RNA–Protein interactions for RNA: ENST00000565003.5

CMTM3-209, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-209ENST00000565003 TMPRSS15P98073 1019 aa9.82□□□□□ -0.84
CMTM3-209ENST00000565003 FOXM1Q08050 763 aa9.82□□□□□ -0.84
CMTM3-209ENST00000565003 KIF5AQ12840 1032 aa9.82□□□□□ -0.84
CMTM3-209ENST00000565003 TBR1Q16650 682 aa9.82□□□□□ -0.84
CMTM3-209ENST00000565003 BCL7AQ4VC05 210 aa9.82□□□□□ -0.84
CMTM3-209ENST00000565003 METRNLQ641Q3 311 aa9.82□□□□□ -0.84
CMTM3-209ENST00000565003 KCTD11Q693B1 232 aa9.82□□□□□ -0.84
CMTM3-209ENST00000565003 IRGCQ6NXR0 463 aa9.82□□□□□ -0.84
CMTM3-209ENST00000565003 DUS1LQ6P1R4 473 aaKnown RBP9.82□□□□□ -0.84
CMTM3-209ENST00000565003 ARHGEF18Q6ZSZ5 1173 aa9.82□□□□□ -0.84
CMTM3-209ENST00000565003 FAM92BQ6ZTR7 304 aa9.82□□□□□ -0.84
CMTM3-209ENST00000565003 PRSS42Q7Z5A4 293 aa9.82□□□□□ -0.84
CMTM3-209ENST00000565003 UNC5BQ8IZJ1 945 aa9.82□□□□□ -0.84
CMTM3-209ENST00000565003 SYCE1Q8N0S2 351 aa9.82□□□□□ -0.84
CMTM3-209ENST00000565003 LILRA3Q8N6C8 439 aaPredicted RBP9.82□□□□□ -0.84
CMTM3-209ENST00000565003 UBL4BQ8N7F7 174 aa9.82□□□□□ -0.84
CMTM3-209ENST00000565003 FAM71DQ8N9W8 422 aa9.82□□□□□ -0.84
CMTM3-209ENST00000565003 SPC24Q8NBT2 197 aa9.82□□□□□ -0.84
CMTM3-209ENST00000565003 SPDYE1Q8NFV5 336 aaPredicted RBP9.82□□□□□ -0.84
CMTM3-209ENST00000565003 SLC35B2Q8TB61 432 aa9.82□□□□□ -0.84
CMTM3-209ENST00000565003 ZNF514Q96K75 400 aaPredicted RBP9.82□□□□□ -0.84
CMTM3-209ENST00000565003 DNAJC1Q96KC8 554 aaKnown RBP9.82□□□□□ -0.84
CMTM3-209ENST00000565003 ZPBPQ9BS86 351 aa9.82□□□□□ -0.84
CMTM3-209ENST00000565003 WWP1Q9H0M0 922 aa9.82□□□□□ -0.84
CMTM3-209ENST00000565003 FAM96AQ9H5X1 160 aa9.82□□□□□ -0.84
CMTM3-209ENST00000565003 IMP3Q9NV31 184 aaKnown RBP9.82□□□□□ -0.84
CMTM3-209ENST00000565003 FAM8A1Q9UBU6 413 aa9.82□□□□□ -0.84
CMTM3-209ENST00000565003 CRLS1Q9UJA2 301 aa9.82□□□□□ -0.84
CMTM3-209ENST00000565003 CFAP20Q9Y6A4 193 aaKnown RBP9.82□□□□□ -0.84
CMTM3-209ENST00000565003 DNMT3AQ9Y6K1 912 aaPredicted RBP9.82□□□□□ -0.84
CMTM3-209ENST00000565003 GOLGA6L9A6NEM1 432 aa9.81□□□□□ -0.84
CMTM3-209ENST00000565003 MGAT4DA6NG13 374 aa9.81□□□□□ -0.84
CMTM3-209ENST00000565003 B8ZZF3 427 aa9.81□□□□□ -0.84
CMTM3-209ENST00000565003 PTMAP06454 111 aaKnown RBP9.81□□□□□ -0.84
CMTM3-209ENST00000565003 PRSS56P0CW18 603 aa9.81□□□□□ -0.84
CMTM3-209ENST00000565003 MTHFD1P11586 935 aaKnown RBP9.81□□□□□ -0.84
CMTM3-209ENST00000565003 ITGB6P18564 788 aa9.81□□□□□ -0.84
CMTM3-209ENST00000565003 CDKN1CP49918 316 aaPredicted RBP9.81□□□□□ -0.84
CMTM3-209ENST00000565003 PARP6Q2NL67 630 aa9.81□□□□□ -0.84
CMTM3-209ENST00000565003 CACHD1Q5VU97 1274 aa9.81□□□□□ -0.84
CMTM3-209ENST00000565003 NXPE1Q8N323 547 aa9.81□□□□□ -0.84
CMTM3-209ENST00000565003 TAB3Q8N5C8 712 aaPredicted RBP9.81□□□□□ -0.84
CMTM3-209ENST00000565003 TTC13Q8NBP0 860 aa9.81□□□□□ -0.84
CMTM3-209ENST00000565003 OR2L2Q8NH16 312 aa9.81□□□□□ -0.84
CMTM3-209ENST00000565003 KLHL6Q8WZ60 621 aa9.81□□□□□ -0.84
CMTM3-209ENST00000565003 ZDHHC12Q96GR4 267 aa9.81□□□□□ -0.84
CMTM3-209ENST00000565003 HES6Q96HZ4 224 aa9.81□□□□□ -0.84
CMTM3-209ENST00000565003 LINC00615Q96LM1 132 aaPredicted RBP9.81□□□□□ -0.84
CMTM3-209ENST00000565003 PPP1R2P1Q96PQ5 205 aa9.81□□□□□ -0.84
CMTM3-209ENST00000565003 OR6C1Q96RD1 312 aa9.81□□□□□ -0.84
CMTM3-209ENST00000565003 INSM2Q96T92 566 aaPredicted RBP9.81□□□□□ -0.84
CMTM3-209ENST00000565003 ARHGAP9Q9BRR9 750 aa9.81□□□□□ -0.84
CMTM3-209ENST00000565003 TMEM121Q9BTD3 319 aa9.81□□□□□ -0.84
CMTM3-209ENST00000565003 ULBP3Q9BZM4 244 aa9.81□□□□□ -0.84
CMTM3-209ENST00000565003 RAB33BQ9H082 229 aa9.81□□□□□ -0.84
CMTM3-209ENST00000565003 GPN2Q9H9Y4 310 aaPredicted RBP9.81□□□□□ -0.84
CMTM3-209ENST00000565003 PIH1D1Q9NWS0 290 aaKnown RBP9.81□□□□□ -0.84
CMTM3-209ENST00000565003 IMPACTQ9P2X3 320 aa9.81□□□□□ -0.84
CMTM3-209ENST00000565003 EPHA6Q9UF33 1036 aa9.81□□□□□ -0.84
CMTM3-209ENST00000565003 IL17BQ9UHF5 180 aa9.81□□□□□ -0.84
CMTM3-209ENST00000565003 IGHV5-51A0A0C4DH38 117 aa9.8□□□□□ -0.84
CMTM3-209ENST00000565003 ZNF891A8MT65 544 aaPredicted RBP9.8□□□□□ -0.84
CMTM3-209ENST00000565003 NKX2-8O15522 239 aa9.8□□□□□ -0.84
CMTM3-209ENST00000565003 ZNF189O75820 626 aaPredicted RBP9.8□□□□□ -0.84
CMTM3-209ENST00000565003 ZIC2O95409 532 aaPredicted RBP9.8□□□□□ -0.84
CMTM3-209ENST00000565003 TPH1P17752 444 aa9.8□□□□□ -0.84
CMTM3-209ENST00000565003 ITGALP20701 1170 aa9.8□□□□□ -0.84
CMTM3-209ENST00000565003 MAP4P27816 1152 aaKnown RBP9.8□□□□□ -0.84
CMTM3-209ENST00000565003 MC4RP32245 332 aa9.8□□□□□ -0.84
CMTM3-209ENST00000565003 HADHAP40939 763 aa9.8□□□□□ -0.84
CMTM3-209ENST00000565003 PRLHRP49683 370 aa9.8□□□□□ -0.84
CMTM3-209ENST00000565003 PDE1BQ01064 536 aa9.8□□□□□ -0.84
CMTM3-209ENST00000565003 ABHD18Q0P651 414 aa9.8□□□□□ -0.84
CMTM3-209ENST00000565003 NFATC3Q12968 1075 aa9.8□□□□□ -0.84
CMTM3-209ENST00000565003 IL11RAQ14626 422 aa9.8□□□□□ -0.84
CMTM3-209ENST00000565003 KCNAB1Q14722 419 aa9.8□□□□□ -0.84
CMTM3-209ENST00000565003 POU6F1Q14863 301 aa9.8□□□□□ -0.84
CMTM3-209ENST00000565003 PLCL1Q15111 1095 aa9.8□□□□□ -0.84
CMTM3-209ENST00000565003 SNX20Q7Z614 316 aa9.8□□□□□ -0.84
CMTM3-209ENST00000565003 TXLNBQ8N3L3 684 aa9.8□□□□□ -0.84
CMTM3-209ENST00000565003 ATG4AQ8WYN0 398 aa9.8□□□□□ -0.84
CMTM3-209ENST00000565003 ULK4Q96C45 1275 aa9.8□□□□□ -0.84
CMTM3-209ENST00000565003 DCUN1D1Q96GG9 259 aa9.8□□□□□ -0.84
CMTM3-209ENST00000565003 ELMO2Q96JJ3 720 aa9.8□□□□□ -0.84
CMTM3-209ENST00000565003 SLC45A3Q96JT2 553 aa9.8□□□□□ -0.84
CMTM3-209ENST00000565003 SLC41A2Q96JW4 573 aa9.8□□□□□ -0.84
CMTM3-209ENST00000565003 RMDN2Q96LZ7 410 aa9.8□□□□□ -0.84
CMTM3-209ENST00000565003 C12orf66Q96MD2 445 aa9.8□□□□□ -0.84
CMTM3-209ENST00000565003 C19orf43Q9BQ61 176 aa9.8□□□□□ -0.84
CMTM3-209ENST00000565003 LRRC40Q9H9A6 602 aa9.8□□□□□ -0.84
CMTM3-209ENST00000565003 STARD5Q9NSY2 213 aa9.8□□□□□ -0.84
CMTM3-209ENST00000565003 SEMA5BQ9P283 1151 aa9.8□□□□□ -0.84
CMTM3-209ENST00000565003 FEZ2Q9UHY8 353 aaPredicted RBP9.8□□□□□ -0.84
CMTM3-209ENST00000565003 SLC24A2Q9UI40 661 aa9.8□□□□□ -0.84
CMTM3-209ENST00000565003 ACSL5Q9ULC5 683 aa9.8□□□□□ -0.84
CMTM3-209ENST00000565003 SPTA1P02549 2419 aa9.8□□□□□ -0.84
CMTM3-209ENST00000565003 TLN1Q9Y490 2541 aaKnown RBP9.79□□□□□ -0.84
CMTM3-209ENST00000565003 IGLV3-16A0A075B6K0 115 aa9.79□□□□□ -0.84
CMTM3-209ENST00000565003 TRBV5-4A0A0C4DH59 114 aa9.79□□□□□ -0.84
CMTM3-209ENST00000565003 CCDC78A2IDD5 438 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms