RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 PSMD3O43242 534 aa4.69□□□□□ -1.66
CLK3-219ENST00000567805 LDB2O43679 373 aa4.69□□□□□ -1.66
CLK3-219ENST00000567805 KRT86O43790 486 aa4.69□□□□□ -1.66
CLK3-219ENST00000567805 AP2A1O95782 977 aa4.69□□□□□ -1.66
CLK3-219ENST00000567805 PRB1P04280 392 aa4.69□□□□□ -1.66
CLK3-219ENST00000567805 ITGB2P05107 769 aa4.69□□□□□ -1.66
CLK3-219ENST00000567805 ATP1B2P14415 290 aaPredicted RBP4.69□□□□□ -1.66
CLK3-219ENST00000567805 CD46P15529 392 aa4.69□□□□□ -1.66
CLK3-219ENST00000567805 TYRP1P17643 537 aa4.69□□□□□ -1.66
CLK3-219ENST00000567805 ITGALP20701 1170 aa4.69□□□□□ -1.66
CLK3-219ENST00000567805 PBLDP30039 288 aaPredicted RBP4.69□□□□□ -1.66
CLK3-219ENST00000567805 STIP1P31948 543 aaKnown RBP4.69□□□□□ -1.66
CLK3-219ENST00000567805 CA5AP35218 305 aa4.69□□□□□ -1.66
CLK3-219ENST00000567805 ZNF140P52738 457 aaPredicted RBP4.69□□□□□ -1.66
CLK3-219ENST00000567805 CTSCP53634 463 aa4.69□□□□□ -1.66
CLK3-219ENST00000567805 DRG2P55039 364 aaKnown RBP4.69□□□□□ -1.66
CLK3-219ENST00000567805 GFERP55789 205 aa4.69□□□□□ -1.66
CLK3-219ENST00000567805 GSDMDP57764 484 aa4.69□□□□□ -1.66
CLK3-219ENST00000567805 XIAPP98170 497 aa4.69□□□□□ -1.66
CLK3-219ENST00000567805 SRSF6Q13247 344 aaKnown RBP4.69□□□□□ -1.66
CLK3-219ENST00000567805 MSLNQ13421 630 aaPredicted RBP4.69□□□□□ -1.66
CLK3-219ENST00000567805 OLIG2Q13516 323 aa4.69□□□□□ -1.66
CLK3-219ENST00000567805 GPR18Q14330 331 aa4.69□□□□□ -1.66
CLK3-219ENST00000567805 NFE2L1Q14494 772 aa4.69□□□□□ -1.66
CLK3-219ENST00000567805 PTPRCAPQ14761 206 aa4.69□□□□□ -1.66
CLK3-219ENST00000567805 CLCA4Q14CN2 919 aa4.69□□□□□ -1.66
CLK3-219ENST00000567805 RPE65Q16518 533 aa4.69□□□□□ -1.66
CLK3-219ENST00000567805 GPR33Q49SQ1 333 aa4.69□□□□□ -1.66
CLK3-219ENST00000567805 BCL7AQ4VC05 210 aa4.69□□□□□ -1.66
CLK3-219ENST00000567805 FNBP1LQ5T0N5 605 aa4.69□□□□□ -1.66
CLK3-219ENST00000567805 SEL1L2Q5TEA6 688 aa4.69□□□□□ -1.66
CLK3-219ENST00000567805 KIAA1614Q5VZ46 1190 aa4.69□□□□□ -1.66
CLK3-219ENST00000567805 METRNLQ641Q3 311 aa4.69□□□□□ -1.66
CLK3-219ENST00000567805 ANKS6Q68DC2 871 aa4.69□□□□□ -1.66
CLK3-219ENST00000567805 DENND5AQ6IQ26 1287 aa4.69□□□□□ -1.66
CLK3-219ENST00000567805 CYB5D1Q6P9G0 228 aa4.69□□□□□ -1.66
CLK3-219ENST00000567805 KLHL35Q6PF15 583 aa4.69□□□□□ -1.66
CLK3-219ENST00000567805 TMEM220Q6QAJ8 160 aa4.69□□□□□ -1.66
CLK3-219ENST00000567805 XKR5Q6UX68 686 aa4.69□□□□□ -1.66
CLK3-219ENST00000567805 FAM83HQ6ZRV2 1179 aaPredicted RBP4.69□□□□□ -1.66
CLK3-219ENST00000567805 PRSS42Q7Z5A4 293 aa4.69□□□□□ -1.66
CLK3-219ENST00000567805 SNX20Q7Z614 316 aa4.69□□□□□ -1.66
CLK3-219ENST00000567805 VASH2Q86V25 355 aa4.69□□□□□ -1.66
CLK3-219ENST00000567805 NXPE1Q8N323 547 aa4.69□□□□□ -1.66
CLK3-219ENST00000567805 ZNF843Q8N446 348 aa4.69□□□□□ -1.66
CLK3-219ENST00000567805 IL22RA1Q8N6P7 574 aa4.69□□□□□ -1.66
CLK3-219ENST00000567805 BEND7Q8N7W2 519 aaPredicted RBP4.69□□□□□ -1.66
CLK3-219ENST00000567805 FAM71DQ8N9W8 422 aa4.69□□□□□ -1.66
CLK3-219ENST00000567805 OR13C4Q8NGS5 318 aa4.69□□□□□ -1.66
CLK3-219ENST00000567805 OR2L2Q8NH16 312 aa4.69□□□□□ -1.66
CLK3-219ENST00000567805 SLC35B2Q8TB61 432 aa4.69□□□□□ -1.66
CLK3-219ENST00000567805 HEXDCQ8WVB3 486 aa4.69□□□□□ -1.66
CLK3-219ENST00000567805 ZFPM2Q8WW38 1151 aa4.69□□□□□ -1.66
CLK3-219ENST00000567805 NKD1Q969G9 470 aa4.69□□□□□ -1.66
CLK3-219ENST00000567805 PMEPA1Q969W9 287 aa4.69□□□□□ -1.66
CLK3-219ENST00000567805 ULK4Q96C45 1275 aa4.69□□□□□ -1.66
CLK3-219ENST00000567805 RTP4Q96DX8 246 aa4.69□□□□□ -1.66
CLK3-219ENST00000567805 DCUN1D1Q96GG9 259 aa4.69□□□□□ -1.66
CLK3-219ENST00000567805 ZDHHC12Q96GR4 267 aa4.69□□□□□ -1.66
CLK3-219ENST00000567805 LINC00615Q96LM1 132 aaPredicted RBP4.69□□□□□ -1.66
CLK3-219ENST00000567805 C9orf72Q96LT7 481 aa4.69□□□□□ -1.66
CLK3-219ENST00000567805 TGM7Q96PF1 710 aa4.69□□□□□ -1.66
CLK3-219ENST00000567805 APOL2Q9BQE5 337 aa4.69□□□□□ -1.66
CLK3-219ENST00000567805 TMEM121Q9BTD3 319 aa4.69□□□□□ -1.66
CLK3-219ENST00000567805 FRMD8P1Q9BZ68 369 aaPredicted RBP4.69□□□□□ -1.66
CLK3-219ENST00000567805 RAB33BQ9H082 229 aa4.69□□□□□ -1.66
CLK3-219ENST00000567805 ZNF768Q9H5H4 540 aaKnown RBP4.69□□□□□ -1.66
CLK3-219ENST00000567805 ASB8Q9H765 288 aa4.69□□□□□ -1.66
CLK3-219ENST00000567805 LRRC40Q9H9A6 602 aa4.69□□□□□ -1.66
CLK3-219ENST00000567805 VPS37BQ9H9H4 285 aa4.69□□□□□ -1.66
CLK3-219ENST00000567805 SIDT1Q9NXL6 827 aaKnown RBP4.69□□□□□ -1.66
CLK3-219ENST00000567805 OGFRQ9NZT2 677 aa4.69□□□□□ -1.66
CLK3-219ENST00000567805 EPHA6Q9UF33 1036 aa4.69□□□□□ -1.66
CLK3-219ENST00000567805 KLHL3Q9UH77 587 aa4.69□□□□□ -1.66
CLK3-219ENST00000567805 FKBPLQ9UIM3 349 aa4.69□□□□□ -1.66
CLK3-219ENST00000567805 CRLS1Q9UJA2 301 aa4.69□□□□□ -1.66
CLK3-219ENST00000567805 PILRAQ9UKJ1 303 aa4.69□□□□□ -1.66
CLK3-219ENST00000567805 ACSL5Q9ULC5 683 aa4.69□□□□□ -1.66
CLK3-219ENST00000567805 WDR37Q9Y2I8 494 aa4.69□□□□□ -1.66
CLK3-219ENST00000567805 R3HDM2Q9Y2K5 976 aaKnown RBP4.69□□□□□ -1.66
CLK3-219ENST00000567805 SLC30A1Q9Y6M5 507 aa4.69□□□□□ -1.66
CLK3-219ENST00000567805 CAPN6Q9Y6Q1 641 aa4.69□□□□□ -1.66
CLK3-219ENST00000567805 CFAP46Q8IYW2 2715 aa4.69□□□□□ -1.66
CLK3-219ENST00000567805 BAHCC1Q9P281 2608 aa4.68□□□□□ -1.66
CLK3-219ENST00000567805 IGLV3-16A0A075B6K0 115 aa4.68□□□□□ -1.66
CLK3-219ENST00000567805 TRBV5-4A0A0C4DH59 114 aa4.68□□□□□ -1.66
CLK3-219ENST00000567805 C17orf113A0A1B0GUU1 675 aa4.68□□□□□ -1.66
CLK3-219ENST00000567805 TCRBV7S2A1N4TA0A589 114 aa4.68□□□□□ -1.66
CLK3-219ENST00000567805 POM121CA8CG34 1229 aa4.68□□□□□ -1.66
CLK3-219ENST00000567805 ERI2A8K979 691 aaKnown RBP4.68□□□□□ -1.66
CLK3-219ENST00000567805 CFAP99D6REC4 459 aa4.68□□□□□ -1.66
CLK3-219ENST00000567805 ARHGAP6O43182 974 aa4.68□□□□□ -1.66
CLK3-219ENST00000567805 SGTAO43765 313 aa4.68□□□□□ -1.66
CLK3-219ENST00000567805 LIASO43766 372 aa4.68□□□□□ -1.66
CLK3-219ENST00000567805 RAD1O60671 282 aa4.68□□□□□ -1.66
CLK3-219ENST00000567805 RASSF9O75901 435 aa4.68□□□□□ -1.66
CLK3-219ENST00000567805 STK17BO94768 372 aa4.68□□□□□ -1.66
CLK3-219ENST00000567805 METTL18O95568 372 aa4.68□□□□□ -1.66
CLK3-219ENST00000567805 GSTM1P09488 218 aa4.68□□□□□ -1.66
CLK3-219ENST00000567805 SLC35G4P0C7Q5 338 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms