RNA–Protein interactions for RNA: ENST00000565966.5

HERPUD1-210, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-210ENST00000565966 SEMA3AQ14563 771 aa13.57□□□□□ -0.24
HERPUD1-210ENST00000565966 ITIH4Q14624 930 aa13.57□□□□□ -0.24
HERPUD1-210ENST00000565966 SEPT7Q16181 437 aaKnown RBP13.57□□□□□ -0.24
HERPUD1-210ENST00000565966 MAP9Q49MG5 647 aa13.57□□□□□ -0.24
HERPUD1-210ENST00000565966 BCL7AQ4VC05 210 aa13.57□□□□□ -0.24
HERPUD1-210ENST00000565966 C3orf38Q5JPI3 329 aa13.57□□□□□ -0.24
HERPUD1-210ENST00000565966 ARMC3Q5W041 872 aa13.57□□□□□ -0.24
HERPUD1-210ENST00000565966 METRNLQ641Q3 311 aa13.57□□□□□ -0.24
HERPUD1-210ENST00000565966 HIBCHQ6NVY1 386 aaPredicted RBP13.57□□□□□ -0.24
HERPUD1-210ENST00000565966 CASC4Q6P4E1 433 aa13.57□□□□□ -0.24
HERPUD1-210ENST00000565966 USP53Q70EK8 1073 aa13.57□□□□□ -0.24
HERPUD1-210ENST00000565966 HOOK3Q86VS8 718 aa13.57□□□□□ -0.24
HERPUD1-210ENST00000565966 TRIM48Q8IWZ4 208 aa13.57□□□□□ -0.24
HERPUD1-210ENST00000565966 BEND7Q8N7W2 519 aaPredicted RBP13.57□□□□□ -0.24
HERPUD1-210ENST00000565966 OR4L1Q8NH43 312 aa13.57□□□□□ -0.24
HERPUD1-210ENST00000565966 AHCYL2Q96HN2 611 aaKnown RBP13.57□□□□□ -0.24
HERPUD1-210ENST00000565966 SIGLEC10Q96LC7 697 aa13.57□□□□□ -0.24
HERPUD1-210ENST00000565966 LINC00615Q96LM1 132 aaPredicted RBP13.57□□□□□ -0.24
HERPUD1-210ENST00000565966 DPYSL5Q9BPU6 564 aa13.57□□□□□ -0.24
HERPUD1-210ENST00000565966 TRIM56Q9BRZ2 755 aaKnown RBP13.57□□□□□ -0.24
HERPUD1-210ENST00000565966 TRIM31Q9BZY9 425 aa13.57□□□□□ -0.24
HERPUD1-210ENST00000565966 RDH14Q9HBH5 336 aa13.57□□□□□ -0.24
HERPUD1-210ENST00000565966 EPB41L5Q9HCM4 733 aa13.57□□□□□ -0.24
HERPUD1-210ENST00000565966 ZNF624Q9P2J8 865 aaPredicted RBP13.57□□□□□ -0.24
HERPUD1-210ENST00000565966 PCDHGA8Q9Y5G5 932 aa13.57□□□□□ -0.24
HERPUD1-210ENST00000565966 KMT2BQ9UMN6 2715 aaPredicted RBP13.56□□□□□ -0.24
HERPUD1-210ENST00000565966 MAGEB16A2A368 324 aa13.56□□□□□ -0.24
HERPUD1-210ENST00000565966 SRRM3A6NNA2 597 aaPredicted RBP13.56□□□□□ -0.24
HERPUD1-210ENST00000565966 EFCAB8A8MWE9 144 aa13.56□□□□□ -0.24
HERPUD1-210ENST00000565966 DXOO77932 396 aaKnown RBP13.56□□□□□ -0.24
HERPUD1-210ENST00000565966 SEC31AO94979 1220 aaKnown RBP13.56□□□□□ -0.24
HERPUD1-210ENST00000565966 ARNTP27540 789 aa13.56□□□□□ -0.24
HERPUD1-210ENST00000565966 HALP42357 657 aa13.56□□□□□ -0.24
HERPUD1-210ENST00000565966 PRLHRP49683 370 aa13.56□□□□□ -0.24
HERPUD1-210ENST00000565966 EPHA4P54764 986 aa13.56□□□□□ -0.24
HERPUD1-210ENST00000565966 UBE2IP63279 158 aaKnown RBP13.56□□□□□ -0.24
HERPUD1-210ENST00000565966 NFE2L1Q14494 772 aa13.56□□□□□ -0.24
HERPUD1-210ENST00000565966 CLCA4Q14CN2 919 aa13.56□□□□□ -0.24
HERPUD1-210ENST00000565966 MORF4L2Q15014 288 aa13.56□□□□□ -0.24
HERPUD1-210ENST00000565966 NKAIN2Q5VXU1 208 aa13.56□□□□□ -0.24
HERPUD1-210ENST00000565966 IGF2-ASQ6U949 168 aa13.56□□□□□ -0.24
HERPUD1-210ENST00000565966 RAB11FIP2Q7L804 512 aa13.56□□□□□ -0.24
HERPUD1-210ENST00000565966 TMPRSS9Q7Z410 1059 aa13.56□□□□□ -0.24
HERPUD1-210ENST00000565966 MAATS1Q7Z4T9 603 aa13.56□□□□□ -0.24
HERPUD1-210ENST00000565966 ZNF761Q86XN6 746 aaPredicted RBP13.56□□□□□ -0.24
HERPUD1-210ENST00000565966 SLITRK4Q8IW52 837 aa13.56□□□□□ -0.24
HERPUD1-210ENST00000565966 OR2L2Q8NH16 312 aa13.56□□□□□ -0.24
HERPUD1-210ENST00000565966 OR10G6Q8NH81 332 aa13.56□□□□□ -0.24
HERPUD1-210ENST00000565966 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.56□□□□□ -0.24
HERPUD1-210ENST00000565966 TMEM159Q96B96 161 aa13.56□□□□□ -0.24
HERPUD1-210ENST00000565966 SNF8Q96H20 258 aa13.56□□□□□ -0.24
HERPUD1-210ENST00000565966 ZNF578Q96N58 590 aaPredicted RBP13.56□□□□□ -0.24
HERPUD1-210ENST00000565966 SLC46A1Q96NT5 459 aa13.56□□□□□ -0.24
HERPUD1-210ENST00000565966 NUDT22Q9BRQ3 303 aa13.56□□□□□ -0.24
HERPUD1-210ENST00000565966 UCK1Q9HA47 277 aa13.56□□□□□ -0.24
HERPUD1-210ENST00000565966 POT1Q9NUX5 634 aa13.56□□□□□ -0.24
HERPUD1-210ENST00000565966 SAMD15Q9P1V8 674 aa13.56□□□□□ -0.24
HERPUD1-210ENST00000565966 MARCH4Q9P2E8 410 aaPredicted RBP13.56□□□□□ -0.24
HERPUD1-210ENST00000565966 ACSL5Q9ULC5 683 aa13.56□□□□□ -0.24
HERPUD1-210ENST00000565966 SNX24Q9Y343 169 aa13.56□□□□□ -0.24
HERPUD1-210ENST00000565966 C17orf113A0A1B0GUU1 675 aa13.55□□□□□ -0.24
HERPUD1-210ENST00000565966 FAM237BA0A1B0GVD1 139 aa13.55□□□□□ -0.24
HERPUD1-210ENST00000565966 A0A1W2PNU3 283 aaPredicted RBP13.55□□□□□ -0.24
HERPUD1-210ENST00000565966 LILRA5A6NI73 299 aa13.55□□□□□ -0.24
HERPUD1-210ENST00000565966 TP73O15350 636 aa13.55□□□□□ -0.24
HERPUD1-210ENST00000565966 DUX1O43812 170 aa13.55□□□□□ -0.24
HERPUD1-210ENST00000565966 VAPBO95292 243 aa13.55□□□□□ -0.24
HERPUD1-210ENST00000565966 RBMS1P29558 406 aaKnown RBP13.55□□□□□ -0.24
HERPUD1-210ENST00000565966 PBLDP30039 288 aaPredicted RBP13.55□□□□□ -0.24
HERPUD1-210ENST00000565966 NSG1P42857 185 aa13.55□□□□□ -0.24
HERPUD1-210ENST00000565966 RPL21P46778 160 aaKnown RBP13.55□□□□□ -0.24
HERPUD1-210ENST00000565966 ARCN1P48444 511 aaKnown RBP13.55□□□□□ -0.24
HERPUD1-210ENST00000565966 PPM1FP49593 454 aaPredicted RBP13.55□□□□□ -0.24
HERPUD1-210ENST00000565966 LIMK2P53671 638 aa13.55□□□□□ -0.24
HERPUD1-210ENST00000565966 ITGA8P53708 1063 aa13.55□□□□□ -0.24
HERPUD1-210ENST00000565966 WHAMMP3Q1A5X7 153 aa13.55□□□□□ -0.24
HERPUD1-210ENST00000565966 TBC1D25Q3MII6 688 aa13.55□□□□□ -0.24
HERPUD1-210ENST00000565966 ANKRD20A4Q4UJ75 823 aa13.55□□□□□ -0.24
HERPUD1-210ENST00000565966 FASTKD1Q53R41 847 aaKnown RBP13.55□□□□□ -0.24
HERPUD1-210ENST00000565966 PHF19Q5T6S3 580 aa13.55□□□□□ -0.24
HERPUD1-210ENST00000565966 LYPLAL1Q5VWZ2 237 aa13.55□□□□□ -0.24
HERPUD1-210ENST00000565966 KIAA0930Q6ICG6 404 aaPredicted RBP13.55□□□□□ -0.24
HERPUD1-210ENST00000565966 TMEM71Q6P5X7 295 aa13.55□□□□□ -0.24
HERPUD1-210ENST00000565966 FOXR1Q6PIV2 292 aa13.55□□□□□ -0.24
HERPUD1-210ENST00000565966 XKR5Q6UX68 686 aa13.55□□□□□ -0.24
HERPUD1-210ENST00000565966 PACS1Q6VY07 963 aa13.55□□□□□ -0.24
HERPUD1-210ENST00000565966 CERS6Q6ZMG9 384 aa13.55□□□□□ -0.24
HERPUD1-210ENST00000565966 ZNF574Q6ZN55 896 aaPredicted RBP13.55□□□□□ -0.24
HERPUD1-210ENST00000565966 FAM83HQ6ZRV2 1179 aaPredicted RBP13.55□□□□□ -0.24
HERPUD1-210ENST00000565966 TMEM26Q6ZUK4 368 aa13.55□□□□□ -0.24
HERPUD1-210ENST00000565966 TMEM135Q86UB9 458 aa13.55□□□□□ -0.24
HERPUD1-210ENST00000565966 RBM12BQ8IXT5 1001 aaKnown RBP13.55□□□□□ -0.24
HERPUD1-210ENST00000565966 FBXO39Q8N4B4 442 aa13.55□□□□□ -0.24
HERPUD1-210ENST00000565966 CLDN19Q8N6F1 224 aa13.55□□□□□ -0.24
HERPUD1-210ENST00000565966 OR4D9Q8NGE8 314 aa13.55□□□□□ -0.24
HERPUD1-210ENST00000565966 FGF11Q92914 225 aa13.55□□□□□ -0.24
HERPUD1-210ENST00000565966 CXorf40BQ96DE9 158 aa13.55□□□□□ -0.24
HERPUD1-210ENST00000565966 PRR11Q96HE9 360 aaPredicted RBP13.55□□□□□ -0.24
HERPUD1-210ENST00000565966 FCRL3Q96P31 734 aaPredicted RBP13.55□□□□□ -0.24
HERPUD1-210ENST00000565966 TTC1Q99614 292 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms