.33□□□□□ -1.24
NUP88-205ENST00000572809 ACP5P13686 325 aa7.33□□□□□ -1.24
NUP88-205ENST00000572809 HGFP14210 728 aa7.33□□□□□ -1.24
NUP88-205ENST00000572809 FASLGP48023 281 aa7.33□□□□□ -1.24
NUP88-205ENST00000572809 CLCNKAP51800 687 aa7.33□□□□□ -1.24
NUP88-205ENST00000572809 PCDH1Q08174 1060 aa7.33□□□□□ -1.24
NUP88-205ENST00000572809 TMEM115Q12893 351 aaPredicted RBP7.33□□□□□ -1.24
NUP88-205ENST00000572809 SQSTM1Q13501 440 aa7.33□□□□□ -1.24
NUP88-205ENST00000572809 MAP9Q49MG5 647 aa7.33□□□□□ -1.24
NUP88-205ENST00000572809 ATP13A5Q4VNC0 1218 aa7.33□□□□□ -1.24
NUP88-205ENST00000572809 PHF19Q5T6S3 580 aa7.33□□□□□ -1.24
NUP88-205ENST00000572809 BROXQ5VW32 411 aa7.33□□□□□ -1.24
NUP88-205ENST00000572809 NKAIN2Q5VXU1 208 aa7.33□□□□□ -1.24
NUP88-205ENST00000572809 IYDQ6PHW0 289 aa7.33□□□□□ -1.24
NUP88-205ENST00000572809 RANBP10Q6VN20 620 aa7.33□□□□□ -1.24
NUP88-205ENST00000572809 ZNF574Q6ZN55 896 aaPredicted RBP7.33□□□□□ -1.24
NUP88-205ENST00000572809 PHYKPLQ8IUZ5 450 aa7.33□□□□□ -1.24
NUP88-205ENST00000572809 SLITRK4Q8IW52 837 aa7.33□□□□□ -1.24
NUP88-205ENST00000572809 SFRP1Q8N474 314 aa7.33□□□□□ -1.24
NUP88-205ENST00000572809 TTC30BQ8N4P2 665 aa7.33□□□□□ -1.24
NUP88-205ENST00000572809 RNF10Q8N5U6 811 aaKnown RBP7.33□□□□□ -1.24
NUP88-205ENST00000572809 PHC3Q8NDX5 983 aa7.33□□□□□ -1.24
NUP88-205ENST00000572809 GDAP1Q8TB36 358 aa7.33□□□□□ -1.24
NUP88-205ENST00000572809 DTX3LQ8TDB6 740 aa7.33□□□□□ -1.24
NUP88-205ENST00000572809 BRSK1Q8TDC3 778 aa7.33□□□□□ -1.24
NUP88-205ENST00000572809 BLOC1S5Q8TDH9 187 aa7.33□□□□□ -1.24
NUP88-205ENST00000572809 SLC37A2Q8TED4 501 aa7.33□□□□□ -1.24
NUP88-205ENST00000572809 KCNE4Q8WWG9 221 aa7.33□□□□□ -1.24
NUP88-205ENST00000572809 TMEM159Q96B96 161 aa7.33□□□□□ -1.24
NUP88-205ENST00000572809 SH3KBP1Q96B97 665 aa7.33□□□□□ -1.24
NUP88-205ENST00000572809 TTC25Q96NG3 672 aa7.33□□□□□ -1.24
NUP88-205ENST00000572809 VPS35Q96QK1 796 aa7.33□□□□□ -1.24
NUP88-205ENST00000572809 SLC38A3Q99624 504 aa7.33□□□□□ -1.24
NUP88-205ENST00000572809 CMKLR1Q99788 373 aa7.33□□□□□ -1.24
NUP88-205ENST00000572809 DPYSL5Q9BPU6 564 aa7.33□□□□□ -1.24
NUP88-205ENST00000572809 FAM118BQ9BPY3 351 aa7.33□□□□□ -1.24
NUP88-205ENST00000572809 DESI2Q9BSY9 194 aa7.33□□□□□ -1.24
NUP88-205ENST00000572809 FSD1LQ9BXM9 530 aa7.33□□□□□ -1.24
NUP88-205ENST00000572809 GBA3Q9H227 469 aa7.33□□□□□ -1.24
NUP88-205ENST00000572809 SEMA6CQ9H3T2 930 aa7.33□□□□□ -1.24
NUP88-205ENST00000572809 PRORYQ9H606 182 aa7.33□□□□□ -1.24
NUP88-205ENST00000572809 IL26Q9NPH9 171 aa7.33□□□□□ -1.24
NUP88-205ENST00000572809 KLC4Q9NSK0 619 aa7.33□□□□□ -1.24
NUP88-205ENST00000572809 KCNK4Q9NYG8 393 aa7.33□□□□□ -1.24
NUP88-205ENST00000572809 AKAP7Q9P0M2 348 aaPredicted RBP7.33□□□□□ -1.24
NUP88-205ENST00000572809 IL17CQ9P0M4 197 aa7.33□□□□□ -1.24
NUP88-205ENST00000572809 TRIM10Q9UDY6 481 aa7.33□□□□□ -1.24
NUP88-205ENST00000572809 TBC1D29Q9UFV1 150 aa7.33□□□□□ -1.24
NUP88-205ENST00000572809 SLC23A2Q9UGH3 650 aa7.33□□□□□ -1.24
NUP88-205ENST00000572809 PACSIN2Q9UNF0 486 aaPredicted RBP7.33□□□□□ -1.24
NUP88-205ENST00000572809 KCNK6Q9Y257 313 aa7.33□□□□□ -1.24
NUP88-205ENST00000572809 PKP3Q9Y446 797 aa7.33□□□□□ -1.24
NUP88-205ENST00000572809 LOXL2Q9Y4K0 774 aa7.33□□□□□ -1.24
NUP88-205ENST00000572809 PCDHGA7Q9Y5G6 932 aa7.33□□□□□ -1.24
NUP88-205ENST00000572809 UNC13CQ8NB66 2214 aa7.33□□□□□ -1.24
NUP88-205ENST00000572809 KIR2DS5A0A0G2JLQ3 304 aa7.32□□□□□ -1.24
NUP88-205ENST00000572809 A0A0G2JNG1 304 aa7.32□□□□□ -1.24
NUP88-205ENST00000572809 IGHV5-10-1A0A0J9YXX1 117 aa7.32□□□□□ -1.24
NUP88-205ENST00000572809 C5orf60A6NFR6 353 aa7.32□□□□□ -1.24
NUP88-205ENST00000572809 C2orf81A6NN90 581 aa7.32□□□□□ -1.24
NUP88-205ENST00000572809 KIR2DS3K7RE56 304 aa7.32□□□□□ -1.24
NUP88-205ENST00000572809 NVLO15381 856 aaKnown RBP7.32□□□□□ -1.24
NUP88-205ENST00000572809 STX7O15400 261 aaKnown RBP7.32□□□□□ -1.24
NUP88-205ENST00000572809 DDX3YO15523 660 aaKnown RBP7.32□□□□□ -1.24
NUP88-205ENST00000572809 ZZEF1O43149 2961 aa7.32□□□□□ -1.24
NUP88-205ENST00000572809 BUD23O43709 281 aaKnown RBP7.32□□□□□ -1.24
NUP88-205ENST00000572809 UGT1A9O60656 530 aa7.32□□□□□ -1.24
NUP88-205ENST00000572809 PPFIA2O75334 1257 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms