RNA–Protein interactions for RNA: ENST00000564578.5

KARS-204, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 5

Gene KARS, Length 1,942 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-204ENST00000564578 NAPRTQ6XQN6 538 aa12.25□□□□□ -0.45
KARS-204ENST00000564578 LRRC6Q86X45 466 aa12.25□□□□□ -0.45
KARS-204ENST00000564578 KRT222Q8N1A0 295 aa12.25□□□□□ -0.45
KARS-204ENST00000564578 FAM46DQ8NEK8 389 aa12.25□□□□□ -0.45
KARS-204ENST00000564578 OR4C6Q8NH72 309 aa12.25□□□□□ -0.45
KARS-204ENST00000564578 AENQ8WTP8 325 aaKnown RBP12.25□□□□□ -0.45
KARS-204ENST00000564578 CAMK1GQ96NX5 476 aa12.25□□□□□ -0.45
KARS-204ENST00000564578 CCM2Q9BSQ5 444 aa12.25□□□□□ -0.45
KARS-204ENST00000564578 GSDMCQ9BYG8 508 aa12.25□□□□□ -0.45
KARS-204ENST00000564578 NLGN3Q9NZ94 848 aa12.25□□□□□ -0.45
KARS-204ENST00000564578 GALPQ9UBC7 116 aa12.25□□□□□ -0.45
KARS-204ENST00000564578 VPS9D1Q9Y2B5 631 aa12.25□□□□□ -0.45
KARS-204ENST00000564578 PCDHB1Q9Y5F3 818 aa12.25□□□□□ -0.45
KARS-204ENST00000564578 ZFC3H1O60293 1989 aaKnown RBP12.25□□□□□ -0.45
KARS-204ENST00000564578 QSOX1O00391 747 aa12.24□□□□□ -0.45
KARS-204ENST00000564578 PFDN6O15212 129 aa12.24□□□□□ -0.45
KARS-204ENST00000564578 RIPK2O43353 540 aa12.24□□□□□ -0.45
KARS-204ENST00000564578 CBFA2T3O75081 653 aa12.24□□□□□ -0.45
KARS-204ENST00000564578 NIPSNAP2O75323 286 aa12.24□□□□□ -0.45
KARS-204ENST00000564578 PKMP14618 531 aaKnown RBP12.24□□□□□ -0.45
KARS-204ENST00000564578 RPL10P27635 214 aaKnown RBP12.24□□□□□ -0.45
KARS-204ENST00000564578 STX2P32856 288 aa12.24□□□□□ -0.45
KARS-204ENST00000564578 PTRHD1Q6GMV3 140 aaKnown RBP12.24□□□□□ -0.45
KARS-204ENST00000564578 TRMT10CQ7L0Y3 403 aaKnown RBP12.24□□□□□ -0.45
KARS-204ENST00000564578 STRA8Q7Z7C7 330 aa12.24□□□□□ -0.45
KARS-204ENST00000564578 SLC26A11Q86WA9 606 aa12.24□□□□□ -0.45
KARS-204ENST00000564578 ZC3HC1Q86WB0 502 aaKnown RBP12.24□□□□□ -0.45
KARS-204ENST00000564578 GKN2Q86XP6 184 aa12.24□□□□□ -0.45
KARS-204ENST00000564578 NAGSQ8N159 534 aa12.24□□□□□ -0.45
KARS-204ENST00000564578 EID2Q8N6I1 236 aa12.24□□□□□ -0.45
KARS-204ENST00000564578 ACVR1CQ8NER5 493 aa12.24□□□□□ -0.45
KARS-204ENST00000564578 PATE1Q8WXA2 126 aa12.24□□□□□ -0.45
KARS-204ENST00000564578 DPEP2Q9H4A9 486 aa12.24□□□□□ -0.45
KARS-204ENST00000564578 ACSS3Q9H6R3 686 aa12.24□□□□□ -0.45
KARS-204ENST00000564578 PRDM8Q9NQV8 689 aa12.24□□□□□ -0.45
KARS-204ENST00000564578 GNPTGQ9UJJ9 305 aa12.24□□□□□ -0.45
KARS-204ENST00000564578 PCOLCE2Q9UKZ9 415 aa12.24□□□□□ -0.45
KARS-204ENST00000564578 WDR37Q9Y2I8 494 aa12.24□□□□□ -0.45
KARS-204ENST00000564578 SPTBN4Q9H254 2564 aa12.24□□□□□ -0.45
KARS-204ENST00000564578 LY6G6EA0A0G2JKS1 128 aa12.23□□□□□ -0.45
KARS-204ENST00000564578 KLHL33A6NCF5 533 aa12.23□□□□□ -0.45
KARS-204ENST00000564578 FLRT2O43155 660 aa12.23□□□□□ -0.45
KARS-204ENST00000564578 SIGLEC6O43699 453 aa12.23□□□□□ -0.45
KARS-204ENST00000564578 KCNJ13O60928 360 aa12.23□□□□□ -0.45
KARS-204ENST00000564578 FAM155BO75949 473 aa12.23□□□□□ -0.45
KARS-204ENST00000564578 TRIM16O95361 564 aa12.23□□□□□ -0.45
KARS-204ENST00000564578 FTH1P02794 183 aa12.23□□□□□ -0.45
KARS-204ENST00000564578 ANXA6P08133 673 aa12.23□□□□□ -0.45
KARS-204ENST00000564578 ITGB6P18564 788 aa12.23□□□□□ -0.45
KARS-204ENST00000564578 GRK6P43250 576 aa12.23□□□□□ -0.45
KARS-204ENST00000564578 SLC29A2Q14542 456 aa12.23□□□□□ -0.45
KARS-204ENST00000564578 SUZ12Q15022 739 aaKnown RBP12.23□□□□□ -0.45
KARS-204ENST00000564578 UAP1Q16222 522 aaPredicted RBP12.23□□□□□ -0.45
KARS-204ENST00000564578 C6orf132Q5T0Z8 1188 aa12.23□□□□□ -0.45
KARS-204ENST00000564578 RBM20Q5T481 1227 aaKnown RBP12.23□□□□□ -0.45
KARS-204ENST00000564578 OGFOD3Q6PK18 319 aa12.23□□□□□ -0.45
KARS-204ENST00000564578 PIP4P1Q86T03 277 aa12.23□□□□□ -0.45
KARS-204ENST00000564578 CFAP206Q8IYR0 622 aa12.23□□□□□ -0.45
KARS-204ENST00000564578 GABPB2Q8TAK5 448 aaPredicted RBP12.23□□□□□ -0.45
KARS-204ENST00000564578 UHMK1Q8TAS1 419 aaKnown RBP12.23□□□□□ -0.45
KARS-204ENST00000564578 FAM136AQ96C01 138 aa12.23□□□□□ -0.45
KARS-204ENST00000564578 NDNQ99608 321 aa12.23□□□□□ -0.45
KARS-204ENST00000564578 SLC30A3Q99726 388 aa12.23□□□□□ -0.45
KARS-204ENST00000564578 AARSD1Q9BTE6 412 aaKnown RBP12.23□□□□□ -0.45
KARS-204ENST00000564578 OSGEPL1Q9H4B0 414 aa12.23□□□□□ -0.45
KARS-204ENST00000564578 SCHIP1Q9P0W5 487 aaPredicted RBP12.23□□□□□ -0.45
KARS-204ENST00000564578 FAM8A1Q9UBU6 413 aa12.23□□□□□ -0.45
KARS-204ENST00000564578 CDYLQ9Y232 598 aa12.23□□□□□ -0.45
KARS-204ENST00000564578 U3KQA8 63 aa12.23□□□□□ -0.45
KARS-204ENST00000564578 SLC5A10A0PJK1 596 aa12.23□□□□□ -0.45
KARS-204ENST00000564578 NOBOXO60393 691 aa12.23□□□□□ -0.45
KARS-204ENST00000564578 MYF5P13349 255 aa12.23□□□□□ -0.45
KARS-204ENST00000564578 AOAHP28039 575 aa12.23□□□□□ -0.45
KARS-204ENST00000564578 PDHA2P29803 388 aa12.23□□□□□ -0.45
KARS-204ENST00000564578 PHBP35232 272 aa12.23□□□□□ -0.45
KARS-204ENST00000564578 CD151P48509 253 aa12.23□□□□□ -0.45
KARS-204ENST00000564578 CLCN7P51798 805 aa12.23□□□□□ -0.45
KARS-204ENST00000564578 PGGT1BP53609 377 aa12.23□□□□□ -0.45
KARS-204ENST00000564578 CDKN2DP55273 166 aa12.23□□□□□ -0.45
KARS-204ENST00000564578 IYDQ6PHW0 289 aa12.23□□□□□ -0.45
KARS-204ENST00000564578 ABRAXAS1Q6UWZ7 409 aa12.23□□□□□ -0.45
KARS-204ENST00000564578 C17orf82Q86X59 251 aaPredicted RBP12.23□□□□□ -0.45
KARS-204ENST00000564578 NAXDQ8IW45 347 aa12.23□□□□□ -0.45
KARS-204ENST00000564578 CTAGE3PQ8IX95 158 aa12.23□□□□□ -0.45
KARS-204ENST00000564578 PPM1NQ8N819 430 aa12.23□□□□□ -0.45
KARS-204ENST00000564578 GPATCH11Q8N954 259 aa12.23□□□□□ -0.45
KARS-204ENST00000564578 FAM181AQ8N9Y4 354 aa12.23□□□□□ -0.45
KARS-204ENST00000564578 GPR156Q8NFN8 814 aa12.23□□□□□ -0.45
KARS-204ENST00000564578 SPDYE1Q8NFV5 336 aaPredicted RBP12.23□□□□□ -0.45
KARS-204ENST00000564578 GIMAP7Q8NHV1 300 aa12.23□□□□□ -0.45
KARS-204ENST00000564578 BAHD1Q8TBE0 780 aaPredicted RBP12.23□□□□□ -0.45
KARS-204ENST00000564578 HM13Q8TCT9 377 aa12.23□□□□□ -0.45
KARS-204ENST00000564578 SETD7Q8WTS6 366 aaKnown RBP12.23□□□□□ -0.45
KARS-204ENST00000564578 CDKL2Q92772 493 aa12.23□□□□□ -0.45
KARS-204ENST00000564578 KCNJ9Q92806 393 aa12.23□□□□□ -0.45
KARS-204ENST00000564578 LATS2Q9NRM7 1088 aa12.23□□□□□ -0.45
KARS-204ENST00000564578 DOLKQ9UPQ8 538 aa12.23□□□□□ -0.45
KARS-204ENST00000564578 ASXL3Q9C0F0 2248 aa12.23□□□□□ -0.45
KARS-204ENST00000564578 CTIFO43310 598 aaKnown RBP12.22□□□□□ -0.45
KARS-204ENST00000564578 SNX2O60749 519 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms