RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 ARHGEF18Q6ZSZ5 1173 aa12.13□□□□□ -0.47
CTDNEP1-205ENST00000570828 ZNF605Q86T29 641 aa12.13□□□□□ -0.47
CTDNEP1-205ENST00000570828 GAS2L3Q86XJ1 694 aa12.13□□□□□ -0.47
CTDNEP1-205ENST00000570828 OR4K2Q8NGD2 314 aa12.13□□□□□ -0.47
CTDNEP1-205ENST00000570828 ZNF398Q8TD17 642 aa12.13□□□□□ -0.47
CTDNEP1-205ENST00000570828 NKD1Q969G9 470 aa12.13□□□□□ -0.47
CTDNEP1-205ENST00000570828 RTP4Q96DX8 246 aa12.13□□□□□ -0.47
CTDNEP1-205ENST00000570828 MED8Q96G25 268 aa12.13□□□□□ -0.47
CTDNEP1-205ENST00000570828 ZNF514Q96K75 400 aaPredicted RBP12.13□□□□□ -0.47
CTDNEP1-205ENST00000570828 C9orf72Q96LT7 481 aa12.13□□□□□ -0.47
CTDNEP1-205ENST00000570828 SPSB2Q99619 263 aa12.13□□□□□ -0.47
CTDNEP1-205ENST00000570828 CTRCQ99895 268 aa12.13□□□□□ -0.47
CTDNEP1-205ENST00000570828 TBL1YQ9BQ87 522 aa12.13□□□□□ -0.47
CTDNEP1-205ENST00000570828 ARHGAP9Q9BRR9 750 aa12.13□□□□□ -0.47
CTDNEP1-205ENST00000570828 DESI2Q9BSY9 194 aa12.13□□□□□ -0.47
CTDNEP1-205ENST00000570828 SLC40A1Q9NP59 571 aa12.13□□□□□ -0.47
CTDNEP1-205ENST00000570828 OGFRQ9NZT2 677 aa12.13□□□□□ -0.47
CTDNEP1-205ENST00000570828 IMPACTQ9P2X3 320 aa12.13□□□□□ -0.47
CTDNEP1-205ENST00000570828 FKBPLQ9UIM3 349 aa12.13□□□□□ -0.47
CTDNEP1-205ENST00000570828 SLC30A1Q9Y6M5 507 aa12.13□□□□□ -0.47
CTDNEP1-205ENST00000570828 GOLGA6L6A8MZA4 724 aa12.12□□□□□ -0.47
CTDNEP1-205ENST00000570828 POLR1CO15160 346 aaPredicted RBP12.12□□□□□ -0.47
CTDNEP1-205ENST00000570828 CAPN5O15484 640 aaPredicted RBP12.12□□□□□ -0.47
CTDNEP1-205ENST00000570828 POP7O75817 140 aaKnown RBP12.12□□□□□ -0.47
CTDNEP1-205ENST00000570828 SRP72O76094 671 aaKnown RBP12.12□□□□□ -0.47
CTDNEP1-205ENST00000570828 FTCDO95954 541 aa12.12□□□□□ -0.47
CTDNEP1-205ENST00000570828 C9P02748 559 aa12.12□□□□□ -0.47
CTDNEP1-205ENST00000570828 WT1P19544 449 aaPredicted RBP12.12□□□□□ -0.47
CTDNEP1-205ENST00000570828 CDC25BP30305 580 aa12.12□□□□□ -0.47
CTDNEP1-205ENST00000570828 SMCPP49901 116 aaPredicted RBP12.12□□□□□ -0.47
CTDNEP1-205ENST00000570828 CLCA4Q14CN2 919 aa12.12□□□□□ -0.47
CTDNEP1-205ENST00000570828 PLCL1Q15111 1095 aa12.12□□□□□ -0.47
CTDNEP1-205ENST00000570828 FNBP1LQ5T0N5 605 aa12.12□□□□□ -0.47
CTDNEP1-205ENST00000570828 DET1Q7L5Y6 550 aa12.12□□□□□ -0.47
CTDNEP1-205ENST00000570828 TMEM139Q8IV31 216 aa12.12□□□□□ -0.47
CTDNEP1-205ENST00000570828 SPC24Q8NBT2 197 aa12.12□□□□□ -0.47
CTDNEP1-205ENST00000570828 RSC1A1Q92681 617 aa12.12□□□□□ -0.47
CTDNEP1-205ENST00000570828 EXTL1Q92935 676 aa12.12□□□□□ -0.47
CTDNEP1-205ENST00000570828 KIAA1143Q96AT1 154 aaPredicted RBP12.12□□□□□ -0.47
CTDNEP1-205ENST00000570828 DCUN1D1Q96GG9 259 aa12.12□□□□□ -0.47
CTDNEP1-205ENST00000570828 ZDHHC12Q96GR4 267 aa12.12□□□□□ -0.47
CTDNEP1-205ENST00000570828 SEMA4CQ9C0C4 833 aa12.12□□□□□ -0.47
CTDNEP1-205ENST00000570828 ASB8Q9H765 288 aa12.12□□□□□ -0.47
CTDNEP1-205ENST00000570828 FBXO8Q9NRD0 319 aa12.12□□□□□ -0.47
CTDNEP1-205ENST00000570828 FEZ2Q9UHY8 353 aaPredicted RBP12.12□□□□□ -0.47
CTDNEP1-205ENST00000570828 CRLS1Q9UJA2 301 aa12.12□□□□□ -0.47
CTDNEP1-205ENST00000570828 PACSIN2Q9UNF0 486 aaPredicted RBP12.12□□□□□ -0.47
CTDNEP1-205ENST00000570828 PSMD13Q9UNM6 376 aa12.12□□□□□ -0.47
CTDNEP1-205ENST00000570828 WDR37Q9Y2I8 494 aa12.12□□□□□ -0.47
CTDNEP1-205ENST00000570828 DNMT3AQ9Y6K1 912 aaPredicted RBP12.12□□□□□ -0.47
CTDNEP1-205ENST00000570828 SCN8AQ9UQD0 1980 aa12.12□□□□□ -0.47
CTDNEP1-205ENST00000570828 KLHL33A6NCF5 533 aa12.11□□□□□ -0.47
CTDNEP1-205ENST00000570828 CFAP99D6REC4 459 aa12.11□□□□□ -0.47
CTDNEP1-205ENST00000570828 TOX3O15405 576 aaPredicted RBP12.11□□□□□ -0.47
CTDNEP1-205ENST00000570828 STK17BO94768 372 aa12.11□□□□□ -0.47
CTDNEP1-205ENST00000570828 RALBP11234 206 aa12.11□□□□□ -0.47
CTDNEP1-205ENST00000570828 LIFP15018 202 aa12.11□□□□□ -0.47
CTDNEP1-205ENST00000570828 ITGALP20701 1170 aa12.11□□□□□ -0.47
CTDNEP1-205ENST00000570828 CA5AP35218 305 aa12.11□□□□□ -0.47
CTDNEP1-205ENST00000570828 HADHAP40939 763 aa12.11□□□□□ -0.47
CTDNEP1-205ENST00000570828 LEPRP48357 1165 aaKnown RBP12.11□□□□□ -0.47
CTDNEP1-205ENST00000570828 SEPHS1P49903 392 aa12.11□□□□□ -0.47
CTDNEP1-205ENST00000570828 ZNF140P52738 457 aaPredicted RBP12.11□□□□□ -0.47
CTDNEP1-205ENST00000570828 CYP4F2P78329 520 aa12.11□□□□□ -0.47
CTDNEP1-205ENST00000570828 FOXM1Q08050 763 aa12.11□□□□□ -0.47
CTDNEP1-205ENST00000570828 NFE2L1Q14494 772 aa12.11□□□□□ -0.47
CTDNEP1-205ENST00000570828 SPARCL1Q14515 664 aa12.11□□□□□ -0.47
CTDNEP1-205ENST00000570828 RPE65Q16518 533 aa12.11□□□□□ -0.47
CTDNEP1-205ENST00000570828 P3H1Q32P28 736 aa12.11□□□□□ -0.47
CTDNEP1-205ENST00000570828 IRGCQ6NXR0 463 aa12.11□□□□□ -0.47
CTDNEP1-205ENST00000570828 KLHL35Q6PF15 583 aa12.11□□□□□ -0.47
CTDNEP1-205ENST00000570828 XKR5Q6UX68 686 aa12.11□□□□□ -0.47
CTDNEP1-205ENST00000570828 PRSS42Q7Z5A4 293 aa12.11□□□□□ -0.47
CTDNEP1-205ENST00000570828 NLGN4XQ8N0W4 816 aa12.11□□□□□ -0.47
CTDNEP1-205ENST00000570828 BEND7Q8N7W2 519 aaPredicted RBP12.11□□□□□ -0.47
CTDNEP1-205ENST00000570828 FAM71DQ8N9W8 422 aa12.11□□□□□ -0.47
CTDNEP1-205ENST00000570828 NLGN4YQ8NFZ3 816 aaPredicted RBP12.11□□□□□ -0.47
CTDNEP1-205ENST00000570828 ULK4Q96C45 1275 aa12.11□□□□□ -0.47
CTDNEP1-205ENST00000570828 ZNF768Q9H5H4 540 aaKnown RBP12.11□□□□□ -0.47
CTDNEP1-205ENST00000570828 APMAPQ9HDC9 416 aa12.11□□□□□ -0.47
CTDNEP1-205ENST00000570828 IMP3Q9NV31 184 aaKnown RBP12.11□□□□□ -0.47
CTDNEP1-205ENST00000570828 SIDT1Q9NXL6 827 aaKnown RBP12.11□□□□□ -0.47
CTDNEP1-205ENST00000570828 FAM8A1Q9UBU6 413 aa12.11□□□□□ -0.47
CTDNEP1-205ENST00000570828 PILRAQ9UKJ1 303 aa12.11□□□□□ -0.47
CTDNEP1-205ENST00000570828 KCTD3Q9Y597 815 aa12.11□□□□□ -0.47
CTDNEP1-205ENST00000570828 BOD1L1Q8NFC6 3051 aa12.11□□□□□ -0.47
CTDNEP1-205ENST00000570828 SPTA1P02549 2419 aa12.1□□□□□ -0.47
CTDNEP1-205ENST00000570828 MGAT4DA6NG13 374 aa12.1□□□□□ -0.47
CTDNEP1-205ENST00000570828 SLC35G4P0C7Q5 338 aa12.1□□□□□ -0.47
CTDNEP1-205ENST00000570828 MTHFD1P11586 935 aaKnown RBP12.1□□□□□ -0.47
CTDNEP1-205ENST00000570828 PLA2G2AP14555 144 aa12.1□□□□□ -0.47
CTDNEP1-205ENST00000570828 MAP4P27816 1152 aaKnown RBP12.1□□□□□ -0.47
CTDNEP1-205ENST00000570828 TMPRSS15P98073 1019 aa12.1□□□□□ -0.47
CTDNEP1-205ENST00000570828 PARP6Q2NL67 630 aa12.1□□□□□ -0.47
CTDNEP1-205ENST00000570828 BCL7AQ4VC05 210 aa12.1□□□□□ -0.47
CTDNEP1-205ENST00000570828 CACHD1Q5VU97 1274 aa12.1□□□□□ -0.47
CTDNEP1-205ENST00000570828 FAM83HQ6ZRV2 1179 aaPredicted RBP12.1□□□□□ -0.47
CTDNEP1-205ENST00000570828 FAM92BQ6ZTR7 304 aa12.1□□□□□ -0.47
CTDNEP1-205ENST00000570828 OR13C4Q8NGS5 318 aa12.1□□□□□ -0.47
CTDNEP1-205ENST00000570828 GPR150Q8NGU9 434 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms