RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 SERPINB8P50452 374 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 CHN2P52757 468 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 ACLYP53396 1101 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 CCINQ13939 588 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 PLEKHN1Q494U1 663 aaPredicted RBP3.32□□□□□ -1.88
CHD9-213ENST00000564845 VARS2Q5ST30 1063 aaKnown RBP3.32□□□□□ -1.88
CHD9-213ENST00000564845 NECAB2Q7Z6G3 386 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 LILRA3Q8N6C8 439 aaPredicted RBP3.32□□□□□ -1.88
CHD9-213ENST00000564845 SYT4Q9H2B2 425 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 BRD9Q9H8M2 597 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 TIMMDC1Q9NPL8 285 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 ARHGEF4Q9NR80 690 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 HEMK1Q9Y5R4 338 aaPredicted RBP3.32□□□□□ -1.88
CHD9-213ENST00000564845 PRAMEF33A0A0G2JMD5 474 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 PRRG1O14668 218 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 KRT6AP02538 564 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 FESP07332 822 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 PRDX3P30048 256 aaKnown RBP3.32□□□□□ -1.88
CHD9-213ENST00000564845 ZNF143P52747 638 aaPredicted RBP3.32□□□□□ -1.88
CHD9-213ENST00000564845 AQP5P55064 265 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 SRSF11Q05519 484 aaKnown RBP3.32□□□□□ -1.88
CHD9-213ENST00000564845 CDH17Q12864 832 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 BNIP2Q12982 314 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 SLC9B1Q4ZJI4 515 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 ZCCHC12Q6PEW1 402 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 AHSA2Q719I0 299 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 ZNF534Q76KX8 674 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 APCDD1Q8J025 514 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 SEMA6AQ9H2E6 1030 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 TMEM134Q9H6X4 195 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 PLGRKTQ9HBL7 147 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 ZFP57Q9NU63 452 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 STYXL1Q9Y6J8 313 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 VPS26AO75436 327 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 BAG2O95816 211 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 URODP06132 367 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 PEPDP12955 493 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 ITGALP20701 1170 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 IL12AP29459 219 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 SLC26A3P40879 764 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 FOXA1P55317 472 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 TWF1Q12792 350 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 CSHL1Q14406 222 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 DGKKQ5KSL6 1271 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 ZNF783Q6ZMS7 281 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 FUBP3Q96I24 572 aaKnown RBP eCLIP3.32□□□□□ -1.881e-6■■□□□ 12.9
CHD9-213ENST00000564845 CLCC1Q96S66 551 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 PRRX2Q99811 253 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 TBC1D10AQ9BXI6 508 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 LRRC19Q9H756 370 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 MRM3Q9HC36 420 aaKnown RBP3.32□□□□□ -1.88
CHD9-213ENST00000564845 HEY2Q9UBP5 337 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 CDH7Q9ULB5 785 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 SMAD6O43541 496 aaKnown RBP3.32□□□□□ -1.88
CHD9-213ENST00000564845 TULP3O75386 442 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 LYNP07948 512 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 COL6A2P12110 1019 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 BMP4P12644 408 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 MSH3P20585 1137 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 DRG2P55039 364 aaKnown RBP3.32□□□□□ -1.88
CHD9-213ENST00000564845 BTKQ06187 659 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 C1QBPQ07021 282 aaKnown RBP3.32□□□□□ -1.88
CHD9-213ENST00000564845 ITIH4Q14624 930 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 TRAM1Q15629 374 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 ZNF284Q2VY69 593 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 ARMC6Q6NXE6 501 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 TRIM74Q86UV6 250 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 EGFL6Q8IUX8 553 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 NUP93Q8N1F7 819 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 PGBD5Q8N414 524 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 ATPAF2Q8N5M1 289 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 MAPK15Q8TD08 544 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 CAPSLQ8WWF8 208 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 OIT3Q8WWZ8 545 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 NXNL1Q96CM4 212 aa3.32□□□□□ -1.88
CHD9-213ENST00000564845 CAPN8A6NHC0 703 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 C5orf58C9J3I9 102 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 ERCC1P07992 297 aaPredicted RBP3.31□□□□□ -1.88
CHD9-213ENST00000564845 OR1E1P30953 314 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 SCTRP47872 440 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 SLC11A1P49279 550 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 FBXO42Q6P3S6 717 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 ADGRD2Q7Z7M1 963 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 PHTF2Q8N3S3 785 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 BRSK1Q8TDC3 778 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 PYDC1Q8WXC3 89 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 CENPTQ96BT3 561 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 HDAC11Q96DB2 347 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 NPAS2Q99743 824 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 C3orf18Q9UK00 162 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 CARD8Q9Y2G2 431 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 ASB1Q9Y576 335 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 PCDHB7Q9Y5E2 793 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 DFNA5O60443 496 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 TPST1O60507 370 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 CYB5AP00167 134 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 ABHD2P08910 425 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 TAS2R43P59537 309 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 NFE2L1Q14494 772 aa3.31□□□□□ -1.88
CHD9-213ENST00000564845 RASA2Q15283 850 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms