RNA–Protein interactions for RNA: ENST00000571043.5

RPAIN-208, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,547 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-208ENST00000571043 ZNF513Q8N8E2 541 aaPredicted RBP17.07■□□□□ 0.32
RPAIN-208ENST00000571043 FBXO27Q8NI29 283 aa17.07■□□□□ 0.32
RPAIN-208ENST00000571043 RP9Q8TA86 221 aaKnown RBP17.07■□□□□ 0.32
RPAIN-208ENST00000571043 ZNF483Q8TF39 744 aaPredicted RBP17.07■□□□□ 0.32
RPAIN-208ENST00000571043 NELL2Q99435 816 aa17.07■□□□□ 0.32
RPAIN-208ENST00000571043 COPS8Q99627 209 aa17.07■□□□□ 0.32
RPAIN-208ENST00000571043 RTKNQ9BST9 563 aa17.07■□□□□ 0.32
RPAIN-208ENST00000571043 DENND2DQ9H6A0 471 aaPredicted RBP17.07■□□□□ 0.32
RPAIN-208ENST00000571043 SPATS2LQ9NUQ6 558 aaKnown RBP17.07■□□□□ 0.32
RPAIN-208ENST00000571043 NFKBIL1Q9UBC1 381 aaPredicted RBP17.07■□□□□ 0.32
RPAIN-208ENST00000571043 CKAP5Q14008 2032 aa17.07■□□□□ 0.32
RPAIN-208ENST00000571043 RGSL1A5PLK6 1076 aa17.06■□□□□ 0.32
RPAIN-208ENST00000571043 AZIN1O14977 448 aa17.06■□□□□ 0.32
RPAIN-208ENST00000571043 SKAP2O75563 359 aaPredicted RBP17.06■□□□□ 0.32
RPAIN-208ENST00000571043 MLYCDO95822 493 aa17.06■□□□□ 0.32
RPAIN-208ENST00000571043 HK3P52790 923 aa17.06■□□□□ 0.32
RPAIN-208ENST00000571043 MRPS21P82921 87 aaKnown RBP17.06■□□□□ 0.32
RPAIN-208ENST00000571043 ZXDAP98168 799 aa17.06■□□□□ 0.32
RPAIN-208ENST00000571043 SEMG2Q02383 582 aa17.06■□□□□ 0.32
RPAIN-208ENST00000571043 TTLL9Q3SXZ7 439 aa17.06■□□□□ 0.32
RPAIN-208ENST00000571043 UGT3A2Q3SY77 523 aa17.06■□□□□ 0.32
RPAIN-208ENST00000571043 MYO1HQ8N1T3 1032 aa17.06■□□□□ 0.32
RPAIN-208ENST00000571043 ZBTB2Q8N680 514 aa17.06■□□□□ 0.32
RPAIN-208ENST00000571043 POU5F2Q8N7G0 328 aa17.06■□□□□ 0.32
RPAIN-208ENST00000571043 LKAAEAR1Q8TD35 194 aa17.06■□□□□ 0.32
RPAIN-208ENST00000571043 CCDC97Q96F63 343 aaPredicted RBP17.06■□□□□ 0.32
RPAIN-208ENST00000571043 LENG8Q96PV6 779 aaPredicted RBP17.06■□□□□ 0.32
RPAIN-208ENST00000571043 PANX3Q96QZ0 392 aa17.06■□□□□ 0.32
RPAIN-208ENST00000571043 ACOX2Q99424 681 aa17.06■□□□□ 0.32
RPAIN-208ENST00000571043 MID1IP1Q9NPA3 183 aa17.06■□□□□ 0.32
RPAIN-208ENST00000571043 SMOXQ9NWM0 555 aa17.06■□□□□ 0.32
RPAIN-208ENST00000571043 MRPS17Q9Y2R5 130 aaKnown RBP17.06■□□□□ 0.32
RPAIN-208ENST00000571043 KANSL1LA0AUZ9 987 aa17.06■□□□□ 0.32
RPAIN-208ENST00000571043 LRRC14BA6NHZ5 514 aa17.06■□□□□ 0.32
RPAIN-208ENST00000571043 TRIM16O95361 564 aa17.06■□□□□ 0.32
RPAIN-208ENST00000571043 CTSLP07711 333 aa17.06■□□□□ 0.32
RPAIN-208ENST00000571043 CBSLP0DN79 551 aa17.06■□□□□ 0.32
RPAIN-208ENST00000571043 CHRNB1P11230 501 aa17.06■□□□□ 0.32
RPAIN-208ENST00000571043 TSPAN8P19075 237 aa17.06■□□□□ 0.32
RPAIN-208ENST00000571043 CBSP35520 551 aa17.06■□□□□ 0.32
RPAIN-208ENST00000571043 TIE1P35590 1138 aa17.06■□□□□ 0.32
RPAIN-208ENST00000571043 IL12RB1P42701 662 aa17.06■□□□□ 0.32
RPAIN-208ENST00000571043 CDC16Q13042 620 aa17.06■□□□□ 0.32
RPAIN-208ENST00000571043 TGFBIQ15582 683 aa17.06■□□□□ 0.32
RPAIN-208ENST00000571043 ATP13A5Q4VNC0 1218 aa17.06■□□□□ 0.32
RPAIN-208ENST00000571043 FNDC3BQ53EP0 1204 aaKnown RBP17.06■□□□□ 0.32
RPAIN-208ENST00000571043 KANK2Q63ZY3 851 aa17.06■□□□□ 0.32
RPAIN-208ENST00000571043 SCUBE1Q8IWY4 988 aa17.06■□□□□ 0.32
RPAIN-208ENST00000571043 SIX5Q8N196 739 aa17.06■□□□□ 0.32
RPAIN-208ENST00000571043 CLDN19Q8N6F1 224 aa17.06■□□□□ 0.32
RPAIN-208ENST00000571043 TRPC4APQ8TEL6 797 aa17.06■□□□□ 0.32
RPAIN-208ENST00000571043 AGAP11Q8TF27 550 aa17.06■□□□□ 0.32
RPAIN-208ENST00000571043 CATSPER2Q96P56 530 aa17.06■□□□□ 0.32
RPAIN-208ENST00000571043 UHRF1Q96T88 793 aaPredicted RBP17.06■□□□□ 0.32
RPAIN-208ENST00000571043 ZBTB26Q9HCK0 441 aa17.06■□□□□ 0.32
RPAIN-208ENST00000571043 PCDH12Q9NPG4 1184 aa17.06■□□□□ 0.32
RPAIN-208ENST00000571043 CD274Q9NZQ7 290 aa17.06■□□□□ 0.32
RPAIN-208ENST00000571043 PCTPQ9UKL6 214 aa17.06■□□□□ 0.32
RPAIN-208ENST00000571043 NDRG2Q9UN36 371 aaKnown RBP17.06■□□□□ 0.32
RPAIN-208ENST00000571043 FIS1Q9Y3D6 152 aa17.06■□□□□ 0.32
RPAIN-208ENST00000571043 TNPO3Q9Y5L0 923 aaKnown RBP17.06■□□□□ 0.32
RPAIN-208ENST00000571043 TECTAO75443 2155 aa17.05■□□□□ 0.32
RPAIN-208ENST00000571043 LOC100653049A0A140TA62 436 aa17.05■□□□□ 0.32
RPAIN-208ENST00000571043 EIF3FO00303 357 aaPredicted RBP17.05■□□□□ 0.32
RPAIN-208ENST00000571043 KRT34O76011 436 aa17.05■□□□□ 0.32
RPAIN-208ENST00000571043 LMNAP02545 664 aaKnown RBP17.05■□□□□ 0.32
RPAIN-208ENST00000571043 SEC13P55735 322 aa17.05■□□□□ 0.32
RPAIN-208ENST00000571043 FZD5Q13467 585 aa17.05■□□□□ 0.32
RPAIN-208ENST00000571043 ZRSR2Q15696 482 aaKnown RBP17.05■□□□□ 0.32
RPAIN-208ENST00000571043 HNRNPA1L2Q32P51 320 aaKnown RBP17.05■□□□□ 0.32
RPAIN-208ENST00000571043 C2orf27AQ580R0 203 aa17.05■□□□□ 0.32
RPAIN-208ENST00000571043 TMEM198Q66K66 360 aa17.05■□□□□ 0.32
RPAIN-208ENST00000571043 SERPINA13PQ6UXR4 307 aa17.05■□□□□ 0.32
RPAIN-208ENST00000571043 DPPA4Q7L190 304 aa17.05■□□□□ 0.32
RPAIN-208ENST00000571043 EFL1Q7Z2Z2 1120 aaKnown RBP17.05■□□□□ 0.32
RPAIN-208ENST00000571043 SYNPOQ8N3V7 929 aa17.05■□□□□ 0.32
RPAIN-208ENST00000571043 C19orf60Q96EN9 201 aa17.05■□□□□ 0.32
RPAIN-208ENST00000571043 NSUN5Q96P11 429 aaKnown RBP17.05■□□□□ 0.32
RPAIN-208ENST00000571043 NUSAP1Q9BXS6 441 aaKnown RBP17.05■□□□□ 0.32
RPAIN-208ENST00000571043 FAM83DQ9H4H8 585 aa17.05■□□□□ 0.32
RPAIN-208ENST00000571043 LTB4R2Q9NPC1 389 aa17.05■□□□□ 0.32
RPAIN-208ENST00000571043 KCTD5Q9NXV2 234 aa17.05■□□□□ 0.32
RPAIN-208ENST00000571043 SUN2Q9UH99 717 aa17.05■□□□□ 0.32
RPAIN-208ENST00000571043 COPG1Q9Y678 874 aaKnown RBP17.05■□□□□ 0.32
RPAIN-208ENST00000571043 STON1Q9Y6Q2 735 aa17.05■□□□□ 0.32
RPAIN-208ENST00000571043 RAD51BO15315 384 aa17.04■□□□□ 0.32
RPAIN-208ENST00000571043 S100BP04271 92 aaPredicted RBP17.04■□□□□ 0.32
RPAIN-208ENST00000571043 OR56A5P0C7T3 313 aa17.04■□□□□ 0.32
RPAIN-208ENST00000571043 ITGB6P18564 788 aa17.04■□□□□ 0.32
RPAIN-208ENST00000571043 XPAP23025 273 aaPredicted RBP17.04■□□□□ 0.32
RPAIN-208ENST00000571043 NTSR1P30989 418 aa17.04■□□□□ 0.32
RPAIN-208ENST00000571043 ATP4BP51164 291 aa17.04■□□□□ 0.32
RPAIN-208ENST00000571043 CYLC2Q14093 348 aaPredicted RBP17.04■□□□□ 0.32
RPAIN-208ENST00000571043 SQLEQ14534 574 aa17.04■□□□□ 0.32
RPAIN-208ENST00000571043 PCBP2Q15366 365 aaKnown RBP eCLIP17.04■□□□□ 0.32
RPAIN-208ENST00000571043 ACSBG2Q5FVE4 666 aa17.04■□□□□ 0.32
RPAIN-208ENST00000571043 CLEC6AQ6EIG7 209 aa17.04■□□□□ 0.32
RPAIN-208ENST00000571043 SBSNQ6UWP8 590 aa17.04■□□□□ 0.32
RPAIN-208ENST00000571043 RFLNAQ6ZTI6 216 aa17.04■□□□□ 0.32
RPAIN-208ENST00000571043 FRA10AC1Q70Z53 315 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms