RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 HMGB1P1B2RPK0 211 aaPredicted RBP6.48□□□□□ -1.37
CTDNEP1-204ENST00000570484 COPEO14579 308 aa6.48□□□□□ -1.37
CTDNEP1-204ENST00000570484 MAP2K7O14733 419 aa6.48□□□□□ -1.37
CTDNEP1-204ENST00000570484 TNFRSF10CO14798 259 aa6.48□□□□□ -1.37
CTDNEP1-204ENST00000570484 KMOO15229 486 aa6.48□□□□□ -1.37
CTDNEP1-204ENST00000570484 PHGDHO43175 533 aaKnown RBP6.48□□□□□ -1.37
CTDNEP1-204ENST00000570484 GRID2O43424 1007 aa6.48□□□□□ -1.37
CTDNEP1-204ENST00000570484 NUAK1O60285 661 aa6.48□□□□□ -1.37
CTDNEP1-204ENST00000570484 GLRA3O75311 464 aa6.48□□□□□ -1.37
CTDNEP1-204ENST00000570484 NIPSNAP2O75323 286 aa6.48□□□□□ -1.37
CTDNEP1-204ENST00000570484 RASGRP1O95267 797 aa6.48□□□□□ -1.37
CTDNEP1-204ENST00000570484 C1QAP02745 245 aa6.48□□□□□ -1.37
CTDNEP1-204ENST00000570484 CFIP05156 583 aa6.48□□□□□ -1.37
CTDNEP1-204ENST00000570484 MPOP05164 745 aa6.48□□□□□ -1.37
CTDNEP1-204ENST00000570484 HOXC4P09017 264 aaPredicted RBP6.48□□□□□ -1.37
CTDNEP1-204ENST00000570484 SLC35G4P0C7Q5 338 aa6.48□□□□□ -1.37
CTDNEP1-204ENST00000570484 ACP5P13686 325 aa6.48□□□□□ -1.37
CTDNEP1-204ENST00000570484 CTSEP14091 401 aa6.48□□□□□ -1.37
CTDNEP1-204ENST00000570484 ZNF8P17098 575 aaPredicted RBP6.48□□□□□ -1.37
CTDNEP1-204ENST00000570484 FDXRP22570 491 aa6.48□□□□□ -1.37
CTDNEP1-204ENST00000570484 ITPKAP23677 461 aa6.48□□□□□ -1.37
CTDNEP1-204ENST00000570484 MAOBP27338 520 aa6.48□□□□□ -1.37
CTDNEP1-204ENST00000570484 HOXD12P35452 270 aa6.48□□□□□ -1.37
CTDNEP1-204ENST00000570484 TRIM23P36406 574 aa6.48□□□□□ -1.37
CTDNEP1-204ENST00000570484 SKIV2L2P42285 1042 aaKnown RBP6.48□□□□□ -1.37
CTDNEP1-204ENST00000570484 CTSCP53634 463 aa6.48□□□□□ -1.37
CTDNEP1-204ENST00000570484 SRP54P61011 504 aaKnown RBP6.48□□□□□ -1.37
CTDNEP1-204ENST00000570484 FOXK2Q01167 660 aa6.48□□□□□ -1.37
CTDNEP1-204ENST00000570484 PPARDQ03181 441 aa6.48□□□□□ -1.37
CTDNEP1-204ENST00000570484 ILF3Q12906 894 aaKnown RBP eCLIP6.48□□□□□ -1.37
CTDNEP1-204ENST00000570484 LRP8Q14114 963 aa6.48□□□□□ -1.37
CTDNEP1-204ENST00000570484 SWI5Q1ZZU3 235 aa6.48□□□□□ -1.37
CTDNEP1-204ENST00000570484 TSNAXIP1Q2TAA8 658 aa6.48□□□□□ -1.37
CTDNEP1-204ENST00000570484 PLK5Q496M5 336 aa6.48□□□□□ -1.37
CTDNEP1-204ENST00000570484 ZNF789Q5FWF6 425 aa6.48□□□□□ -1.37
CTDNEP1-204ENST00000570484 ZNF648Q5T619 568 aaPredicted RBP6.48□□□□□ -1.37
CTDNEP1-204ENST00000570484 TMEM164Q5U3C3 297 aa6.48□□□□□ -1.37
CTDNEP1-204ENST00000570484 AGBL2Q5U5Z8 902 aa6.48□□□□□ -1.37
CTDNEP1-204ENST00000570484 TMEM220Q6QAJ8 160 aa6.48□□□□□ -1.37
CTDNEP1-204ENST00000570484 KDM7AQ6ZMT4 941 aa6.48□□□□□ -1.37
CTDNEP1-204ENST00000570484 FRA10AC1Q70Z53 315 aa6.48□□□□□ -1.37
CTDNEP1-204ENST00000570484 RD3Q7Z3Z2 195 aa6.48□□□□□ -1.37
CTDNEP1-204ENST00000570484 CMC1Q7Z7K0 106 aa6.48□□□□□ -1.37
CTDNEP1-204ENST00000570484 ADGRG6Q86SQ4 1221 aa6.48□□□□□ -1.37
CTDNEP1-204ENST00000570484 PIM3Q86V86 326 aa6.48□□□□□ -1.37
CTDNEP1-204ENST00000570484 IQCHQ86VS3 1027 aa6.48□□□□□ -1.37
CTDNEP1-204ENST00000570484 HID1Q8IV36 788 aa6.48□□□□□ -1.37
CTDNEP1-204ENST00000570484 IQCKQ8N0W5 287 aa6.48□□□□□ -1.37
CTDNEP1-204ENST00000570484 KRT222Q8N1A0 295 aa6.48□□□□□ -1.37
CTDNEP1-204ENST00000570484 C4orf33Q8N1A6 199 aa6.48□□□□□ -1.37
CTDNEP1-204ENST00000570484 MYO1HQ8N1T3 1032 aa6.48□□□□□ -1.37
CTDNEP1-204ENST00000570484 PELI3Q8N2H9 469 aa6.48□□□□□ -1.37
CTDNEP1-204ENST00000570484 RASGEF1AQ8N9B8 481 aa6.48□□□□□ -1.37
CTDNEP1-204ENST00000570484 MFSD2AQ8NA29 543 aa6.48□□□□□ -1.37
CTDNEP1-204ENST00000570484 SIDT2Q8NBJ9 832 aaKnown RBP6.48□□□□□ -1.37
CTDNEP1-204ENST00000570484 HM13Q8TCT9 377 aa6.48□□□□□ -1.37
CTDNEP1-204ENST00000570484 ACMSDQ8TDX5 336 aa6.48□□□□□ -1.37
CTDNEP1-204ENST00000570484 ASZ1Q8WWH4 475 aa6.48□□□□□ -1.37
CTDNEP1-204ENST00000570484 PIGKQ92643 395 aa6.48□□□□□ -1.37
CTDNEP1-204ENST00000570484 SGF29Q96ES7 293 aa6.48□□□□□ -1.37
CTDNEP1-204ENST00000570484 PDXPQ96GD0 296 aa6.48□□□□□ -1.37
CTDNEP1-204ENST00000570484 ATP6V1G3Q96LB4 118 aa6.48□□□□□ -1.37
CTDNEP1-204ENST00000570484 GPR21Q99679 349 aa6.48□□□□□ -1.37
CTDNEP1-204ENST00000570484 SELENOSQ9BQE4 189 aa6.48□□□□□ -1.37
CTDNEP1-204ENST00000570484 CCM2Q9BSQ5 444 aa6.48□□□□□ -1.37
CTDNEP1-204ENST00000570484 LGR4Q9BXB1 951 aa6.48□□□□□ -1.37
CTDNEP1-204ENST00000570484 SLC13A1Q9BZW2 595 aa6.48□□□□□ -1.37
CTDNEP1-204ENST00000570484 GRIP2Q9C0E4 1043 aa6.48□□□□□ -1.37
CTDNEP1-204ENST00000570484 P2RY12Q9H244 342 aa6.48□□□□□ -1.37
CTDNEP1-204ENST00000570484 CAB39LQ9H9S4 337 aa6.48□□□□□ -1.37
CTDNEP1-204ENST00000570484 SYTL2Q9HCH5 934 aa6.48□□□□□ -1.37
CTDNEP1-204ENST00000570484 CYP4F12Q9HCS2 524 aa6.48□□□□□ -1.37
CTDNEP1-204ENST00000570484 FGF22Q9HCT0 170 aa6.48□□□□□ -1.37
CTDNEP1-204ENST00000570484 TM9SF3Q9HD45 589 aa6.48□□□□□ -1.37
CTDNEP1-204ENST00000570484 LATS2Q9NRM7 1088 aa6.48□□□□□ -1.37
CTDNEP1-204ENST00000570484 ZNF446Q9NWS9 450 aa6.48□□□□□ -1.37
CTDNEP1-204ENST00000570484 DNAJC28Q9NX36 388 aa6.48□□□□□ -1.37
CTDNEP1-204ENST00000570484 APOBEC3BQ9UH17 382 aaKnown RBP6.48□□□□□ -1.37
CTDNEP1-204ENST00000570484 SUFUQ9UMX1 484 aa6.48□□□□□ -1.37
CTDNEP1-204ENST00000570484 GPR34Q9UPC5 381 aa6.48□□□□□ -1.37
CTDNEP1-204ENST00000570484 ANKRD6Q9Y2G4 727 aa6.48□□□□□ -1.37
CTDNEP1-204ENST00000570484 DNAJC16Q9Y2G8 782 aa6.48□□□□□ -1.37
CTDNEP1-204ENST00000570484 MTO1Q9Y2Z2 717 aaKnown RBP6.48□□□□□ -1.37
CTDNEP1-204ENST00000570484 VWA7Q9Y334 891 aa6.48□□□□□ -1.37
CTDNEP1-204ENST00000570484 NFS1Q9Y697 457 aa6.48□□□□□ -1.37
CTDNEP1-204ENST00000570484 OAS3Q9Y6K5 1087 aaKnown RBP6.48□□□□□ -1.37
CTDNEP1-204ENST00000570484 NUP205Q92621 2012 aa6.48□□□□□ -1.37
CTDNEP1-204ENST00000570484 A0A096LPK6 155 aa6.47□□□□□ -1.37
CTDNEP1-204ENST00000570484 SPTY2D1-AS1A0A0U1RR47 76 aa6.47□□□□□ -1.37
CTDNEP1-204ENST00000570484 TMEM202A6NGA9 273 aa6.47□□□□□ -1.37
CTDNEP1-204ENST00000570484 IQCF5A8MTL0 148 aa6.47□□□□□ -1.37
CTDNEP1-204ENST00000570484 PDZK1P1A8MUH7 402 aa6.47□□□□□ -1.37
CTDNEP1-204ENST00000570484 GOLGA8RI6L899 631 aa6.47□□□□□ -1.37
CTDNEP1-204ENST00000570484 TLR4O00206 839 aa6.47□□□□□ -1.37
CTDNEP1-204ENST00000570484 IFRD1O00458 451 aaPredicted RBP6.47□□□□□ -1.37
CTDNEP1-204ENST00000570484 LIN7AO14910 233 aaPredicted RBP6.47□□□□□ -1.37
CTDNEP1-204ENST00000570484 SASH3O75995 380 aa6.47□□□□□ -1.37
CTDNEP1-204ENST00000570484 TNFP01375 233 aa6.47□□□□□ -1.37
CTDNEP1-204ENST00000570484 ALDOAP04075 364 aaKnown RBP6.47□□□□□ -1.37
CTDNEP1-204ENST00000570484 S100BP04271 92 aaPredicted RBP6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms