RNA–Protein interactions for RNA: ENST00000568949.1

SNX29-207, Transcript of sorting nexin 29, humanhuman

TSL 3

Gene SNX29, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-207ENST00000568949 MYO1AQ9UBC5 1043 aa12.17□□□□□ -0.46
SNX29-207ENST00000568949 SHOC2Q9UQ13 582 aa12.17□□□□□ -0.46
SNX29-207ENST00000568949 CNTRLQ7Z7A1 2325 aa12.17□□□□□ -0.46
SNX29-207ENST00000568949 APCP25054 2843 aa12.16□□□□□ -0.46
SNX29-207ENST00000568949 IPO13O94829 963 aaKnown RBP12.16□□□□□ -0.46
SNX29-207ENST00000568949 IGHEP01854 428 aa12.16□□□□□ -0.46
SNX29-207ENST00000568949 BPIP17213 487 aa12.16□□□□□ -0.46
SNX29-207ENST00000568949 MX2P20592 715 aa12.16□□□□□ -0.46
SNX29-207ENST00000568949 HADHAP40939 763 aa12.16□□□□□ -0.46
SNX29-207ENST00000568949 ARSEP51690 589 aa12.16□□□□□ -0.46
SNX29-207ENST00000568949 RAPSNQ13702 412 aa12.16□□□□□ -0.46
SNX29-207ENST00000568949 GALNT3Q14435 633 aa12.16□□□□□ -0.46
SNX29-207ENST00000568949 MYBPC3Q14896 1274 aa12.16□□□□□ -0.46
SNX29-207ENST00000568949 NCF4Q15080 339 aa12.16□□□□□ -0.46
SNX29-207ENST00000568949 PRAMEF17Q5VTA0 474 aa12.16□□□□□ -0.46
SNX29-207ENST00000568949 ARMC6Q6NXE6 501 aa12.16□□□□□ -0.46
SNX29-207ENST00000568949 ZNF571Q7Z3V5 609 aaPredicted RBP12.16□□□□□ -0.46
SNX29-207ENST00000568949 AMZ2Q86W34 360 aa12.16□□□□□ -0.46
SNX29-207ENST00000568949 SYTL1Q8IYJ3 562 aa12.16□□□□□ -0.46
SNX29-207ENST00000568949 TM9SF4Q92544 642 aa12.16□□□□□ -0.46
SNX29-207ENST00000568949 FER1L6-AS2Q96M78 137 aa12.16□□□□□ -0.46
SNX29-207ENST00000568949 TRIB3Q96RU7 358 aa12.16□□□□□ -0.46
SNX29-207ENST00000568949 SRPK1Q96SB4 655 aaKnown RBP12.16□□□□□ -0.46
SNX29-207ENST00000568949 DPH2Q9BQC3 489 aaPredicted RBP12.16□□□□□ -0.46
SNX29-207ENST00000568949 DHRS4Q9BTZ2 278 aa12.16□□□□□ -0.46
SNX29-207ENST00000568949 GPR63Q9BZJ6 419 aa12.16□□□□□ -0.46
SNX29-207ENST00000568949 HAUS4Q9H6D7 363 aa12.16□□□□□ -0.46
SNX29-207ENST00000568949 RUBCNLQ9H714 662 aa12.16□□□□□ -0.46
SNX29-207ENST00000568949 AGPAT4Q9NRZ5 378 aa12.16□□□□□ -0.46
SNX29-207ENST00000568949 SOHLH2Q9NX45 425 aa12.16□□□□□ -0.46
SNX29-207ENST00000568949 TMPRSS11EQ9UL52 423 aa12.16□□□□□ -0.46
SNX29-207ENST00000568949 PADI2Q9Y2J8 665 aa12.16□□□□□ -0.46
SNX29-207ENST00000568949 ZNF711Q9Y462 761 aa12.16□□□□□ -0.46
SNX29-207ENST00000568949 PCDHGA10Q9Y5H3 936 aa12.16□□□□□ -0.46
SNX29-207ENST00000568949 DNMT3AQ9Y6K1 912 aaPredicted RBP12.16□□□□□ -0.46
SNX29-207ENST00000568949 SVILO95425 2214 aa12.16□□□□□ -0.46
SNX29-207ENST00000568949 CSMD1Q96PZ7 3565 aa12.16□□□□□ -0.46
SNX29-207ENST00000568949 OTOGQ6ZRI0 2925 aa12.16□□□□□ -0.46
SNX29-207ENST00000568949 PCSK5Q92824 1860 aa12.15□□□□□ -0.46
SNX29-207ENST00000568949 ARHGAP10A1A4S6 786 aa12.15□□□□□ -0.46
SNX29-207ENST00000568949 DDX3XO00571 662 aaKnown RBP eCLIP12.15□□□□□ -0.46
SNX29-207ENST00000568949 CD48P09326 243 aa12.15□□□□□ -0.46
SNX29-207ENST00000568949 MSL3P1P0C860 447 aa12.15□□□□□ -0.46
SNX29-207ENST00000568949 MTHFD1P11586 935 aaKnown RBP12.15□□□□□ -0.46
SNX29-207ENST00000568949 GRNP28799 593 aaKnown RBP12.15□□□□□ -0.46
SNX29-207ENST00000568949 ADCY2Q08462 1091 aa12.15□□□□□ -0.46
SNX29-207ENST00000568949 ABRQ12979 859 aa12.15□□□□□ -0.46
SNX29-207ENST00000568949 DPYSL3Q14195 570 aa12.15□□□□□ -0.46
SNX29-207ENST00000568949 ZRSR2Q15696 482 aaKnown RBP12.15□□□□□ -0.46
SNX29-207ENST00000568949 KYNUQ16719 465 aa12.15□□□□□ -0.46
SNX29-207ENST00000568949 FAM69BQ5VUD6 431 aa12.15□□□□□ -0.46
SNX29-207ENST00000568949 SP5Q6BEB4 398 aaPredicted RBP12.15□□□□□ -0.46
SNX29-207ENST00000568949 CLEC17AQ6ZS10 378 aa12.15□□□□□ -0.46
SNX29-207ENST00000568949 Q6ZS92 163 aa12.15□□□□□ -0.46
SNX29-207ENST00000568949 MRGPREQ86SM8 312 aa12.15□□□□□ -0.46
SNX29-207ENST00000568949 ZADH2Q8N4Q0 377 aa12.15□□□□□ -0.46
SNX29-207ENST00000568949 INPP5DQ92835 1189 aa12.15□□□□□ -0.46
SNX29-207ENST00000568949 HDAC11Q96DB2 347 aa12.15□□□□□ -0.46
SNX29-207ENST00000568949 TTC25Q96NG3 672 aa12.15□□□□□ -0.46
SNX29-207ENST00000568949 UNKQ9C0B0 810 aaKnown RBP12.15□□□□□ -0.46
SNX29-207ENST00000568949 ACTR5Q9H9F9 607 aaPredicted RBP12.15□□□□□ -0.46
SNX29-207ENST00000568949 IP6K2Q9UHH9 426 aa12.15□□□□□ -0.46
SNX29-207ENST00000568949 NTNG1Q9Y2I2 539 aa12.15□□□□□ -0.46
SNX29-207ENST00000568949 ANKRD12Q6UB98 2062 aa12.14□□□□□ -0.47
SNX29-207ENST00000568949 HEATR9A2RTY3 570 aa12.14□□□□□ -0.47
SNX29-207ENST00000568949 C9J4A7 227 aa12.14□□□□□ -0.47
SNX29-207ENST00000568949 F5H423 210 aaPredicted RBP12.14□□□□□ -0.47
SNX29-207ENST00000568949 POP7O75817 140 aaKnown RBP12.14□□□□□ -0.47
SNX29-207ENST00000568949 SLC4A1P02730 911 aa12.14□□□□□ -0.47
SNX29-207ENST00000568949 PIRTP0C851 137 aa12.14□□□□□ -0.47
SNX29-207ENST00000568949 CYP2A7P20853 494 aa12.14□□□□□ -0.47
SNX29-207ENST00000568949 ITGA3P26006 1051 aa12.14□□□□□ -0.47
SNX29-207ENST00000568949 PRKCIP41743 596 aa12.14□□□□□ -0.47
SNX29-207ENST00000568949 GLRBP48167 497 aa12.14□□□□□ -0.47
SNX29-207ENST00000568949 KPNA2P52292 529 aaKnown RBP12.14□□□□□ -0.47
SNX29-207ENST00000568949 XRCC4Q13426 336 aa12.14□□□□□ -0.47
SNX29-207ENST00000568949 SSPNQ14714 243 aa12.14□□□□□ -0.47
SNX29-207ENST00000568949 ASIC2Q16515 512 aa12.14□□□□□ -0.47
SNX29-207ENST00000568949 ATP13A5Q4VNC0 1218 aa12.14□□□□□ -0.47
SNX29-207ENST00000568949 ZNF789Q5FWF6 425 aa12.14□□□□□ -0.47
SNX29-207ENST00000568949 DCAF10Q5QP82 559 aa12.14□□□□□ -0.47
SNX29-207ENST00000568949 APTXQ7Z2E3 356 aaKnown RBP12.14□□□□□ -0.47
SNX29-207ENST00000568949 GALNT16Q8N428 558 aa12.14□□□□□ -0.47
SNX29-207ENST00000568949 TTC30BQ8N4P2 665 aa12.14□□□□□ -0.47
SNX29-207ENST00000568949 CNTD1Q8N815 330 aa12.14□□□□□ -0.47
SNX29-207ENST00000568949 CLEC1AQ8NC01 280 aa12.14□□□□□ -0.47
SNX29-207ENST00000568949 GDAP1Q8TB36 358 aa12.14□□□□□ -0.47
SNX29-207ENST00000568949 DTX3LQ8TDB6 740 aa12.14□□□□□ -0.47
SNX29-207ENST00000568949 C17orf62Q9BQA9 187 aa12.14□□□□□ -0.47
SNX29-207ENST00000568949 ZNF670Q9BS34 389 aa12.14□□□□□ -0.47
SNX29-207ENST00000568949 ZCCHC2Q9C0B9 1178 aaKnown RBP12.14□□□□□ -0.47
SNX29-207ENST00000568949 ISCUQ9H1K1 167 aa12.14□□□□□ -0.47
SNX29-207ENST00000568949 ZNF552Q9H707 407 aaPredicted RBP12.14□□□□□ -0.47
SNX29-207ENST00000568949 C1GALT1Q9NS00 363 aa12.14□□□□□ -0.47
SNX29-207ENST00000568949 IMP3Q9NV31 184 aaKnown RBP12.14□□□□□ -0.47
SNX29-207ENST00000568949 AIPL1Q9NZN9 384 aa12.14□□□□□ -0.47
SNX29-207ENST00000568949 SLC24A2Q9UI40 661 aa12.14□□□□□ -0.47
SNX29-207ENST00000568949 PSMD13Q9UNM6 376 aa12.14□□□□□ -0.47
SNX29-207ENST00000568949 CCDC88CQ9P219 2028 aa12.13□□□□□ -0.47
SNX29-207ENST00000568949 OR6C74A6NCV1 312 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms