RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 WACQ9BTA9 647 aa6.58□□□□□ -1.36
SMG1-217ENST00000569764 ROGDIQ9GZN7 287 aa6.58□□□□□ -1.36
SMG1-217ENST00000569764 MAGEE1Q9HCI5 957 aa6.58□□□□□ -1.36
SMG1-217ENST00000569764 THAP1Q9NVV9 213 aa6.58□□□□□ -1.36
SMG1-217ENST00000569764 MARCH2Q9P0N8 246 aa6.58□□□□□ -1.36
SMG1-217ENST00000569764 KCNK7Q9Y2U2 307 aa6.58□□□□□ -1.36
SMG1-217ENST00000569764 STARD13Q9Y3M8 1113 aa6.58□□□□□ -1.36
SMG1-217ENST00000569764 PCDHA13Q9Y5I0 950 aa6.58□□□□□ -1.36
SMG1-217ENST00000569764 IGKV6D-21A0A0A0MT36 114 aa6.58□□□□□ -1.36
SMG1-217ENST00000569764 LOC100653049A0A140TA62 436 aa6.58□□□□□ -1.36
SMG1-217ENST00000569764 E9PAM4 449 aa6.58□□□□□ -1.36
SMG1-217ENST00000569764 PLD2O14939 933 aa6.58□□□□□ -1.36
SMG1-217ENST00000569764 ANGPT2O15123 496 aa6.58□□□□□ -1.36
SMG1-217ENST00000569764 CPNE3O75131 537 aaKnown RBP6.58□□□□□ -1.36
SMG1-217ENST00000569764 KRT34O76011 436 aa6.58□□□□□ -1.36
SMG1-217ENST00000569764 SPATA31D3P0C874 917 aa6.58□□□□□ -1.36
SMG1-217ENST00000569764 ERVK-10P10266 1014 aa6.58□□□□□ -1.36
SMG1-217ENST00000569764 CPT2P23786 658 aa6.58□□□□□ -1.36
SMG1-217ENST00000569764 HLA-FP30511 346 aa6.58□□□□□ -1.36
SMG1-217ENST00000569764 SLC7A1P30825 629 aa6.58□□□□□ -1.36
SMG1-217ENST00000569764 SDC4P31431 198 aa6.58□□□□□ -1.36
SMG1-217ENST00000569764 ALDH9A1P49189 494 aa6.58□□□□□ -1.36
SMG1-217ENST00000569764 RPL6Q02878 288 aaKnown RBP6.58□□□□□ -1.36
SMG1-217ENST00000569764 FLOT2Q14254 428 aa6.58□□□□□ -1.36
SMG1-217ENST00000569764 C2orf76Q3KRA6 126 aa6.58□□□□□ -1.36
SMG1-217ENST00000569764 INTS6LQ5JSJ4 861 aaKnown RBP6.58□□□□□ -1.36
SMG1-217ENST00000569764 WLSQ5T9L3 541 aa6.58□□□□□ -1.36
SMG1-217ENST00000569764 AFMIDQ63HM1 303 aa6.58□□□□□ -1.36
SMG1-217ENST00000569764 ACAD10Q6JQN1 1059 aa6.58□□□□□ -1.36
SMG1-217ENST00000569764 SPATA31D4Q6ZUB0 917 aa6.58□□□□□ -1.36
SMG1-217ENST00000569764 ERICH1Q86X53 443 aa6.58□□□□□ -1.36
SMG1-217ENST00000569764 EID3Q8N140 333 aa6.58□□□□□ -1.36
SMG1-217ENST00000569764 TMEM161BQ8NDZ6 487 aa6.58□□□□□ -1.36
SMG1-217ENST00000569764 KCTD4Q8WVF5 259 aa6.58□□□□□ -1.36
SMG1-217ENST00000569764 RNF125Q96EQ8 232 aa6.58□□□□□ -1.36
SMG1-217ENST00000569764 FOPNLQ96NB1 174 aa6.58□□□□□ -1.36
SMG1-217ENST00000569764 ELOVL2Q9NXB9 296 aa6.58□□□□□ -1.36
SMG1-217ENST00000569764 IL20RAQ9UHF4 553 aa6.58□□□□□ -1.36
SMG1-217ENST00000569764 TRAF6Q9Y4K3 522 aa6.58□□□□□ -1.36
SMG1-217ENST00000569764 SPACA6W5XKT8 324 aa6.58□□□□□ -1.36
SMG1-217ENST00000569764 SASH3O75995 380 aa6.58□□□□□ -1.36
SMG1-217ENST00000569764 ASS1P00966 412 aaKnown RBP6.58□□□□□ -1.36
SMG1-217ENST00000569764 TMIGD3P0DMS9 266 aaPredicted RBP6.58□□□□□ -1.36
SMG1-217ENST00000569764 CXCL8P10145 99 aa6.58□□□□□ -1.36
SMG1-217ENST00000569764 PTPN1P18031 435 aaKnown RBP6.58□□□□□ -1.36
SMG1-217ENST00000569764 SLC5A2P31639 672 aa6.58□□□□□ -1.36
SMG1-217ENST00000569764 CXCR5P32302 372 aa6.58□□□□□ -1.36
SMG1-217ENST00000569764 ARL3P36405 182 aa6.58□□□□□ -1.36
SMG1-217ENST00000569764 WNT5AP41221 380 aa6.58□□□□□ -1.36
SMG1-217ENST00000569764 CDC34P49427 236 aaPredicted RBP6.58□□□□□ -1.36
SMG1-217ENST00000569764 ACOT2P49753 483 aa6.58□□□□□ -1.36
SMG1-217ENST00000569764 KCNQ1P51787 676 aa6.58□□□□□ -1.36
SMG1-217ENST00000569764 PMP22Q01453 160 aa6.58□□□□□ -1.36
SMG1-217ENST00000569764 GSTM4Q03013 218 aa6.58□□□□□ -1.36
SMG1-217ENST00000569764 ARHGAP19Q14CB8 494 aa6.58□□□□□ -1.36
SMG1-217ENST00000569764 CYTH1Q15438 398 aa6.58□□□□□ -1.36
SMG1-217ENST00000569764 SNRNP35Q16560 246 aaKnown RBP6.58□□□□□ -1.36
SMG1-217ENST00000569764 TAZQ16635 292 aa6.58□□□□□ -1.36
SMG1-217ENST00000569764 TUSC1Q2TAM9 212 aa6.58□□□□□ -1.36
SMG1-217ENST00000569764 ERN2Q76MJ5 926 aaKnown RBP6.58□□□□□ -1.36
SMG1-217ENST00000569764 FRMD5Q7Z6J6 570 aa6.58□□□□□ -1.36
SMG1-217ENST00000569764 CBWD2Q8IUF1 395 aa6.58□□□□□ -1.36
SMG1-217ENST00000569764 ARHGEF19Q8IW93 802 aa6.58□□□□□ -1.36
SMG1-217ENST00000569764 MAML2Q8IZL2 1156 aaPredicted RBP6.58□□□□□ -1.36
SMG1-217ENST00000569764 DPP10Q8N608 796 aa6.58□□□□□ -1.36
SMG1-217ENST00000569764 CLRN3Q8NCR9 226 aa6.58□□□□□ -1.36
SMG1-217ENST00000569764 PPP1R13LQ8WUF5 828 aa6.58□□□□□ -1.36
SMG1-217ENST00000569764 HMGB4Q8WW32 186 aa6.58□□□□□ -1.36
SMG1-217ENST00000569764 SEMA4DQ92854 862 aa6.58□□□□□ -1.36
SMG1-217ENST00000569764 NAT6Q93015 286 aa6.58□□□□□ -1.36
SMG1-217ENST00000569764 NXPE2Q96DL1 559 aa6.58□□□□□ -1.36
SMG1-217ENST00000569764 RRNAD1Q96FB5 475 aaKnown RBP6.58□□□□□ -1.36
SMG1-217ENST00000569764 OR1F2PQ96R84 312 aa6.58□□□□□ -1.36
SMG1-217ENST00000569764 USB1Q9BQ65 265 aaKnown RBP6.58□□□□□ -1.36
SMG1-217ENST00000569764 LRRC1Q9BTT6 524 aa6.58□□□□□ -1.36
SMG1-217ENST00000569764 MFFQ9GZY8 342 aa6.58□□□□□ -1.36
SMG1-217ENST00000569764 TOR4AQ9NXH8 423 aa6.58□□□□□ -1.36
SMG1-217ENST00000569764 GDAP2Q9NXN4 497 aa6.58□□□□□ -1.36
SMG1-217ENST00000569764 TAS2R14Q9NYV8 317 aa6.58□□□□□ -1.36
SMG1-217ENST00000569764 UBA2Q9UBT2 640 aaPredicted RBP6.58□□□□□ -1.36
SMG1-217ENST00000569764 NENFQ9UMX5 172 aa6.58□□□□□ -1.36
SMG1-217ENST00000569764 PTPRJQ12913 1337 aa6.58□□□□□ -1.36
SMG1-217ENST00000569764 C5orf51A6NDU8 294 aa6.58□□□□□ -1.36
SMG1-217ENST00000569764 SYCE1LA8MT33 242 aa6.58□□□□□ -1.36
SMG1-217ENST00000569764 H0Y858 1186 aa6.58□□□□□ -1.36
SMG1-217ENST00000569764 TGM5O43548 720 aa6.58□□□□□ -1.36
SMG1-217ENST00000569764 NOBOXO60393 691 aa6.58□□□□□ -1.36
SMG1-217ENST00000569764 SERPINA3P01011 423 aa6.58□□□□□ -1.36
SMG1-217ENST00000569764 CELA3AP09093 270 aa6.58□□□□□ -1.36
SMG1-217ENST00000569764 PRKCAP17252 672 aa6.58□□□□□ -1.36
SMG1-217ENST00000569764 PHC1P78364 1004 aa6.58□□□□□ -1.36
SMG1-217ENST00000569764 MBTD1Q05BQ5 628 aa6.58□□□□□ -1.36
SMG1-217ENST00000569764 TGM3Q08188 693 aa6.58□□□□□ -1.36
SMG1-217ENST00000569764 IL24Q13007 206 aa6.58□□□□□ -1.36
SMG1-217ENST00000569764 CAMK2GQ13555 558 aaPredicted RBP6.58□□□□□ -1.36
SMG1-217ENST00000569764 KRT81Q14533 505 aa6.58□□□□□ -1.36
SMG1-217ENST00000569764 ZNF268Q14587 947 aaPredicted RBP6.58□□□□□ -1.36
SMG1-217ENST00000569764 CNN3Q15417 329 aaKnown RBP6.58□□□□□ -1.36
SMG1-217ENST00000569764 PAGE2BQ5JRK9 111 aa6.58□□□□□ -1.36
SMG1-217ENST00000569764 ETFRF1Q6IPR1 90 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms