RNA–Protein interactions for RNA: ENST00000569476.2

LINC00559-201, long intergenic non-protein coding RNA 559, humanhuman

TSL 1 (best) BASIC

Gene LINC00559, Length 3,867 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00559-201ENST00000569476 C6orf136Q5SQH8 315 aa7.76□□□□□ -1.17
LINC00559-201ENST00000569476 LPCAT4Q643R3 524 aa7.76□□□□□ -1.17
LINC00559-201ENST00000569476 TAS2R42Q7RTR8 314 aa7.76□□□□□ -1.17
LINC00559-201ENST00000569476 GOLGA7Q7Z5G4 137 aa7.76□□□□□ -1.17
LINC00559-201ENST00000569476 PGBD3Q8N328 593 aa7.76□□□□□ -1.17
LINC00559-201ENST00000569476 SIDT2Q8NBJ9 832 aaKnown RBP7.76□□□□□ -1.17
LINC00559-201ENST00000569476 USP7Q93009 1102 aa7.76□□□□□ -1.17
LINC00559-201ENST00000569476 SCRN2Q96FV2 425 aa7.76□□□□□ -1.17
LINC00559-201ENST00000569476 SPATA16Q9BXB7 569 aa7.76□□□□□ -1.17
LINC00559-201ENST00000569476 RNF38Q9H0F5 515 aa7.76□□□□□ -1.17
LINC00559-201ENST00000569476 GORASP2Q9H8Y8 452 aa7.76□□□□□ -1.17
LINC00559-201ENST00000569476 CCDC167Q9P0B6 97 aa7.76□□□□□ -1.17
LINC00559-201ENST00000569476 DMTF1Q9Y222 760 aa7.76□□□□□ -1.17
LINC00559-201ENST00000569476 TCRBV5S2A0A599 114 aa7.76□□□□□ -1.17
LINC00559-201ENST00000569476 DHRS12A0PJE2 317 aa7.76□□□□□ -1.17
LINC00559-201ENST00000569476 PRORSD1PA6NEY8 169 aa7.76□□□□□ -1.17
LINC00559-201ENST00000569476 K7EPI3 171 aa7.76□□□□□ -1.17
LINC00559-201ENST00000569476 PDLIM1O00151 329 aa7.76□□□□□ -1.17
LINC00559-201ENST00000569476 FXYD1O00168 92 aa7.76□□□□□ -1.17
LINC00559-201ENST00000569476 SLC9A3R1O14745 358 aaPredicted RBP7.76□□□□□ -1.17
LINC00559-201ENST00000569476 FFAR2O15552 330 aa7.76□□□□□ -1.17
LINC00559-201ENST00000569476 SNAP91O60641 907 aa7.76□□□□□ -1.17
LINC00559-201ENST00000569476 SCELO95171 688 aa7.76□□□□□ -1.17
LINC00559-201ENST00000569476 RASAL1O95294 804 aa7.76□□□□□ -1.17
LINC00559-201ENST00000569476 LRG1P02750 347 aa7.76□□□□□ -1.17
LINC00559-201ENST00000569476 ADH1AP07327 375 aa7.76□□□□□ -1.17
LINC00559-201ENST00000569476 HNRNPA1P09651 372 aaKnown RBP eCLIP7.76□□□□□ -1.17
LINC00559-201ENST00000569476 CHRM3P20309 590 aa7.76□□□□□ -1.17
LINC00559-201ENST00000569476 SLC6A2P23975 617 aa7.76□□□□□ -1.17
LINC00559-201ENST00000569476 SGSHP51688 502 aa7.76□□□□□ -1.17
LINC00559-201ENST00000569476 TRAF3Q13114 568 aa7.76□□□□□ -1.17
LINC00559-201ENST00000569476 SMAD1Q15797 465 aaKnown RBP7.76□□□□□ -1.17
LINC00559-201ENST00000569476 MYLK3Q32MK0 819 aa7.76□□□□□ -1.17
LINC00559-201ENST00000569476 PLEKHG6Q3KR16 790 aa7.76□□□□□ -1.17
LINC00559-201ENST00000569476 CACHD1Q5VU97 1274 aa7.76□□□□□ -1.17
LINC00559-201ENST00000569476 CLEC6AQ6EIG7 209 aa7.76□□□□□ -1.17
LINC00559-201ENST00000569476 ELMSAN1Q6PJG2 1045 aa7.76□□□□□ -1.17
LINC00559-201ENST00000569476 TMEM173Q86WV6 379 aaPredicted RBP7.76□□□□□ -1.17
LINC00559-201ENST00000569476 FBXO15Q8NCQ5 510 aaPredicted RBP7.76□□□□□ -1.17
LINC00559-201ENST00000569476 DIS3LQ8TF46 1054 aaKnown RBP7.76□□□□□ -1.17
LINC00559-201ENST00000569476 DGCR14Q96DF8 476 aaKnown RBP7.76□□□□□ -1.17
LINC00559-201ENST00000569476 C3orf30Q96M34 536 aa7.76□□□□□ -1.17
LINC00559-201ENST00000569476 NSMCE3Q96MG7 304 aa7.76□□□□□ -1.17
LINC00559-201ENST00000569476 EPHX3Q9H6B9 360 aa7.76□□□□□ -1.17
LINC00559-201ENST00000569476 PTTG2Q9NZH5 202 aa7.76□□□□□ -1.17
LINC00559-201ENST00000569476 SLC8A2Q9UPR5 921 aa7.76□□□□□ -1.17
LINC00559-201ENST00000569476 PLXNA2O75051 1894 aa7.75□□□□□ -1.17
LINC00559-201ENST00000569476 CDC7O00311 574 aa7.75□□□□□ -1.17
LINC00559-201ENST00000569476 RNASEH2AO75792 299 aaKnown RBP7.75□□□□□ -1.17
LINC00559-201ENST00000569476 KRT6AP02538 564 aa7.75□□□□□ -1.17
LINC00559-201ENST00000569476 KRT6BP04259 564 aa7.75□□□□□ -1.17
LINC00559-201ENST00000569476 SRPRAP08240 638 aaKnown RBP7.75□□□□□ -1.17
LINC00559-201ENST00000569476 HDCP19113 662 aa7.75□□□□□ -1.17
LINC00559-201ENST00000569476 CAPN3P20807 821 aa7.75□□□□□ -1.17
LINC00559-201ENST00000569476 MYF6P23409 242 aa7.75□□□□□ -1.17
LINC00559-201ENST00000569476 GRIA2P42262 883 aa7.75□□□□□ -1.17
LINC00559-201ENST00000569476 KRT6CP48668 564 aa7.75□□□□□ -1.17
LINC00559-201ENST00000569476 NME5P56597 212 aa7.75□□□□□ -1.17
LINC00559-201ENST00000569476 NFYCQ13952 458 aa7.75□□□□□ -1.17
LINC00559-201ENST00000569476 GEN1Q17RS7 908 aa7.75□□□□□ -1.17
LINC00559-201ENST00000569476 CARD16Q5EG05 197 aa7.75□□□□□ -1.17
LINC00559-201ENST00000569476 ATG9BQ674R7 924 aa7.75□□□□□ -1.17
LINC00559-201ENST00000569476 PIANPQ8IYJ0 282 aa7.75□□□□□ -1.17
LINC00559-201ENST00000569476 COPS7BQ9H9Q2 264 aaPredicted RBP7.75□□□□□ -1.17
LINC00559-201ENST00000569476 DPP7Q9UHL4 492 aa7.75□□□□□ -1.17
LINC00559-201ENST00000569476 ANAPC2Q9UJX6 822 aa7.75□□□□□ -1.17
LINC00559-201ENST00000569476 CPQQ9Y646 472 aa7.75□□□□□ -1.17
LINC00559-201ENST00000569476 FAM220BPB1ANY3 271 aa7.75□□□□□ -1.17
LINC00559-201ENST00000569476 CFAP99D6REC4 459 aa7.75□□□□□ -1.17
LINC00559-201ENST00000569476 NME4O00746 187 aa7.75□□□□□ -1.17
LINC00559-201ENST00000569476 PRSS23O95084 383 aa7.75□□□□□ -1.17
LINC00559-201ENST00000569476 RB1P06400 928 aa7.75□□□□□ -1.17
LINC00559-201ENST00000569476 CLTBP09497 229 aa7.75□□□□□ -1.17
LINC00559-201ENST00000569476 SMIM18P0DKX4 95 aa7.75□□□□□ -1.17
LINC00559-201ENST00000569476 HMOX2P30519 316 aa7.75□□□□□ -1.17
LINC00559-201ENST00000569476 HK3P52790 923 aa7.75□□□□□ -1.17
LINC00559-201ENST00000569476 HTRA4P83105 476 aaPredicted RBP7.75□□□□□ -1.17
LINC00559-201ENST00000569476 GK3PQ14409 553 aa7.75□□□□□ -1.17
LINC00559-201ENST00000569476 C22orf39Q6P5X5 142 aa7.75□□□□□ -1.17
LINC00559-201ENST00000569476 ZNF765Q7L2R6 523 aa7.75□□□□□ -1.17
LINC00559-201ENST00000569476 LDB1Q86U70 411 aaPredicted RBP7.75□□□□□ -1.17
LINC00559-201ENST00000569476 LILRA2Q8N149 483 aa7.75□□□□□ -1.17
LINC00559-201ENST00000569476 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.75□□□□□ -1.17
LINC00559-201ENST00000569476 L3MBTL4Q8NA19 623 aa7.75□□□□□ -1.17
LINC00559-201ENST00000569476 EEF1AKMT1Q8WVE0 214 aa7.75□□□□□ -1.17
LINC00559-201ENST00000569476 ATL1Q8WXF7 558 aa7.75□□□□□ -1.17
LINC00559-201ENST00000569476 EME1Q96AY2 570 aa7.75□□□□□ -1.17
LINC00559-201ENST00000569476 SLCO4A1Q96BD0 722 aa7.75□□□□□ -1.17
LINC00559-201ENST00000569476 B3GALT6Q96L58 329 aa7.75□□□□□ -1.17
LINC00559-201ENST00000569476 VPS35Q96QK1 796 aa7.75□□□□□ -1.17
LINC00559-201ENST00000569476 KCTD14Q9BQ13 255 aaPredicted RBP7.75□□□□□ -1.17
LINC00559-201ENST00000569476 SLC12A9Q9BXP2 914 aa7.75□□□□□ -1.17
LINC00559-201ENST00000569476 SHCBP1LQ9BZQ2 653 aa7.75□□□□□ -1.17
LINC00559-201ENST00000569476 CMTM6Q9NX76 183 aa7.75□□□□□ -1.17
LINC00559-201ENST00000569476 OPTCQ9UBM4 332 aa7.75□□□□□ -1.17
LINC00559-201ENST00000569476 CRLS1Q9UJA2 301 aa7.75□□□□□ -1.17
LINC00559-201ENST00000569476 C2orf78A6NCI8 922 aa7.75□□□□□ -1.17
LINC00559-201ENST00000569476 LSM1O15116 133 aaKnown RBP7.75□□□□□ -1.17
LINC00559-201ENST00000569476 NIPSNAP2O75323 286 aa7.75□□□□□ -1.17
LINC00559-201ENST00000569476 PRAMEF1O95521 474 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms