RNA–Protein interactions for RNA: ENST00000572205.5

SMG6-210, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-210ENST00000572205 TSTD2Q5T7W7 516 aa8.52□□□□□ -1.05
SMG6-210ENST00000572205 NKAIN2Q5VXU1 208 aa8.52□□□□□ -1.05
SMG6-210ENST00000572205 DUS1LQ6P1R4 473 aaKnown RBP8.52□□□□□ -1.05
SMG6-210ENST00000572205 PACS1Q6VY07 963 aa8.52□□□□□ -1.05
SMG6-210ENST00000572205 SNX20Q7Z614 316 aa8.52□□□□□ -1.05
SMG6-210ENST00000572205 SERPINA9Q86WD7 417 aa8.52□□□□□ -1.05
SMG6-210ENST00000572205 MPP5Q8N3R9 675 aa8.52□□□□□ -1.05
SMG6-210ENST00000572205 WDR48Q8TAF3 677 aa8.52□□□□□ -1.05
SMG6-210ENST00000572205 LKAAEAR1Q8TD35 194 aa8.52□□□□□ -1.05
SMG6-210ENST00000572205 STYXQ8WUJ0 223 aa8.52□□□□□ -1.05
SMG6-210ENST00000572205 SCG3Q8WXD2 468 aaKnown RBP8.52□□□□□ -1.05
SMG6-210ENST00000572205 SLCO2A1Q92959 643 aa8.52□□□□□ -1.05
SMG6-210ENST00000572205 SGF29Q96ES7 293 aa8.52□□□□□ -1.05
SMG6-210ENST00000572205 CRELD1Q96HD1 420 aa8.52□□□□□ -1.05
SMG6-210ENST00000572205 PBKQ96KB5 322 aa8.52□□□□□ -1.05
SMG6-210ENST00000572205 NRTNQ99748 197 aa8.52□□□□□ -1.05
SMG6-210ENST00000572205 FAM96AQ9H5X1 160 aa8.52□□□□□ -1.05
SMG6-210ENST00000572205 CCDC86Q9H6F5 360 aaKnown RBP8.52□□□□□ -1.05
SMG6-210ENST00000572205 ASB8Q9H765 288 aa8.52□□□□□ -1.05
SMG6-210ENST00000572205 POLR1BQ9H9Y6 1135 aa8.52□□□□□ -1.05
SMG6-210ENST00000572205 UCK1Q9HA47 277 aa8.52□□□□□ -1.05
SMG6-210ENST00000572205 RDH14Q9HBH5 336 aa8.52□□□□□ -1.05
SMG6-210ENST00000572205 SYBUQ9NX95 663 aa8.52□□□□□ -1.05
SMG6-210ENST00000572205 SIDT1Q9NXL6 827 aaKnown RBP8.52□□□□□ -1.05
SMG6-210ENST00000572205 CPNE7Q9UBL6 633 aa8.52□□□□□ -1.05
SMG6-210ENST00000572205 PCDHGA8Q9Y5G5 932 aa8.52□□□□□ -1.05
SMG6-210ENST00000572205 PCSK5Q92824 1860 aa8.51□□□□□ -1.05
SMG6-210ENST00000572205 KIR2DS5A0A0G2JLQ3 304 aa8.51□□□□□ -1.05
SMG6-210ENST00000572205 A0A0G2JNG1 304 aa8.51□□□□□ -1.05
SMG6-210ENST00000572205 KIR2DS3K7RE56 304 aa8.51□□□□□ -1.05
SMG6-210ENST00000572205 ZSCAN12O43309 604 aa8.51□□□□□ -1.05
SMG6-210ENST00000572205 CPNE6O95741 557 aa8.51□□□□□ -1.05
SMG6-210ENST00000572205 C9P02748 559 aa8.51□□□□□ -1.05
SMG6-210ENST00000572205 APRTP07741 180 aa8.51□□□□□ -1.05
SMG6-210ENST00000572205 HGFP14210 728 aa8.51□□□□□ -1.05
SMG6-210ENST00000572205 XRCC1P18887 633 aaPredicted RBP8.51□□□□□ -1.05
SMG6-210ENST00000572205 MSNP26038 577 aaKnown RBP8.51□□□□□ -1.05
SMG6-210ENST00000572205 RPL10P27635 214 aaKnown RBP8.51□□□□□ -1.05
SMG6-210ENST00000572205 EIF2S3P41091 472 aaKnown RBP8.51□□□□□ -1.05
SMG6-210ENST00000572205 ARCN1P48444 511 aaKnown RBP8.51□□□□□ -1.05
SMG6-210ENST00000572205 FNTAP49354 379 aa8.51□□□□□ -1.05
SMG6-210ENST00000572205 LIMK2P53671 638 aa8.51□□□□□ -1.05
SMG6-210ENST00000572205 DRG2P55039 364 aaKnown RBP8.51□□□□□ -1.05
SMG6-210ENST00000572205 GFERP55789 205 aa8.51□□□□□ -1.05
SMG6-210ENST00000572205 GABREP78334 506 aa8.51□□□□□ -1.05
SMG6-210ENST00000572205 PDE1BQ01064 536 aa8.51□□□□□ -1.05
SMG6-210ENST00000572205 HHEXQ03014 270 aa8.51□□□□□ -1.05
SMG6-210ENST00000572205 KIR2DS5Q14953 304 aa8.51□□□□□ -1.05
SMG6-210ENST00000572205 INSCQ1MX18 579 aa8.51□□□□□ -1.05
SMG6-210ENST00000572205 TSNAXIP1Q2TAA8 658 aa8.51□□□□□ -1.05
SMG6-210ENST00000572205 GPR33Q49SQ1 333 aa8.51□□□□□ -1.05
SMG6-210ENST00000572205 C3orf38Q5JPI3 329 aa8.51□□□□□ -1.05
SMG6-210ENST00000572205 METRNLQ641Q3 311 aa8.51□□□□□ -1.05
SMG6-210ENST00000572205 CAPRIN2Q6IMN6 1127 aaKnown RBP8.51□□□□□ -1.05
SMG6-210ENST00000572205 CCDC70Q6NSX1 233 aa8.51□□□□□ -1.05
SMG6-210ENST00000572205 DET1Q7L5Y6 550 aa8.51□□□□□ -1.05
SMG6-210ENST00000572205 LINC00523Q86TU6 105 aa8.51□□□□□ -1.05
SMG6-210ENST00000572205 TRAPPC5Q8IUR0 188 aa8.51□□□□□ -1.05
SMG6-210ENST00000572205 SPNS2Q8IVW8 549 aa8.51□□□□□ -1.05
SMG6-210ENST00000572205 CLDN19Q8N6F1 224 aa8.51□□□□□ -1.05
SMG6-210ENST00000572205 NAT8LQ8N9F0 302 aa8.51□□□□□ -1.05
SMG6-210ENST00000572205 Q8N9G6 341 aaPredicted RBP8.51□□□□□ -1.05
SMG6-210ENST00000572205 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.51□□□□□ -1.05
SMG6-210ENST00000572205 OR2L2Q8NH16 312 aa8.51□□□□□ -1.05
SMG6-210ENST00000572205 SREK1Q8WXA9 508 aaKnown RBP8.51□□□□□ -1.05
SMG6-210ENST00000572205 RSC1A1Q92681 617 aa8.51□□□□□ -1.05
SMG6-210ENST00000572205 PEX13Q92968 403 aa8.51□□□□□ -1.05
SMG6-210ENST00000572205 SLC46A1Q96NT5 459 aa8.51□□□□□ -1.05
SMG6-210ENST00000572205 GFM1Q96RP9 751 aaKnown RBP8.51□□□□□ -1.05
SMG6-210ENST00000572205 FERMT1Q9BQL6 677 aa8.51□□□□□ -1.05
SMG6-210ENST00000572205 KIFC1Q9BW19 673 aa8.51□□□□□ -1.05
SMG6-210ENST00000572205 TBC1D10AQ9BXI6 508 aa8.51□□□□□ -1.05
SMG6-210ENST00000572205 OR52A5Q9H2C5 316 aa8.51□□□□□ -1.05
SMG6-210ENST00000572205 SLC40A1Q9NP59 571 aa8.51□□□□□ -1.05
SMG6-210ENST00000572205 ZDHHC3Q9NYG2 299 aa8.51□□□□□ -1.05
SMG6-210ENST00000572205 ACSL6Q9UKU0 697 aa8.51□□□□□ -1.05
SMG6-210ENST00000572205 CDYLQ9Y232 598 aa8.51□□□□□ -1.05
SMG6-210ENST00000572205 DNAJC16Q9Y2G8 782 aa8.51□□□□□ -1.05
SMG6-210ENST00000572205 PIEZO2Q9H5I5 2752 aa8.51□□□□□ -1.05
SMG6-210ENST00000572205 TLN1Q9Y490 2541 aaKnown RBP8.51□□□□□ -1.05
SMG6-210ENST00000572205 TRBV23OR9-2A0A075B6M9 112 aa8.5□□□□□ -1.05
SMG6-210ENST00000572205 CCDC187A0A096LP49 1063 aa8.5□□□□□ -1.05
SMG6-210ENST00000572205 HEATR9A2RTY3 570 aa8.5□□□□□ -1.05
SMG6-210ENST00000572205 MGAT4DA6NG13 374 aa8.5□□□□□ -1.05
SMG6-210ENST00000572205 C9orf172C9J069 976 aa8.5□□□□□ -1.05
SMG6-210ENST00000572205 PSMD3O43242 534 aa8.5□□□□□ -1.05
SMG6-210ENST00000572205 OR1I1O60431 355 aa8.5□□□□□ -1.05
SMG6-210ENST00000572205 AVILO75366 819 aa8.5□□□□□ -1.05
SMG6-210ENST00000572205 POP7O75817 140 aaKnown RBP8.5□□□□□ -1.05
SMG6-210ENST00000572205 GOT2P00505 430 aaKnown RBP8.5□□□□□ -1.05
SMG6-210ENST00000572205 ITGA2BP08514 1039 aa8.5□□□□□ -1.05
SMG6-210ENST00000572205 TPBGLP0DKB5 382 aa8.5□□□□□ -1.05
SMG6-210ENST00000572205 ITIH1P19827 911 aa8.5□□□□□ -1.05
SMG6-210ENST00000572205 ITGALP20701 1170 aa8.5□□□□□ -1.05
SMG6-210ENST00000572205 ADRA1DP25100 572 aa8.5□□□□□ -1.05
SMG6-210ENST00000572205 NMBRP28336 390 aa8.5□□□□□ -1.05
SMG6-210ENST00000572205 HADHAP40939 763 aa8.5□□□□□ -1.05
SMG6-210ENST00000572205 CAPZBP47756 277 aa8.5□□□□□ -1.05
SMG6-210ENST00000572205 EPHA4P54764 986 aa8.5□□□□□ -1.05
SMG6-210ENST00000572205 INHBCP55103 352 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms