RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 STX16-NPEPL1H3BU86 382 aa17.74■□□□□ 0.43
COMMD4-208ENST00000563220 STX16O14662 325 aa17.74■□□□□ 0.43
COMMD4-208ENST00000563220 SNUPNO95149 360 aaKnown RBP17.74■□□□□ 0.43
COMMD4-208ENST00000563220 GLULP15104 373 aa17.74■□□□□ 0.43
COMMD4-208ENST00000563220 HNRNPH1P31943 449 aaKnown RBP17.74■□□□□ 0.43
COMMD4-208ENST00000563220 SLC9B1Q4ZJI4 515 aa17.74■□□□□ 0.43
COMMD4-208ENST00000563220 SLC44A4Q53GD3 710 aa17.74■□□□□ 0.43
COMMD4-208ENST00000563220 SH2D4BQ5SQS7 431 aa17.74■□□□□ 0.43
COMMD4-208ENST00000563220 FAM219BQ5XKK7 198 aa17.74■□□□□ 0.43
COMMD4-208ENST00000563220 SEL1L3Q68CR1 1132 aa17.74■□□□□ 0.43
COMMD4-208ENST00000563220 CLNKQ7Z7G1 428 aa17.74■□□□□ 0.43
COMMD4-208ENST00000563220 GBP7Q8N8V2 638 aaPredicted RBP17.74■□□□□ 0.43
COMMD4-208ENST00000563220 ESAMQ96AP7 390 aa17.74■□□□□ 0.43
COMMD4-208ENST00000563220 TRMOQ9BU70 441 aa17.74■□□□□ 0.43
COMMD4-208ENST00000563220 FAM126AQ9BYI3 521 aaPredicted RBP17.74■□□□□ 0.43
COMMD4-208ENST00000563220 NMUR2Q9GZQ4 415 aa17.74■□□□□ 0.43
COMMD4-208ENST00000563220 STN1Q9H668 368 aaKnown RBP17.74■□□□□ 0.43
COMMD4-208ENST00000563220 EML4Q9HC35 981 aaKnown RBP17.74■□□□□ 0.43
COMMD4-208ENST00000563220 ASB1Q9Y576 335 aa17.74■□□□□ 0.43
COMMD4-208ENST00000563220 TMEM202A6NGA9 273 aa17.73■□□□□ 0.43
COMMD4-208ENST00000563220 HDAC3O15379 428 aa17.73■□□□□ 0.43
COMMD4-208ENST00000563220 TM7SF2O76062 418 aa17.73■□□□□ 0.43
COMMD4-208ENST00000563220 RPS17P08708 135 aaKnown RBP17.73■□□□□ 0.43
COMMD4-208ENST00000563220 ALDH18A1P54886 795 aaKnown RBP17.73■□□□□ 0.43
COMMD4-208ENST00000563220 PHKG1Q16816 387 aa17.73■□□□□ 0.43
COMMD4-208ENST00000563220 PLEKHS1Q5SXH7 462 aa17.73■□□□□ 0.43
COMMD4-208ENST00000563220 FBXW10Q5XX13 1052 aa17.73■□□□□ 0.43
COMMD4-208ENST00000563220 TMEM220Q6QAJ8 160 aa17.73■□□□□ 0.43
COMMD4-208ENST00000563220 TRMT11Q7Z4G4 463 aaKnown RBP17.73■□□□□ 0.43
COMMD4-208ENST00000563220 ADGRG6Q86SQ4 1221 aa17.73■□□□□ 0.43
COMMD4-208ENST00000563220 GANCQ8TET4 914 aa17.73■□□□□ 0.43
COMMD4-208ENST00000563220 FAM3CQ92520 227 aa17.73■□□□□ 0.43
COMMD4-208ENST00000563220 ELMO1Q92556 727 aa17.73■□□□□ 0.43
COMMD4-208ENST00000563220 FAM131CQ96AQ9 280 aa17.73■□□□□ 0.43
COMMD4-208ENST00000563220 NUDT4Q9NZJ9 180 aa17.73■□□□□ 0.43
COMMD4-208ENST00000563220 SLC12A4Q9UP95 1085 aa17.73■□□□□ 0.43
COMMD4-208ENST00000563220 ZFR2Q9UPR6 939 aaKnown RBP17.73■□□□□ 0.43
COMMD4-208ENST00000563220 CDYLQ9Y232 598 aa17.73■□□□□ 0.43
COMMD4-208ENST00000563220 OARD1Q9Y530 152 aa17.73■□□□□ 0.43
COMMD4-208ENST00000563220 PIKFYVEQ9Y2I7 2098 aa17.73■□□□□ 0.43
COMMD4-208ENST00000563220 LRRK1Q38SD2 2015 aa17.73■□□□□ 0.43
COMMD4-208ENST00000563220 MYO10Q9HD67 2058 aa17.73■□□□□ 0.43
COMMD4-208ENST00000563220 FCHO1O14526 889 aa17.73■□□□□ 0.43
COMMD4-208ENST00000563220 FFAR2O15552 330 aa17.73■□□□□ 0.43
COMMD4-208ENST00000563220 NUAK1O60285 661 aa17.73■□□□□ 0.43
COMMD4-208ENST00000563220 SNX2O60749 519 aa17.73■□□□□ 0.43
COMMD4-208ENST00000563220 DIAPH2O60879 1101 aa17.73■□□□□ 0.43
COMMD4-208ENST00000563220 RASSF9O75901 435 aa17.73■□□□□ 0.43
COMMD4-208ENST00000563220 CDK14O94921 469 aa17.73■□□□□ 0.43
COMMD4-208ENST00000563220 FTH1P02794 183 aa17.73■□□□□ 0.43
COMMD4-208ENST00000563220 DNTTP04053 509 aa17.73■□□□□ 0.43
COMMD4-208ENST00000563220 JUNP05412 331 aaKnown RBP17.73■□□□□ 0.43
COMMD4-208ENST00000563220 ENO3P13929 434 aaPredicted RBP17.73■□□□□ 0.43
COMMD4-208ENST00000563220 SCTRP47872 440 aa17.73■□□□□ 0.43
COMMD4-208ENST00000563220 HK2P52789 917 aa17.73■□□□□ 0.43
COMMD4-208ENST00000563220 SH3BP2P78314 561 aa17.73■□□□□ 0.43
COMMD4-208ENST00000563220 CCINQ13939 588 aa17.73■□□□□ 0.43
COMMD4-208ENST00000563220 BOP1Q14137 746 aaKnown RBP17.73■□□□□ 0.43
COMMD4-208ENST00000563220 FGL2Q14314 439 aa17.73■□□□□ 0.43
COMMD4-208ENST00000563220 WSCD2Q2TBF2 565 aa17.73■□□□□ 0.43
COMMD4-208ENST00000563220 C18orf21Q32NC0 220 aaPredicted RBP17.73■□□□□ 0.43
COMMD4-208ENST00000563220 ANKS6Q68DC2 871 aa17.73■□□□□ 0.43
COMMD4-208ENST00000563220 FRA10AC1Q70Z53 315 aa17.73■□□□□ 0.43
COMMD4-208ENST00000563220 RPLP0P6Q8NHW5 317 aa17.73■□□□□ 0.43
COMMD4-208ENST00000563220 TRPC4APQ8TEL6 797 aa17.73■□□□□ 0.43
COMMD4-208ENST00000563220 GUCD1Q96NT3 240 aa17.73■□□□□ 0.43
COMMD4-208ENST00000563220 LENG8Q96PV6 779 aaPredicted RBP17.73■□□□□ 0.43
COMMD4-208ENST00000563220 C1QTNF3Q9BXJ4 246 aa17.73■□□□□ 0.43
COMMD4-208ENST00000563220 FBRSQ9HAH7 460 aa17.73■□□□□ 0.43
COMMD4-208ENST00000563220 EIF3FO00303 357 aaPredicted RBP17.72■□□□□ 0.43
COMMD4-208ENST00000563220 QSOX1O00391 747 aa17.72■□□□□ 0.43
COMMD4-208ENST00000563220 GPC4O75487 556 aa17.72■□□□□ 0.43
COMMD4-208ENST00000563220 DNAJC8O75937 253 aaPredicted RBP17.72■□□□□ 0.43
COMMD4-208ENST00000563220 PRLHRP49683 370 aa17.72■□□□□ 0.43
COMMD4-208ENST00000563220 CLCQ05315 142 aa17.72■□□□□ 0.43
COMMD4-208ENST00000563220 LEXMQ3ZCV2 418 aa17.72■□□□□ 0.43
COMMD4-208ENST00000563220 PNCKQ6P2M8 343 aa17.72■□□□□ 0.43
COMMD4-208ENST00000563220 TMEM92Q6UXU6 159 aa17.72■□□□□ 0.43
COMMD4-208ENST00000563220 OR14C36Q8NHC7 312 aa17.72■□□□□ 0.43
COMMD4-208ENST00000563220 PPP1R36Q96LQ0 422 aa17.72■□□□□ 0.43
COMMD4-208ENST00000563220 NUF2Q9BZD4 464 aa17.72■□□□□ 0.43
COMMD4-208ENST00000563220 OR2AG1Q9H205 316 aa17.72■□□□□ 0.43
COMMD4-208ENST00000563220 TRIM39Q9HCM9 518 aa17.72■□□□□ 0.43
COMMD4-208ENST00000563220 SLC2A4RGQ9NR83 387 aa17.72■□□□□ 0.43
COMMD4-208ENST00000563220 VTI1BQ9UEU0 232 aa17.72■□□□□ 0.43
COMMD4-208ENST00000563220 TMCO1Q9UM00 188 aa17.72■□□□□ 0.43
COMMD4-208ENST00000563220 APOBEC2Q9Y235 224 aaKnown RBP17.72■□□□□ 0.43
COMMD4-208ENST00000563220 SLCO1B7G3V0H7 640 aa17.71■□□□□ 0.43
COMMD4-208ENST00000563220 KPNA5O15131 536 aa17.71■□□□□ 0.43
COMMD4-208ENST00000563220 RAD51BO15315 384 aa17.71■□□□□ 0.43
COMMD4-208ENST00000563220 LILRB5O75023 590 aa17.71■□□□□ 0.43
COMMD4-208ENST00000563220 GUCA1CO95843 209 aa17.71■□□□□ 0.43
COMMD4-208ENST00000563220 T-ENOLP0DO92 83 aa17.71■□□□□ 0.43
COMMD4-208ENST00000563220 SRFP11831 508 aa17.71■□□□□ 0.43
COMMD4-208ENST00000563220 FOSL2P15408 326 aa17.71■□□□□ 0.43
COMMD4-208ENST00000563220 TDGQ13569 410 aa17.71■□□□□ 0.43
COMMD4-208ENST00000563220 PTCRAQ6ISU1 281 aaPredicted RBP17.71■□□□□ 0.43
COMMD4-208ENST00000563220 LILRA3Q8N6C8 439 aaPredicted RBP17.71■□□□□ 0.43
COMMD4-208ENST00000563220 OR52B2Q96RD2 323 aa17.71■□□□□ 0.43
COMMD4-208ENST00000563220 CCM2Q9BSQ5 444 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms