RNA–Protein interactions for RNA: ENST00000563400.1

VPS35P1-201, Transcript of VPS35, retromer complex component pseudogene 1, humanhuman

BASIC

Gene VPS35P1, Length 1,518 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35P1-201ENST00000563400 MINDY3Q9H8M7 445 aa5.17□□□□□ -1.58
VPS35P1-201ENST00000563400 AKIRIN1Q9H9L7 192 aaPredicted RBP5.17□□□□□ -1.58
VPS35P1-201ENST00000563400 RPF1Q9H9Y2 349 aaKnown RBP5.17□□□□□ -1.58
VPS35P1-201ENST00000563400 VPS18Q9P253 973 aa5.17□□□□□ -1.58
VPS35P1-201ENST00000563400 KLHL14Q9P2G3 628 aa5.17□□□□□ -1.58
VPS35P1-201ENST00000563400 DNPEPQ9ULA0 475 aa5.17□□□□□ -1.58
VPS35P1-201ENST00000563400 KCNK6Q9Y257 313 aa5.17□□□□□ -1.58
VPS35P1-201ENST00000563400 PLEKHA6Q9Y2H5 1048 aa5.17□□□□□ -1.58
VPS35P1-201ENST00000563400 CHD4Q14839 1912 aa5.17□□□□□ -1.58
VPS35P1-201ENST00000563400 DUOX1Q9NRD9 1551 aa5.16□□□□□ -1.58
VPS35P1-201ENST00000563400 RFX7Q2KHR2 1363 aa5.16□□□□□ -1.58
VPS35P1-201ENST00000563400 LAMB2P55268 1798 aa5.16□□□□□ -1.58
VPS35P1-201ENST00000563400 A0A0B4J293 547 aa5.16□□□□□ -1.58
VPS35P1-201ENST00000563400 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.16□□□□□ -1.58
VPS35P1-201ENST00000563400 H3BQ06 376 aaPredicted RBP5.16□□□□□ -1.58
VPS35P1-201ENST00000563400 PPM1DO15297 605 aa5.16□□□□□ -1.58
VPS35P1-201ENST00000563400 HCRTR2O43614 444 aa5.16□□□□□ -1.58
VPS35P1-201ENST00000563400 VNN1O95497 513 aa5.16□□□□□ -1.58
VPS35P1-201ENST00000563400 CXCL14O95715 111 aa5.16□□□□□ -1.58
VPS35P1-201ENST00000563400 GH1P01241 217 aa5.16□□□□□ -1.58
VPS35P1-201ENST00000563400 EBLN1P0CF75 366 aa5.16□□□□□ -1.58
VPS35P1-201ENST00000563400 POU1F1P28069 291 aa5.16□□□□□ -1.58
VPS35P1-201ENST00000563400 NDUFV1P49821 464 aa5.16□□□□□ -1.58
VPS35P1-201ENST00000563400 TNFRSF17Q02223 184 aa5.16□□□□□ -1.58
VPS35P1-201ENST00000563400 CHRNEQ04844 493 aa5.16□□□□□ -1.58
VPS35P1-201ENST00000563400 SREBF2Q12772 1141 aa5.16□□□□□ -1.58
VPS35P1-201ENST00000563400 ALKBH1Q13686 389 aaKnown RBP5.16□□□□□ -1.58
VPS35P1-201ENST00000563400 GALNT3Q14435 633 aa5.16□□□□□ -1.58
VPS35P1-201ENST00000563400 SYCP1Q15431 976 aa5.16□□□□□ -1.58
VPS35P1-201ENST00000563400 USH1GQ495M9 461 aa5.16□□□□□ -1.58
VPS35P1-201ENST00000563400 RARS2Q5T160 578 aaKnown RBP5.16□□□□□ -1.58
VPS35P1-201ENST00000563400 CERCAMQ5T4B2 595 aa5.16□□□□□ -1.58
VPS35P1-201ENST00000563400 ARHGAP17Q68EM7 881 aa5.16□□□□□ -1.58
VPS35P1-201ENST00000563400 RGS7BPQ6MZT1 257 aaPredicted RBP5.16□□□□□ -1.58
VPS35P1-201ENST00000563400 MACC1Q6ZN28 852 aa5.16□□□□□ -1.58
VPS35P1-201ENST00000563400 TAS2R42Q7RTR8 314 aa5.16□□□□□ -1.58
VPS35P1-201ENST00000563400 GPAT4Q86UL3 456 aa5.16□□□□□ -1.58
VPS35P1-201ENST00000563400 TAX1BP1Q86VP1 789 aa5.16□□□□□ -1.58
VPS35P1-201ENST00000563400 ZNF573Q86YE8 665 aa5.16□□□□□ -1.58
VPS35P1-201ENST00000563400 P3H2Q8IVL5 708 aa5.16□□□□□ -1.58
VPS35P1-201ENST00000563400 PHC2Q8IXK0 858 aa5.16□□□□□ -1.58
VPS35P1-201ENST00000563400 SLC15A3Q8IY34 581 aa5.16□□□□□ -1.58
VPS35P1-201ENST00000563400 SCYL3Q8IZE3 742 aa5.16□□□□□ -1.58
VPS35P1-201ENST00000563400 ARL14Q8N4G2 192 aa5.16□□□□□ -1.58
VPS35P1-201ENST00000563400 ZNF321PQ8N8H1 164 aa5.16□□□□□ -1.58
VPS35P1-201ENST00000563400 ENDOVQ8N8Q3 282 aaKnown RBP5.16□□□□□ -1.58
VPS35P1-201ENST00000563400 CLEC1AQ8NC01 280 aa5.16□□□□□ -1.58
VPS35P1-201ENST00000563400 SETD9Q8NE22 299 aa5.16□□□□□ -1.58
VPS35P1-201ENST00000563400 PDZD8Q8NEN9 1154 aa5.16□□□□□ -1.58
VPS35P1-201ENST00000563400 TSPAN14Q8NG11 270 aa5.16□□□□□ -1.58
VPS35P1-201ENST00000563400 ELP5Q8TE02 316 aa5.16□□□□□ -1.58
VPS35P1-201ENST00000563400 HEXDCQ8WVB3 486 aa5.16□□□□□ -1.58
VPS35P1-201ENST00000563400 NACC2Q96BF6 587 aa5.16□□□□□ -1.58
VPS35P1-201ENST00000563400 NXNL1Q96CM4 212 aa5.16□□□□□ -1.58
VPS35P1-201ENST00000563400 RNF31Q96EP0 1072 aa5.16□□□□□ -1.58
VPS35P1-201ENST00000563400 SGF29Q96ES7 293 aa5.16□□□□□ -1.58
VPS35P1-201ENST00000563400 BSCL2Q96G97 398 aaPredicted RBP5.16□□□□□ -1.58
VPS35P1-201ENST00000563400 NSMCE2Q96MF7 247 aa5.16□□□□□ -1.58
VPS35P1-201ENST00000563400 TRIB1Q96RU8 372 aa5.16□□□□□ -1.58
VPS35P1-201ENST00000563400 NPAS1Q99742 590 aa5.16□□□□□ -1.58
VPS35P1-201ENST00000563400 DDX50Q9BQ39 737 aaKnown RBP5.16□□□□□ -1.58
VPS35P1-201ENST00000563400 IDI2Q9BXS1 227 aa5.16□□□□□ -1.58
VPS35P1-201ENST00000563400 GPR61Q9BZJ8 451 aa5.16□□□□□ -1.58
VPS35P1-201ENST00000563400 DEFB129Q9H1M3 183 aa5.16□□□□□ -1.58
VPS35P1-201ENST00000563400 TFB2MQ9H5Q4 396 aaKnown RBP5.16□□□□□ -1.58
VPS35P1-201ENST00000563400 NOL11Q9H8H0 719 aaKnown RBP5.16□□□□□ -1.58
VPS35P1-201ENST00000563400 ASAH2Q9NR71 780 aa5.16□□□□□ -1.58
VPS35P1-201ENST00000563400 GDAP2Q9NXN4 497 aa5.16□□□□□ -1.58
VPS35P1-201ENST00000563400 ARPP21Q9UBL0 812 aaPredicted RBP5.16□□□□□ -1.58
VPS35P1-201ENST00000563400 ATP6V1HQ9UI12 483 aa5.16□□□□□ -1.58
VPS35P1-201ENST00000563400 DBNLQ9UJU6 430 aaKnown RBP5.16□□□□□ -1.58
VPS35P1-201ENST00000563400 ABT1Q9ULW3 272 aaKnown RBP5.16□□□□□ -1.58
VPS35P1-201ENST00000563400 PLA2G2DQ9UNK4 145 aa5.16□□□□□ -1.58
VPS35P1-201ENST00000563400 WBP11Q9Y2W2 641 aaKnown RBP5.16□□□□□ -1.58
VPS35P1-201ENST00000563400 MRPL11Q9Y3B7 192 aaKnown RBP5.16□□□□□ -1.58
VPS35P1-201ENST00000563400 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.16□□□□□ -1.58
VPS35P1-201ENST00000563400 MROH7-TTC4A0A0A0MT08 1334 aa5.16□□□□□ -1.58
VPS35P1-201ENST00000563400 RAD50Q92878 1312 aa5.16□□□□□ -1.58
VPS35P1-201ENST00000563400 DLEC1Q9Y238 1755 aa5.15□□□□□ -1.58
VPS35P1-201ENST00000563400 KRTAP9-6A0A140TA67 174 aa5.15□□□□□ -1.58
VPS35P1-201ENST00000563400 A0A1W2PRX2 142 aa5.15□□□□□ -1.58
VPS35P1-201ENST00000563400 TARSL2A2RTX5 802 aaKnown RBP5.15□□□□□ -1.58
VPS35P1-201ENST00000563400 TRIM49BA6NDI0 452 aa5.15□□□□□ -1.58
VPS35P1-201ENST00000563400 C5orf52A6NGY3 159 aa5.15□□□□□ -1.58
VPS35P1-201ENST00000563400 FAM47DPA6NHR8 397 aa5.15□□□□□ -1.58
VPS35P1-201ENST00000563400 YDJCA8MPS7 323 aa5.15□□□□□ -1.58
VPS35P1-201ENST00000563400 MAGEB17A8MXT2 336 aa5.15□□□□□ -1.58
VPS35P1-201ENST00000563400 BUB1O43683 1085 aa5.15□□□□□ -1.58
VPS35P1-201ENST00000563400 CACNG3O60359 315 aa5.15□□□□□ -1.58
VPS35P1-201ENST00000563400 SLC25A12O75746 678 aa5.15□□□□□ -1.58
VPS35P1-201ENST00000563400 NPPAP01160 153 aa5.15□□□□□ -1.58
VPS35P1-201ENST00000563400 POMCP01189 267 aa5.15□□□□□ -1.58
VPS35P1-201ENST00000563400 LIPFP07098 398 aa5.15□□□□□ -1.58
VPS35P1-201ENST00000563400 C8AP07357 584 aa5.15□□□□□ -1.58
VPS35P1-201ENST00000563400 ASNSP08243 561 aa5.15□□□□□ -1.58
VPS35P1-201ENST00000563400 SBK2P0C263 348 aa5.15□□□□□ -1.58
VPS35P1-201ENST00000563400 TMEM225BP0DP42 221 aa5.15□□□□□ -1.58
VPS35P1-201ENST00000563400 THRBP10828 461 aa5.15□□□□□ -1.58
VPS35P1-201ENST00000563400 LBPP18428 481 aa5.15□□□□□ -1.58
VPS35P1-201ENST00000563400 CYP11B2P19099 503 aa5.15□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms