RNA–Protein interactions for RNA: ENST00000564970.1

PTPN9-204, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

TSL 5

Gene PTPN9, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-204ENST00000564970 GAB2Q9UQC2 676 aa6.23□□□□□ -1.41
PTPN9-204ENST00000564970 RUVBL1Q9Y265 456 aaKnown RBP6.23□□□□□ -1.41
PTPN9-204ENST00000564970 PCDHGA2Q9Y5H1 932 aa6.23□□□□□ -1.41
PTPN9-204ENST00000564970 CCDC88AQ3V6T2 1871 aa6.22□□□□□ -1.41
PTPN9-204ENST00000564970 ANKRD36CQ5JPF3 1778 aa6.22□□□□□ -1.41
PTPN9-204ENST00000564970 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.22□□□□□ -1.41
PTPN9-204ENST00000564970 A0A1B0GTW7 788 aa6.22□□□□□ -1.41
PTPN9-204ENST00000564970 USP17L5A8MUK1 530 aa6.22□□□□□ -1.41
PTPN9-204ENST00000564970 A8MXK9 166 aa6.22□□□□□ -1.41
PTPN9-204ENST00000564970 USP17L15C9J2P7 530 aa6.22□□□□□ -1.41
PTPN9-204ENST00000564970 USP17L12C9JPN9 530 aa6.22□□□□□ -1.41
PTPN9-204ENST00000564970 ANKRD63C9JTQ0 380 aa6.22□□□□□ -1.41
PTPN9-204ENST00000564970 USP17L11C9JVI0 530 aa6.22□□□□□ -1.41
PTPN9-204ENST00000564970 USP17L21D6R901 530 aa6.22□□□□□ -1.41
PTPN9-204ENST00000564970 USP17L18D6R9N7 530 aa6.22□□□□□ -1.41
PTPN9-204ENST00000564970 USP17L22D6RA61 530 aa6.22□□□□□ -1.41
PTPN9-204ENST00000564970 USP17L19D6RCP7 530 aa6.22□□□□□ -1.41
PTPN9-204ENST00000564970 USP17L20D6RJB6 530 aa6.22□□□□□ -1.41
PTPN9-204ENST00000564970 E5RI56 91 aa6.22□□□□□ -1.41
PTPN9-204ENST00000564970 F5H6K3 240 aa6.22□□□□□ -1.41
PTPN9-204ENST00000564970 LINC01387J3KSC0 135 aa6.22□□□□□ -1.41
PTPN9-204ENST00000564970 PDHXO00330 501 aa6.22□□□□□ -1.41
PTPN9-204ENST00000564970 POLRMTO00411 1230 aaKnown RBP6.22□□□□□ -1.41
PTPN9-204ENST00000564970 NUPL2O15504 423 aaKnown RBP6.22□□□□□ -1.41
PTPN9-204ENST00000564970 TREHO43280 583 aa6.22□□□□□ -1.41
PTPN9-204ENST00000564970 MITFO75030 526 aaPredicted RBP6.22□□□□□ -1.41
PTPN9-204ENST00000564970 KCNH1O95259 989 aa6.22□□□□□ -1.41
PTPN9-204ENST00000564970 TOP3BO95985 862 aaKnown RBP6.22□□□□□ -1.41
PTPN9-204ENST00000564970 LALBAP00709 142 aa6.22□□□□□ -1.41
PTPN9-204ENST00000564970 POMCP01189 267 aa6.22□□□□□ -1.41
PTPN9-204ENST00000564970 HK1P19367 917 aa6.22□□□□□ -1.41
PTPN9-204ENST00000564970 PAX6P26367 422 aa6.22□□□□□ -1.41
PTPN9-204ENST00000564970 KLRC2P26717 231 aa6.22□□□□□ -1.41
PTPN9-204ENST00000564970 ACVR2AP27037 513 aa6.22□□□□□ -1.41
PTPN9-204ENST00000564970 ATP5C1P36542 298 aaKnown RBP6.22□□□□□ -1.41
PTPN9-204ENST00000564970 CD86P42081 329 aa6.22□□□□□ -1.41
PTPN9-204ENST00000564970 RPL35P42766 123 aaKnown RBP6.22□□□□□ -1.41
PTPN9-204ENST00000564970 RPS9P46781 194 aaKnown RBP6.22□□□□□ -1.41
PTPN9-204ENST00000564970 GABRB2P47870 512 aa6.22□□□□□ -1.41
PTPN9-204ENST00000564970 NUDT2P50583 147 aa6.22□□□□□ -1.41
PTPN9-204ENST00000564970 SLC7A2P52569 658 aa6.22□□□□□ -1.41
PTPN9-204ENST00000564970 ZNF143P52747 638 aaPredicted RBP6.22□□□□□ -1.41
PTPN9-204ENST00000564970 GPX6P59796 221 aa6.22□□□□□ -1.41
PTPN9-204ENST00000564970 MAT1AQ00266 395 aaKnown RBP6.22□□□□□ -1.41
PTPN9-204ENST00000564970 PURAQ00577 322 aaKnown RBP6.22□□□□□ -1.41
PTPN9-204ENST00000564970 USP17L24Q0WX57 530 aa6.22□□□□□ -1.41
PTPN9-204ENST00000564970 UBAP2LQ14157 1087 aaKnown RBP6.22□□□□□ -1.41
PTPN9-204ENST00000564970 POLD3Q15054 466 aaPredicted RBP6.22□□□□□ -1.41
PTPN9-204ENST00000564970 QPRTQ15274 297 aa6.22□□□□□ -1.41
PTPN9-204ENST00000564970 CHI3L2Q15782 390 aa6.22□□□□□ -1.41
PTPN9-204ENST00000564970 HLFQ16534 295 aa6.22□□□□□ -1.41
PTPN9-204ENST00000564970 HIF1AQ16665 826 aa6.22□□□□□ -1.41
PTPN9-204ENST00000564970 LRRC26Q2I0M4 334 aa6.22□□□□□ -1.41
PTPN9-204ENST00000564970 TIMM50Q3ZCQ8 353 aa6.22□□□□□ -1.41
PTPN9-204ENST00000564970 HSF5Q4G112 596 aaPredicted RBP6.22□□□□□ -1.41
PTPN9-204ENST00000564970 Q5BKY6 102 aa6.22□□□□□ -1.41
PTPN9-204ENST00000564970 COLEC12Q5KU26 742 aa6.22□□□□□ -1.41
PTPN9-204ENST00000564970 TPRG1LQ5T0D9 272 aa6.22□□□□□ -1.41
PTPN9-204ENST00000564970 MANEALQ5VSG8 457 aa6.22□□□□□ -1.41
PTPN9-204ENST00000564970 FAM160B1Q5W0V3 765 aa6.22□□□□□ -1.41
PTPN9-204ENST00000564970 KDM4DQ6B0I6 523 aa6.22□□□□□ -1.41
PTPN9-204ENST00000564970 TMEM132EQ6IEE7 984 aa6.22□□□□□ -1.41
PTPN9-204ENST00000564970 SLC25A25Q6KCM7 469 aa6.22□□□□□ -1.41
PTPN9-204ENST00000564970 LIN54Q6MZP7 749 aa6.22□□□□□ -1.41
PTPN9-204ENST00000564970 SCYL2Q6P3W7 929 aa6.22□□□□□ -1.41
PTPN9-204ENST00000564970 LRFN4Q6PJG9 635 aa6.22□□□□□ -1.41
PTPN9-204ENST00000564970 VITQ6UXI7 678 aa6.22□□□□□ -1.41
PTPN9-204ENST00000564970 STRADAQ7RTN6 431 aa6.22□□□□□ -1.41
PTPN9-204ENST00000564970 USP17L1Q7RTZ2 530 aa6.22□□□□□ -1.41
PTPN9-204ENST00000564970 SYVN1Q86TM6 617 aa6.22□□□□□ -1.41
PTPN9-204ENST00000564970 FJX1Q86VR8 437 aa6.22□□□□□ -1.41
PTPN9-204ENST00000564970 SLC26A11Q86WA9 606 aa6.22□□□□□ -1.41
PTPN9-204ENST00000564970 KRT73Q86Y46 540 aa6.22□□□□□ -1.41
PTPN9-204ENST00000564970 MCATQ8IVS2 390 aaKnown RBP6.22□□□□□ -1.41
PTPN9-204ENST00000564970 SLC35F3Q8IY50 421 aa6.22□□□□□ -1.41
PTPN9-204ENST00000564970 ADGRG2Q8IZP9 1017 aa6.22□□□□□ -1.41
PTPN9-204ENST00000564970 TNS4Q8IZW8 715 aa6.22□□□□□ -1.41
PTPN9-204ENST00000564970 SPATA6LQ8N4H0 392 aa6.22□□□□□ -1.41
PTPN9-204ENST00000564970 LRRC17Q8N6Y2 441 aa6.22□□□□□ -1.41
PTPN9-204ENST00000564970 DNAJC5GQ8N7S2 189 aa6.22□□□□□ -1.41
PTPN9-204ENST00000564970 KIAA0895Q8NCT3 520 aa6.22□□□□□ -1.41
PTPN9-204ENST00000564970 GOT1L1Q8NHS2 421 aaPredicted RBP6.22□□□□□ -1.41
PTPN9-204ENST00000564970 WDR36Q8NI36 951 aaKnown RBP6.22□□□□□ -1.41
PTPN9-204ENST00000564970 ST7LQ8TDW4 575 aa6.22□□□□□ -1.41
PTPN9-204ENST00000564970 PPP1R13LQ8WUF5 828 aa6.22□□□□□ -1.41
PTPN9-204ENST00000564970 JDP2Q8WYK2 163 aa6.22□□□□□ -1.41
PTPN9-204ENST00000564970 DCPSQ96C86 337 aaKnown RBP6.22□□□□□ -1.41
PTPN9-204ENST00000564970 YIPF6Q96EC8 236 aa6.22□□□□□ -1.41
PTPN9-204ENST00000564970 NODALQ96S42 347 aa6.22□□□□□ -1.41
PTPN9-204ENST00000564970 CCNL2Q96S94 520 aaPredicted RBP6.22□□□□□ -1.41
PTPN9-204ENST00000564970 AGAP2Q99490 1192 aa6.22□□□□□ -1.41
PTPN9-204ENST00000564970 INPP5KQ9BT40 448 aa6.22□□□□□ -1.41
PTPN9-204ENST00000564970 SYT11Q9BT88 431 aa6.22□□□□□ -1.41
PTPN9-204ENST00000564970 C1QTNF1Q9BXJ1 281 aa6.22□□□□□ -1.41
PTPN9-204ENST00000564970 TINAGL1Q9GZM7 467 aaPredicted RBP6.22□□□□□ -1.41
PTPN9-204ENST00000564970 REXO4Q9GZR2 422 aaKnown RBP6.22□□□□□ -1.41
PTPN9-204ENST00000564970 BTBD1Q9H0C5 482 aa6.22□□□□□ -1.41
PTPN9-204ENST00000564970 FOLH1BQ9HBA9 442 aa6.22□□□□□ -1.41
PTPN9-204ENST00000564970 PCDH9Q9HC56 1237 aa6.22□□□□□ -1.41
PTPN9-204ENST00000564970 MYOZ1Q9NP98 299 aaPredicted RBP6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms