RNA–Protein interactions for RNA: ENST00000570659.5

SMG6-205, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-205ENST00000570659 TLCD2A6NGC4 264 aa6.99□□□□□ -1.29
SMG6-205ENST00000570659 OR5K4A6NMS3 321 aa6.99□□□□□ -1.29
SMG6-205ENST00000570659 BTN3A3O00478 584 aa6.99□□□□□ -1.29
SMG6-205ENST00000570659 SOCS6O14544 535 aa6.99□□□□□ -1.29
SMG6-205ENST00000570659 ZNF749O43361 778 aa6.99□□□□□ -1.29
SMG6-205ENST00000570659 GADD45BO75293 160 aaPredicted RBP6.99□□□□□ -1.29
SMG6-205ENST00000570659 SMC2O95347 1197 aa6.99□□□□□ -1.29
SMG6-205ENST00000570659 CD99P14209 185 aa6.99□□□□□ -1.29
SMG6-205ENST00000570659 POLR2CP19387 275 aaPredicted RBP6.99□□□□□ -1.29
SMG6-205ENST00000570659 VARSP26640 1264 aaKnown RBP6.99□□□□□ -1.29
SMG6-205ENST00000570659 CA7P43166 264 aa6.99□□□□□ -1.29
SMG6-205ENST00000570659 MMP13P45452 471 aa6.99□□□□□ -1.29
SMG6-205ENST00000570659 GSCP56915 257 aaPredicted RBP6.99□□□□□ -1.29
SMG6-205ENST00000570659 SOX8P57073 446 aa6.99□□□□□ -1.29
SMG6-205ENST00000570659 JAM2P57087 298 aa6.99□□□□□ -1.29
SMG6-205ENST00000570659 SNX16P57768 344 aa6.99□□□□□ -1.29
SMG6-205ENST00000570659 ACY1Q03154 408 aa6.99□□□□□ -1.29
SMG6-205ENST00000570659 MMRN1Q13201 1228 aa6.99□□□□□ -1.29
SMG6-205ENST00000570659 NFE2L1Q14494 772 aa6.99□□□□□ -1.29
SMG6-205ENST00000570659 RFTN1Q14699 578 aaPredicted RBP6.99□□□□□ -1.29
SMG6-205ENST00000570659 ZNF169Q14929 603 aaPredicted RBP6.99□□□□□ -1.29
SMG6-205ENST00000570659 NOMO1Q15155 1222 aa6.99□□□□□ -1.29
SMG6-205ENST00000570659 CLEC16AQ2KHT3 1053 aa6.99□□□□□ -1.29
SMG6-205ENST00000570659 SMTNL2Q2TAL5 461 aa6.99□□□□□ -1.29
SMG6-205ENST00000570659 PPP6R3Q5H9R7 873 aaPredicted RBP6.99□□□□□ -1.29
SMG6-205ENST00000570659 DNTTIP2Q5QJE6 756 aaKnown RBP6.99□□□□□ -1.29
SMG6-205ENST00000570659 AGAP9Q5VTM2 703 aa6.99□□□□□ -1.29
SMG6-205ENST00000570659 TRIM72Q6ZMU5 477 aa6.99□□□□□ -1.29
SMG6-205ENST00000570659 LINC00696Q6ZRV3 163 aa6.99□□□□□ -1.29
SMG6-205ENST00000570659 SHISA6Q6ZSJ9 500 aa6.99□□□□□ -1.29
SMG6-205ENST00000570659 TRIM73Q86UV7 250 aa6.99□□□□□ -1.29
SMG6-205ENST00000570659 HPS6Q86YV9 775 aa6.99□□□□□ -1.29
SMG6-205ENST00000570659 ZADH2Q8N4Q0 377 aa6.99□□□□□ -1.29
SMG6-205ENST00000570659 ZNF808Q8N4W9 903 aaPredicted RBP6.99□□□□□ -1.29
SMG6-205ENST00000570659 TEX26Q8N6G2 289 aa6.99□□□□□ -1.29
SMG6-205ENST00000570659 C3orf20Q8ND61 904 aa6.99□□□□□ -1.29
SMG6-205ENST00000570659 LPCAT1Q8NF37 534 aa6.99□□□□□ -1.29
SMG6-205ENST00000570659 DNAJB14Q8TBM8 379 aa6.99□□□□□ -1.29
SMG6-205ENST00000570659 ZDHHC19Q8WVZ1 309 aaPredicted RBP6.99□□□□□ -1.29
SMG6-205ENST00000570659 SEC14L1Q92503 715 aa6.99□□□□□ -1.29
SMG6-205ENST00000570659 CLIP3Q96DZ5 547 aa6.99□□□□□ -1.29
SMG6-205ENST00000570659 INSM2Q96T92 566 aaPredicted RBP6.99□□□□□ -1.29
SMG6-205ENST00000570659 TRIM56Q9BRZ2 755 aaKnown RBP6.99□□□□□ -1.29
SMG6-205ENST00000570659 FAM83DQ9H4H8 585 aa6.99□□□□□ -1.29
SMG6-205ENST00000570659 STN1Q9H668 368 aaKnown RBP6.99□□□□□ -1.29
SMG6-205ENST00000570659 ACTR5Q9H9F9 607 aaPredicted RBP6.99□□□□□ -1.29
SMG6-205ENST00000570659 LATS2Q9NRM7 1088 aa6.99□□□□□ -1.29
SMG6-205ENST00000570659 AGPAT4Q9NRZ5 378 aa6.99□□□□□ -1.29
SMG6-205ENST00000570659 POT1Q9NUX5 634 aa6.99□□□□□ -1.29
SMG6-205ENST00000570659 OLAHQ9NV23 265 aa6.99□□□□□ -1.29
SMG6-205ENST00000570659 ADAM22Q9P0K1 906 aa6.99□□□□□ -1.29
SMG6-205ENST00000570659 DHCR7Q9UBM7 475 aaKnown RBP6.99□□□□□ -1.29
SMG6-205ENST00000570659 FBXL4Q9UKA2 621 aa6.99□□□□□ -1.29
SMG6-205ENST00000570659 SHOC2Q9UQ13 582 aa6.99□□□□□ -1.29
SMG6-205ENST00000570659 SPO11Q9Y5K1 396 aa6.99□□□□□ -1.29
SMG6-205ENST00000570659 HCFC1P51610 2035 aa6.99□□□□□ -1.29
SMG6-205ENST00000570659 CPAMD8Q8IZJ3 1885 aa6.98□□□□□ -1.29
SMG6-205ENST00000570659 A0A1B0GUH1 482 aa6.98□□□□□ -1.29
SMG6-205ENST00000570659 UNC5CO95185 931 aa6.98□□□□□ -1.29
SMG6-205ENST00000570659 MED26O95402 600 aa6.98□□□□□ -1.29
SMG6-205ENST00000570659 GNA14O95837 355 aa6.98□□□□□ -1.29
SMG6-205ENST00000570659 SLC4A1P02730 911 aa6.98□□□□□ -1.29
SMG6-205ENST00000570659 HLA-DQB2P05538 268 aa6.98□□□□□ -1.29
SMG6-205ENST00000570659 CD48P09326 243 aa6.98□□□□□ -1.29
SMG6-205ENST00000570659 MIPP30301 263 aa6.98□□□□□ -1.29
SMG6-205ENST00000570659 PBX1P40424 430 aa6.98□□□□□ -1.29
SMG6-205ENST00000570659 IST1P53990 364 aa6.98□□□□□ -1.29
SMG6-205ENST00000570659 RRADP55042 308 aa6.98□□□□□ -1.29
SMG6-205ENST00000570659 CSNK1G2P78368 415 aa6.98□□□□□ -1.29
SMG6-205ENST00000570659 FOXD4Q12950 439 aaPredicted RBP6.98□□□□□ -1.29
SMG6-205ENST00000570659 PEX6Q13608 980 aa6.98□□□□□ -1.29
SMG6-205ENST00000570659 MLIPQ5VWP3 458 aa6.98□□□□□ -1.29
SMG6-205ENST00000570659 MRPL14Q6P1L8 145 aaKnown RBP6.98□□□□□ -1.29
SMG6-205ENST00000570659 PHF13Q86YI8 300 aaPredicted RBP6.98□□□□□ -1.29
SMG6-205ENST00000570659 CHERPQ8IWX8 916 aaKnown RBP6.98□□□□□ -1.29
SMG6-205ENST00000570659 RASGEF1AQ8N9B8 481 aa6.98□□□□□ -1.29
SMG6-205ENST00000570659 LMNTD1Q8N9Z9 388 aa6.98□□□□□ -1.29
SMG6-205ENST00000570659 PPP4R1Q8TF05 950 aa6.98□□□□□ -1.29
SMG6-205ENST00000570659 PSMF1Q92530 271 aa6.98□□□□□ -1.29
SMG6-205ENST00000570659 CXorf40BQ96DE9 158 aa6.98□□□□□ -1.29
SMG6-205ENST00000570659 RMDN2Q96LZ7 410 aa6.98□□□□□ -1.29
SMG6-205ENST00000570659 GBP5Q96PP8 586 aa6.98□□□□□ -1.29
SMG6-205ENST00000570659 TREX2Q9BQ50 279 aaPredicted RBP6.98□□□□□ -1.29
SMG6-205ENST00000570659 CNPY3Q9BT09 278 aa6.98□□□□□ -1.29
SMG6-205ENST00000570659 SELENOOQ9BVL4 669 aa6.98□□□□□ -1.29
SMG6-205ENST00000570659 NDST4Q9H3R1 872 aa6.98□□□□□ -1.29
SMG6-205ENST00000570659 RMI1Q9H9A7 625 aa6.98□□□□□ -1.29
SMG6-205ENST00000570659 MCCC2Q9HCC0 563 aa6.98□□□□□ -1.29
SMG6-205ENST00000570659 TRIM39Q9HCM9 518 aa6.98□□□□□ -1.29
SMG6-205ENST00000570659 NPDC1Q9NQX5 325 aaPredicted RBP6.98□□□□□ -1.29
SMG6-205ENST00000570659 HRASLS2Q9NWW9 162 aa6.98□□□□□ -1.29
SMG6-205ENST00000570659 CSPG4Q6UVK1 2322 aa6.98□□□□□ -1.29
SMG6-205ENST00000570659 STAB1Q9NY15 2570 aa6.97□□□□□ -1.29
SMG6-205ENST00000570659 UBA6A0AVT1 1052 aaPredicted RBP6.97□□□□□ -1.29
SMG6-205ENST00000570659 BICDL2A1A5D9 508 aa6.97□□□□□ -1.29
SMG6-205ENST00000570659 GAPDHSO14556 408 aaPredicted RBP6.97□□□□□ -1.29
SMG6-205ENST00000570659 ADAM10O14672 748 aa6.97□□□□□ -1.29
SMG6-205ENST00000570659 SGTAO43765 313 aa6.97□□□□□ -1.29
SMG6-205ENST00000570659 MFSD11O43934 449 aa6.97□□□□□ -1.29
SMG6-205ENST00000570659 SLC25A14O95258 325 aaPredicted RBP6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms