RNA–Protein interactions for RNA: ENST00000570883.5

RPAIN-207, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 953 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-207ENST00000570883 EPHA4P54764 986 aa13.14□□□□□ -0.31
RPAIN-207ENST00000570883 CDK16Q00536 496 aa13.14□□□□□ -0.31
RPAIN-207ENST00000570883 CCDC173Q0VFZ6 552 aa13.14□□□□□ -0.31
RPAIN-207ENST00000570883 EIF3IQ13347 325 aaKnown RBP13.14□□□□□ -0.31
RPAIN-207ENST00000570883 GPR18Q14330 331 aa13.14□□□□□ -0.31
RPAIN-207ENST00000570883 SEMA3AQ14563 771 aa13.14□□□□□ -0.31
RPAIN-207ENST00000570883 RPE65Q16518 533 aa13.14□□□□□ -0.31
RPAIN-207ENST00000570883 PAPD7Q5XG87 772 aaKnown RBP13.14□□□□□ -0.31
RPAIN-207ENST00000570883 DUS1LQ6P1R4 473 aaKnown RBP13.14□□□□□ -0.31
RPAIN-207ENST00000570883 LRRC8BQ6P9F7 803 aa13.14□□□□□ -0.31
RPAIN-207ENST00000570883 AFTPHQ6ULP2 937 aa13.14□□□□□ -0.31
RPAIN-207ENST00000570883 TRIM48Q8IWZ4 208 aa13.14□□□□□ -0.31
RPAIN-207ENST00000570883 C17orf53Q8N3J3 647 aaPredicted RBP13.14□□□□□ -0.31
RPAIN-207ENST00000570883 FBXO39Q8N4B4 442 aa13.14□□□□□ -0.31
RPAIN-207ENST00000570883 RCBTB1Q8NDN9 531 aa13.14□□□□□ -0.31
RPAIN-207ENST00000570883 PPHLN1Q8NEY8 458 aaKnown RBP13.14□□□□□ -0.31
RPAIN-207ENST00000570883 SPDYE1Q8NFV5 336 aaPredicted RBP13.14□□□□□ -0.31
RPAIN-207ENST00000570883 CPT1BQ92523 772 aa13.14□□□□□ -0.31
RPAIN-207ENST00000570883 FGF11Q92914 225 aa13.14□□□□□ -0.31
RPAIN-207ENST00000570883 PEX13Q92968 403 aa13.14□□□□□ -0.31
RPAIN-207ENST00000570883 SH3KBP1Q96B97 665 aa13.14□□□□□ -0.31
RPAIN-207ENST00000570883 RMDN2Q96LZ7 410 aa13.14□□□□□ -0.31
RPAIN-207ENST00000570883 ZNF578Q96N58 590 aaPredicted RBP13.14□□□□□ -0.31
RPAIN-207ENST00000570883 DCBLD2Q96PD2 775 aa13.14□□□□□ -0.31
RPAIN-207ENST00000570883 IL22Q9GZX6 179 aa13.14□□□□□ -0.31
RPAIN-207ENST00000570883 WWP1Q9H0M0 922 aa13.14□□□□□ -0.31
RPAIN-207ENST00000570883 SLC40A1Q9NP59 571 aa13.14□□□□□ -0.31
RPAIN-207ENST00000570883 TREX1Q9NSU2 369 aa13.14□□□□□ -0.31
RPAIN-207ENST00000570883 SYBUQ9NX95 663 aa13.14□□□□□ -0.31
RPAIN-207ENST00000570883 PDP2Q9P2J9 529 aa13.14□□□□□ -0.31
RPAIN-207ENST00000570883 LOXL2Q9Y4K0 774 aa13.14□□□□□ -0.31
RPAIN-207ENST00000570883 PRSS21Q9Y6M0 314 aa13.14□□□□□ -0.31
RPAIN-207ENST00000570883 IGSF10Q6WRI0 2623 aa13.14□□□□□ -0.31
RPAIN-207ENST00000570883 GOLGA6L10A0A0M3HER8 536 aa13.13□□□□□ -0.31
RPAIN-207ENST00000570883 TNFSF15O95150 251 aa13.13□□□□□ -0.31
RPAIN-207ENST00000570883 ITGA2BP08514 1039 aa13.13□□□□□ -0.31
RPAIN-207ENST00000570883 MTHFD1P11586 935 aaKnown RBP13.13□□□□□ -0.31
RPAIN-207ENST00000570883 ITIH1P19827 911 aa13.13□□□□□ -0.31
RPAIN-207ENST00000570883 ARNTP27540 789 aa13.13□□□□□ -0.31
RPAIN-207ENST00000570883 NMBRP28336 390 aa13.13□□□□□ -0.31
RPAIN-207ENST00000570883 EIF2S3P41091 472 aaKnown RBP13.13□□□□□ -0.31
RPAIN-207ENST00000570883 HALP42357 657 aa13.13□□□□□ -0.31
RPAIN-207ENST00000570883 MAPK9P45984 424 aa13.13□□□□□ -0.31
RPAIN-207ENST00000570883 ERVPABLB-1P60509 514 aa13.13□□□□□ -0.31
RPAIN-207ENST00000570883 LAMB3Q13751 1172 aa13.13□□□□□ -0.31
RPAIN-207ENST00000570883 ITIH4Q14624 930 aa13.13□□□□□ -0.31
RPAIN-207ENST00000570883 PCID2Q5JVF3 399 aa13.13□□□□□ -0.31
RPAIN-207ENST00000570883 TMEM71Q6P5X7 295 aa13.13□□□□□ -0.31
RPAIN-207ENST00000570883 WDR74Q6RFH5 385 aaPredicted RBP13.13□□□□□ -0.31
RPAIN-207ENST00000570883 PACS1Q6VY07 963 aa13.13□□□□□ -0.31
RPAIN-207ENST00000570883 NLRP9Q7RTR0 991 aa13.13□□□□□ -0.31
RPAIN-207ENST00000570883 CLEC14AQ86T13 490 aa13.13□□□□□ -0.31
RPAIN-207ENST00000570883 CAND1Q86VP6 1230 aaKnown RBP13.13□□□□□ -0.31
RPAIN-207ENST00000570883 LSMEM2Q8N112 164 aa13.13□□□□□ -0.31
RPAIN-207ENST00000570883 HM13Q8TCT9 377 aa13.13□□□□□ -0.31
RPAIN-207ENST00000570883 HEXDCQ8WVB3 486 aa13.13□□□□□ -0.31
RPAIN-207ENST00000570883 CXorf40BQ96DE9 158 aa13.13□□□□□ -0.31
RPAIN-207ENST00000570883 AHCYL2Q96HN2 611 aaKnown RBP13.13□□□□□ -0.31
RPAIN-207ENST00000570883 NAPGQ99747 312 aaPredicted RBP13.13□□□□□ -0.31
RPAIN-207ENST00000570883 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.13□□□□□ -0.31
RPAIN-207ENST00000570883 DDX47Q9H0S4 455 aaKnown RBP13.13□□□□□ -0.31
RPAIN-207ENST00000570883 MARCH4Q9P2E8 410 aaPredicted RBP13.13□□□□□ -0.31
RPAIN-207ENST00000570883 PISDQ9UG56 409 aa13.13□□□□□ -0.31
RPAIN-207ENST00000570883 CFAP20Q9Y6A4 193 aaKnown RBP13.13□□□□□ -0.31
RPAIN-207ENST00000570883 ATMQ13315 3056 aa13.13□□□□□ -0.31
RPAIN-207ENST00000570883 MN1Q10571 1320 aaPredicted RBP13.13□□□□□ -0.31
RPAIN-207ENST00000570883 KLHL33A6NCF5 533 aa13.12□□□□□ -0.31
RPAIN-207ENST00000570883 HGSO14964 777 aaPredicted RBP13.12□□□□□ -0.31
RPAIN-207ENST00000570883 OR1I1O60431 355 aa13.12□□□□□ -0.31
RPAIN-207ENST00000570883 AVILO75366 819 aa13.12□□□□□ -0.31
RPAIN-207ENST00000570883 AP2A2O94973 939 aa13.12□□□□□ -0.31
RPAIN-207ENST00000570883 POLBP06746 335 aa13.12□□□□□ -0.31
RPAIN-207ENST00000570883 CCL4P13236 92 aa13.12□□□□□ -0.31
RPAIN-207ENST00000570883 TYRP1P17643 537 aa13.12□□□□□ -0.31
RPAIN-207ENST00000570883 RBMS1P29558 406 aaKnown RBP13.12□□□□□ -0.31
RPAIN-207ENST00000570883 MLLT3P42568 568 aaPredicted RBP13.12□□□□□ -0.31
RPAIN-207ENST00000570883 NPY2RP49146 381 aa13.12□□□□□ -0.31
RPAIN-207ENST00000570883 GFERP55789 205 aa13.12□□□□□ -0.31
RPAIN-207ENST00000570883 PRAMEP78395 509 aa13.12□□□□□ -0.31
RPAIN-207ENST00000570883 TRA2AQ13595 282 aaKnown RBP eCLIP13.12□□□□□ -0.31
RPAIN-207ENST00000570883 CAPRIN2Q6IMN6 1127 aaKnown RBP13.12□□□□□ -0.31
RPAIN-207ENST00000570883 CREG2Q8IUH2 290 aa13.12□□□□□ -0.31
RPAIN-207ENST00000570883 CFAP206Q8IYR0 622 aa13.12□□□□□ -0.31
RPAIN-207ENST00000570883 MPP5Q8N3R9 675 aa13.12□□□□□ -0.31
RPAIN-207ENST00000570883 OR6P1Q8NGX9 317 aa13.12□□□□□ -0.31
RPAIN-207ENST00000570883 OR4L1Q8NH43 312 aa13.12□□□□□ -0.31
RPAIN-207ENST00000570883 JPH3Q8WXH2 748 aaPredicted RBP13.12□□□□□ -0.31
RPAIN-207ENST00000570883 NCSTNQ92542 709 aa13.12□□□□□ -0.31
RPAIN-207ENST00000570883 RSC1A1Q92681 617 aa13.12□□□□□ -0.31
RPAIN-207ENST00000570883 TMEM159Q96B96 161 aa13.12□□□□□ -0.31
RPAIN-207ENST00000570883 SGSM3Q96HU1 749 aa13.12□□□□□ -0.31
RPAIN-207ENST00000570883 CAPZA3Q96KX2 299 aa13.12□□□□□ -0.31
RPAIN-207ENST00000570883 INSM2Q96T92 566 aaPredicted RBP13.12□□□□□ -0.31
RPAIN-207ENST00000570883 DPYSL5Q9BPU6 564 aa13.12□□□□□ -0.31
RPAIN-207ENST00000570883 TRIM56Q9BRZ2 755 aaKnown RBP13.12□□□□□ -0.31
RPAIN-207ENST00000570883 CCM2Q9BSQ5 444 aa13.12□□□□□ -0.31
RPAIN-207ENST00000570883 KIFC1Q9BW19 673 aa13.12□□□□□ -0.31
RPAIN-207ENST00000570883 ZMYND15Q9H091 742 aa13.12□□□□□ -0.31
RPAIN-207ENST00000570883 COG4Q9H9E3 785 aa13.12□□□□□ -0.31
RPAIN-207ENST00000570883 THSD1Q9NS62 852 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms