RNA–Protein interactions for RNA: ENST00000561673.1

CLK3-205, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 639 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-205ENST00000561673 RSC1A1Q92681 617 aa10.08□□□□□ -0.8
CLK3-205ENST00000561673 ZDHHC12Q96GR4 267 aa10.08□□□□□ -0.8
CLK3-205ENST00000561673 ZNF514Q96K75 400 aaPredicted RBP10.08□□□□□ -0.8
CLK3-205ENST00000561673 PPP1R2P1Q96PQ5 205 aa10.08□□□□□ -0.8
CLK3-205ENST00000561673 SLC12A9Q9BXP2 914 aa10.08□□□□□ -0.8
CLK3-205ENST00000561673 ZNF768Q9H5H4 540 aaKnown RBP10.08□□□□□ -0.8
CLK3-205ENST00000561673 FAM96AQ9H5X1 160 aa10.08□□□□□ -0.8
CLK3-205ENST00000561673 ARNT2Q9HBZ2 717 aa10.08□□□□□ -0.8
CLK3-205ENST00000561673 SIDT1Q9NXL6 827 aaKnown RBP10.08□□□□□ -0.8
CLK3-205ENST00000561673 IMPACTQ9P2X3 320 aa10.08□□□□□ -0.8
CLK3-205ENST00000561673 R3HDM2Q9Y2K5 976 aaKnown RBP10.08□□□□□ -0.8
CLK3-205ENST00000561673 ZNF462Q96JM2 2506 aa10.08□□□□□ -0.8
CLK3-205ENST00000561673 SDK2Q58EX2 2172 aa10.07□□□□□ -0.8
CLK3-205ENST00000561673 GOLGA6L9A6NEM1 432 aa10.07□□□□□ -0.8
CLK3-205ENST00000561673 MGAT4DA6NG13 374 aa10.07□□□□□ -0.8
CLK3-205ENST00000561673 AGAP14A8MT82 685 aa10.07□□□□□ -0.8
CLK3-205ENST00000561673 MIF4GDA9UHW6 222 aaKnown RBP10.07□□□□□ -0.8
CLK3-205ENST00000561673 B8ZZF3 427 aa10.07□□□□□ -0.8
CLK3-205ENST00000561673 CCL22O00626 93 aa10.07□□□□□ -0.8
CLK3-205ENST00000561673 LDB2O43679 373 aa10.07□□□□□ -0.8
CLK3-205ENST00000561673 SGTAO43765 313 aa10.07□□□□□ -0.8
CLK3-205ENST00000561673 RASSF9O75901 435 aa10.07□□□□□ -0.8
CLK3-205ENST00000561673 STK17BO94768 372 aa10.07□□□□□ -0.8
CLK3-205ENST00000561673 METTL18O95568 372 aa10.07□□□□□ -0.8
CLK3-205ENST00000561673 PTMAP06454 111 aaKnown RBP10.07□□□□□ -0.8
CLK3-205ENST00000561673 FAM87AP0C7U9 286 aa10.07□□□□□ -0.8
CLK3-205ENST00000561673 TPH1P17752 444 aa10.07□□□□□ -0.8
CLK3-205ENST00000561673 MAP4P27816 1152 aaKnown RBP10.07□□□□□ -0.8
CLK3-205ENST00000561673 CDC25BP30305 580 aa10.07□□□□□ -0.8
CLK3-205ENST00000561673 ZNF140P52738 457 aaPredicted RBP10.07□□□□□ -0.8
CLK3-205ENST00000561673 GDF10P55107 478 aa10.07□□□□□ -0.8
CLK3-205ENST00000561673 SH3BP2P78314 561 aa10.07□□□□□ -0.8
CLK3-205ENST00000561673 PDE1BQ01064 536 aa10.07□□□□□ -0.8
CLK3-205ENST00000561673 FOXM1Q08050 763 aa10.07□□□□□ -0.8
CLK3-205ENST00000561673 PARP6Q2NL67 630 aa10.07□□□□□ -0.8
CLK3-205ENST00000561673 CACHD1Q5VU97 1274 aa10.07□□□□□ -0.8
CLK3-205ENST00000561673 KCTD11Q693B1 232 aa10.07□□□□□ -0.8
CLK3-205ENST00000561673 IRGCQ6NXR0 463 aa10.07□□□□□ -0.8
CLK3-205ENST00000561673 XKR5Q6UX68 686 aa10.07□□□□□ -0.8
CLK3-205ENST00000561673 ARHGEF18Q6ZSZ5 1173 aa10.07□□□□□ -0.8
CLK3-205ENST00000561673 FAM92BQ6ZTR7 304 aa10.07□□□□□ -0.8
CLK3-205ENST00000561673 UNC5BQ8IZJ1 945 aa10.07□□□□□ -0.8
CLK3-205ENST00000561673 TXLNBQ8N3L3 684 aa10.07□□□□□ -0.8
CLK3-205ENST00000561673 TTC13Q8NBP0 860 aa10.07□□□□□ -0.8
CLK3-205ENST00000561673 GPR150Q8NGU9 434 aa10.07□□□□□ -0.8
CLK3-205ENST00000561673 OR2L2Q8NH16 312 aa10.07□□□□□ -0.8
CLK3-205ENST00000561673 HES6Q96HZ4 224 aa10.07□□□□□ -0.8
CLK3-205ENST00000561673 INSM2Q96T92 566 aaPredicted RBP10.07□□□□□ -0.8
CLK3-205ENST00000561673 ARHGAP9Q9BRR9 750 aa10.07□□□□□ -0.8
CLK3-205ENST00000561673 TMEM121Q9BTD3 319 aa10.07□□□□□ -0.8
CLK3-205ENST00000561673 RAB33BQ9H082 229 aa10.07□□□□□ -0.8
CLK3-205ENST00000561673 EPHA6Q9UF33 1036 aa10.07□□□□□ -0.8
CLK3-205ENST00000561673 FEZ2Q9UHY8 353 aaPredicted RBP10.07□□□□□ -0.8
CLK3-205ENST00000561673 TMEM184BQ9Y519 407 aaPredicted RBP10.07□□□□□ -0.8
CLK3-205ENST00000561673 CFAP20Q9Y6A4 193 aaKnown RBP10.07□□□□□ -0.8
CLK3-205ENST00000561673 IGHV5-51A0A0C4DH38 117 aa10.06□□□□□ -0.8
CLK3-205ENST00000561673 LOC101059948A0A1B0GTJ6 334 aa10.06□□□□□ -0.8
CLK3-205ENST00000561673 ZNF189O75820 626 aaPredicted RBP10.06□□□□□ -0.8
CLK3-205ENST00000561673 DLGAP3O95886 979 aa10.06□□□□□ -0.8
CLK3-205ENST00000561673 MTHFD1P11586 935 aaKnown RBP10.06□□□□□ -0.8
CLK3-205ENST00000561673 ATP1B2P14415 290 aaPredicted RBP10.06□□□□□ -0.8
CLK3-205ENST00000561673 HADHAP40939 763 aa10.06□□□□□ -0.8
CLK3-205ENST00000561673 CDKN1CP49918 316 aaPredicted RBP10.06□□□□□ -0.8
CLK3-205ENST00000561673 PPP1CAP62136 330 aa10.06□□□□□ -0.8
CLK3-205ENST00000561673 ABHD18Q0P651 414 aa10.06□□□□□ -0.8
CLK3-205ENST00000561673 IL11RAQ14626 422 aa10.06□□□□□ -0.8
CLK3-205ENST00000561673 BCL7AQ4VC05 210 aa10.06□□□□□ -0.8
CLK3-205ENST00000561673 MICALCLQ6ZW33 695 aa10.06□□□□□ -0.8
CLK3-205ENST00000561673 PRSS42Q7Z5A4 293 aa10.06□□□□□ -0.8
CLK3-205ENST00000561673 SNX20Q7Z614 316 aa10.06□□□□□ -0.8
CLK3-205ENST00000561673 CFAP206Q8IYR0 622 aa10.06□□□□□ -0.8
CLK3-205ENST00000561673 NXPE1Q8N323 547 aa10.06□□□□□ -0.8
CLK3-205ENST00000561673 LILRA3Q8N6C8 439 aaPredicted RBP10.06□□□□□ -0.8
CLK3-205ENST00000561673 SLC35B2Q8TB61 432 aa10.06□□□□□ -0.8
CLK3-205ENST00000561673 KLHL6Q8WZ60 621 aa10.06□□□□□ -0.8
CLK3-205ENST00000561673 RNF31Q96EP0 1072 aa10.06□□□□□ -0.8
CLK3-205ENST00000561673 DCUN1D1Q96GG9 259 aa10.06□□□□□ -0.8
CLK3-205ENST00000561673 DNAJC1Q96KC8 554 aaKnown RBP10.06□□□□□ -0.8
CLK3-205ENST00000561673 LINC00615Q96LM1 132 aaPredicted RBP10.06□□□□□ -0.8
CLK3-205ENST00000561673 OR6C1Q96RD1 312 aa10.06□□□□□ -0.8
CLK3-205ENST00000561673 C19orf43Q9BQ61 176 aa10.06□□□□□ -0.8
CLK3-205ENST00000561673 WWP1Q9H0M0 922 aa10.06□□□□□ -0.8
CLK3-205ENST00000561673 IMP3Q9NV31 184 aaKnown RBP10.06□□□□□ -0.8
CLK3-205ENST00000561673 PIH1D1Q9NWS0 290 aaKnown RBP10.06□□□□□ -0.8
CLK3-205ENST00000561673 SEMA5BQ9P283 1151 aa10.06□□□□□ -0.8
CLK3-205ENST00000561673 FAM8A1Q9UBU6 413 aa10.06□□□□□ -0.8
CLK3-205ENST00000561673 CRLS1Q9UJA2 301 aa10.06□□□□□ -0.8
CLK3-205ENST00000561673 ACSL5Q9ULC5 683 aa10.06□□□□□ -0.8
CLK3-205ENST00000561673 CAPN6Q9Y6Q1 641 aa10.06□□□□□ -0.8
CLK3-205ENST00000561673 KLHL33A6NCF5 533 aa10.05□□□□□ -0.8
CLK3-205ENST00000561673 ZNF891A8MT65 544 aaPredicted RBP10.05□□□□□ -0.8
CLK3-205ENST00000561673 NKX2-8O15522 239 aa10.05□□□□□ -0.8
CLK3-205ENST00000561673 POLBP06746 335 aa10.05□□□□□ -0.8
CLK3-205ENST00000561673 PRSS56P0CW18 603 aa10.05□□□□□ -0.8
CLK3-205ENST00000561673 RALBP11234 206 aa10.05□□□□□ -0.8
CLK3-205ENST00000561673 ZNF28P17035 718 aa10.05□□□□□ -0.8
CLK3-205ENST00000561673 ITGB6P18564 788 aa10.05□□□□□ -0.8
CLK3-205ENST00000561673 NELFEP18615 380 aaKnown RBP10.05□□□□□ -0.8
CLK3-205ENST00000561673 ITGALP20701 1170 aa10.05□□□□□ -0.8
CLK3-205ENST00000561673 MC4RP32245 332 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms