RNA–Protein interactions for RNA: ENST00000563573.5

CDR2-203, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 4

Gene CDR2, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-203ENST00000563573 FSCBQ5H9T9 825 aa4.65□□□□□ -1.67
CDR2-203ENST00000563573 RNF187Q5TA31 235 aaPredicted RBP4.65□□□□□ -1.67
CDR2-203ENST00000563573 CXorf57Q6NSI4 855 aaKnown RBP4.65□□□□□ -1.67
CDR2-203ENST00000563573 PARM1Q6UWI2 310 aa4.65□□□□□ -1.67
CDR2-203ENST00000563573 VITQ6UXI7 678 aa4.65□□□□□ -1.67
CDR2-203ENST00000563573 LINC00523Q86TU6 105 aa4.65□□□□□ -1.67
CDR2-203ENST00000563573 HOOK3Q86VS8 718 aa4.65□□□□□ -1.67
CDR2-203ENST00000563573 VRK3Q8IV63 474 aa4.65□□□□□ -1.67
CDR2-203ENST00000563573 ZNF567Q8N184 647 aa4.65□□□□□ -1.67
CDR2-203ENST00000563573 TEX26Q8N6G2 289 aa4.65□□□□□ -1.67
CDR2-203ENST00000563573 NPWQ8N729 165 aa4.65□□□□□ -1.67
CDR2-203ENST00000563573 OR7D4Q8NG98 312 aa4.65□□□□□ -1.67
CDR2-203ENST00000563573 CCDC110Q8TBZ0 833 aa4.65□□□□□ -1.67
CDR2-203ENST00000563573 WFIKKN2Q8TEU8 576 aa4.65□□□□□ -1.67
CDR2-203ENST00000563573 UCMAQ8WVF2 138 aa4.65□□□□□ -1.67
CDR2-203ENST00000563573 SUSD6Q92537 303 aa4.65□□□□□ -1.67
CDR2-203ENST00000563573 MAML1Q92585 1016 aa4.65□□□□□ -1.67
CDR2-203ENST00000563573 ART4Q93070 314 aa4.65□□□□□ -1.67
CDR2-203ENST00000563573 PRICKLE1Q96MT3 831 aaPredicted RBP4.65□□□□□ -1.67
CDR2-203ENST00000563573 SPATA13Q96N96 652 aa4.65□□□□□ -1.67
CDR2-203ENST00000563573 AGAP3Q96P47 875 aa4.65□□□□□ -1.67
CDR2-203ENST00000563573 FMO2Q99518 471 aa4.65□□□□□ -1.67
CDR2-203ENST00000563573 IL12RB2Q99665 862 aa4.65□□□□□ -1.67
CDR2-203ENST00000563573 TRIM51Q9BSJ1 452 aa4.65□□□□□ -1.67
CDR2-203ENST00000563573 MLST8Q9BVC4 326 aa4.65□□□□□ -1.67
CDR2-203ENST00000563573 CINPQ9BW66 212 aaPredicted RBP4.65□□□□□ -1.67
CDR2-203ENST00000563573 PHF7Q9BWX1 381 aaPredicted RBP4.65□□□□□ -1.67
CDR2-203ENST00000563573 POLR1EQ9GZS1 481 aaKnown RBP4.65□□□□□ -1.67
CDR2-203ENST00000563573 EBF3Q9H4W6 596 aa4.65□□□□□ -1.67
CDR2-203ENST00000563573 ECT2Q9H8V3 914 aa4.65□□□□□ -1.67
CDR2-203ENST00000563573 GLOD4Q9HC38 313 aa4.65□□□□□ -1.67
CDR2-203ENST00000563573 ARFGAP3Q9NP61 516 aa4.65□□□□□ -1.67
CDR2-203ENST00000563573 NT5MQ9NPB1 228 aa4.65□□□□□ -1.67
CDR2-203ENST00000563573 ABCB8Q9NUT2 735 aa4.65□□□□□ -1.67
CDR2-203ENST00000563573 DNAJC17Q9NVM6 304 aaKnown RBP4.65□□□□□ -1.67
CDR2-203ENST00000563573 IGSF9Q9P2J2 1179 aa4.65□□□□□ -1.67
CDR2-203ENST00000563573 EPS15L1Q9UBC2 864 aa4.65□□□□□ -1.67
CDR2-203ENST00000563573 RSPH14Q9UHP6 348 aa4.65□□□□□ -1.67
CDR2-203ENST00000563573 ZNHIT2Q9UHR6 403 aa4.65□□□□□ -1.67
CDR2-203ENST00000563573 RAB21Q9UL25 225 aa4.65□□□□□ -1.67
CDR2-203ENST00000563573 NFU1Q9UMS0 254 aa4.65□□□□□ -1.67
CDR2-203ENST00000563573 PLA2G4CQ9UP65 541 aa4.65□□□□□ -1.67
CDR2-203ENST00000563573 NEU3Q9UQ49 428 aa4.65□□□□□ -1.67
CDR2-203ENST00000563573 USP15Q9Y4E8 981 aaPredicted RBP4.65□□□□□ -1.67
CDR2-203ENST00000563573 TTLL3Q9Y4R7 772 aa4.65□□□□□ -1.67
CDR2-203ENST00000563573 A0A0D9SEW6 157 aa4.64□□□□□ -1.67
CDR2-203ENST00000563573 PRSS38A1L453 326 aa4.64□□□□□ -1.67
CDR2-203ENST00000563573 MAGEB16A2A368 324 aa4.64□□□□□ -1.67
CDR2-203ENST00000563573 TBC1D3BA6NDS4 549 aa4.64□□□□□ -1.67
CDR2-203ENST00000563573 TMEM200CA6NKL6 621 aa4.64□□□□□ -1.67
CDR2-203ENST00000563573 B5MCH6 92 aa4.64□□□□□ -1.67
CDR2-203ENST00000563573 NEMP1O14524 444 aa4.64□□□□□ -1.67
CDR2-203ENST00000563573 HOXC11O43248 304 aaPredicted RBP4.64□□□□□ -1.67
CDR2-203ENST00000563573 SEC31AO94979 1220 aaKnown RBP4.64□□□□□ -1.67
CDR2-203ENST00000563573 METTL18O95568 372 aa4.64□□□□□ -1.67
CDR2-203ENST00000563573 PENKP01210 267 aaPredicted RBP4.64□□□□□ -1.67
CDR2-203ENST00000563573 GASTP01350 101 aa4.64□□□□□ -1.67
CDR2-203ENST00000563573 APODP05090 189 aa4.64□□□□□ -1.67
CDR2-203ENST00000563573 APRTP07741 180 aa4.64□□□□□ -1.67
CDR2-203ENST00000563573 SRPRAP08240 638 aaKnown RBP4.64□□□□□ -1.67
CDR2-203ENST00000563573 SERPINF2P08697 491 aa4.64□□□□□ -1.67
CDR2-203ENST00000563573 TPSB2P20231 275 aa4.64□□□□□ -1.67
CDR2-203ENST00000563573 FBLP22087 321 aaKnown RBP4.64□□□□□ -1.67
CDR2-203ENST00000563573 FCARP24071 287 aa4.64□□□□□ -1.67
CDR2-203ENST00000563573 IVDP26440 423 aa4.64□□□□□ -1.67
CDR2-203ENST00000563573 HOXD9P28356 352 aaPredicted RBP4.64□□□□□ -1.67
CDR2-203ENST00000563573 CD70P32970 193 aa4.64□□□□□ -1.67
CDR2-203ENST00000563573 CSKP41240 450 aa4.64□□□□□ -1.67
CDR2-203ENST00000563573 RECQLP46063 649 aaPredicted RBP4.64□□□□□ -1.67
CDR2-203ENST00000563573 AVPR1BP47901 424 aa4.64□□□□□ -1.67
CDR2-203ENST00000563573 NPY2RP49146 381 aa4.64□□□□□ -1.67
CDR2-203ENST00000563573 RHOAP61586 193 aa4.64□□□□□ -1.67
CDR2-203ENST00000563573 SNRPD1P62314 119 aaKnown RBP4.64□□□□□ -1.67
CDR2-203ENST00000563573 VSNL1P62760 191 aa4.64□□□□□ -1.67
CDR2-203ENST00000563573 BLOC1S1P78537 153 aa4.64□□□□□ -1.67
CDR2-203ENST00000563573 MGAT5Q09328 741 aa4.64□□□□□ -1.67
CDR2-203ENST00000563573 LMAN2Q12907 356 aa4.64□□□□□ -1.67
CDR2-203ENST00000563573 MPP3Q13368 585 aa4.64□□□□□ -1.67
CDR2-203ENST00000563573 SEMA5AQ13591 1074 aa4.64□□□□□ -1.67
CDR2-203ENST00000563573 LAMB3Q13751 1172 aa4.64□□□□□ -1.67
CDR2-203ENST00000563573 GRM3Q14832 879 aa4.64□□□□□ -1.67
CDR2-203ENST00000563573 TERF2Q15554 542 aa4.64□□□□□ -1.67
CDR2-203ENST00000563573 TPSAB1Q15661 275 aa4.64□□□□□ -1.67
CDR2-203ENST00000563573 AAK1Q2M2I8 961 aa4.64□□□□□ -1.67
CDR2-203ENST00000563573 PLEKHG6Q3KR16 790 aa4.64□□□□□ -1.67
CDR2-203ENST00000563573 LEXMQ3ZCV2 418 aa4.64□□□□□ -1.67
CDR2-203ENST00000563573 ACCSLQ4AC99 568 aa4.64□□□□□ -1.67
CDR2-203ENST00000563573 PITRM1Q5JRX3 1037 aa4.64□□□□□ -1.67
CDR2-203ENST00000563573 RNASEH2BQ5TBB1 312 aaKnown RBP4.64□□□□□ -1.67
CDR2-203ENST00000563573 HECTD2Q5U5R9 776 aa4.64□□□□□ -1.67
CDR2-203ENST00000563573 NAPEPLDQ6IQ20 393 aa4.64□□□□□ -1.67
CDR2-203ENST00000563573 HIBCHQ6NVY1 386 aaPredicted RBP4.64□□□□□ -1.67
CDR2-203ENST00000563573 ARMC6Q6NXE6 501 aa4.64□□□□□ -1.67
CDR2-203ENST00000563573 EMBQ6PCB8 327 aa4.64□□□□□ -1.67
CDR2-203ENST00000563573 CENPUQ71F23 418 aa4.64□□□□□ -1.67
CDR2-203ENST00000563573 Q7L0L9 218 aa4.64□□□□□ -1.67
CDR2-203ENST00000563573 GDF7Q7Z4P5 450 aa4.64□□□□□ -1.67
CDR2-203ENST00000563573 CCDC25Q86WR0 208 aa4.64□□□□□ -1.67
CDR2-203ENST00000563573 CXorf67Q86X51 503 aaPredicted RBP4.64□□□□□ -1.67
CDR2-203ENST00000563573 PLXDC1Q8IUK5 500 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms