RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 DENND1BQ6P3S1 775 aa5.2□□□□□ -1.58
HERC1-213ENST00000561359 MRGPREQ86SM8 312 aa5.2□□□□□ -1.58
HERC1-213ENST00000561359 PHLDB2Q86SQ0 1253 aa5.2□□□□□ -1.58
HERC1-213ENST00000561359 TMEM110Q86TL2 294 aa5.2□□□□□ -1.58
HERC1-213ENST00000561359 ZSWIM9Q86XI8 627 aa5.2□□□□□ -1.58
HERC1-213ENST00000561359 CAMK1DQ8IU85 385 aa5.2□□□□□ -1.58
HERC1-213ENST00000561359 WFDC3Q8IUB2 231 aa5.2□□□□□ -1.58
HERC1-213ENST00000561359 MFSD4AQ8N468 514 aa5.2□□□□□ -1.58
HERC1-213ENST00000561359 TTC30BQ8N4P2 665 aa5.2□□□□□ -1.58
HERC1-213ENST00000561359 UBR7Q8N806 425 aa5.2□□□□□ -1.58
HERC1-213ENST00000561359 AVL9Q8NBF6 648 aa5.2□□□□□ -1.58
HERC1-213ENST00000561359 KIAA0895Q8NCT3 520 aa5.2□□□□□ -1.58
HERC1-213ENST00000561359 FNIP1Q8TF40 1166 aa5.2□□□□□ -1.58
HERC1-213ENST00000561359 KLHL6Q8WZ60 621 aa5.2□□□□□ -1.58
HERC1-213ENST00000561359 NR4A3Q92570 626 aa5.2□□□□□ -1.58
HERC1-213ENST00000561359 ZDHHC12Q96GR4 267 aa5.2□□□□□ -1.58
HERC1-213ENST00000561359 C18orf12Q96KH6 178 aa5.2□□□□□ -1.58
HERC1-213ENST00000561359 C1orf74Q96LT6 269 aa5.2□□□□□ -1.58
HERC1-213ENST00000561359 ZNF641Q96N77 438 aaPredicted RBP5.2□□□□□ -1.58
HERC1-213ENST00000561359 IP6K3Q96PC2 410 aa5.2□□□□□ -1.58
HERC1-213ENST00000561359 DPH2Q9BQC3 489 aaPredicted RBP5.2□□□□□ -1.58
HERC1-213ENST00000561359 ZNF559Q9BR84 538 aa5.2□□□□□ -1.58
HERC1-213ENST00000561359 HERPUD2Q9BSE4 406 aa5.2□□□□□ -1.58
HERC1-213ENST00000561359 TMEM121Q9BTD3 319 aa5.2□□□□□ -1.58
HERC1-213ENST00000561359 ENKD1Q9H0I2 346 aa5.2□□□□□ -1.58
HERC1-213ENST00000561359 PRDM7Q9NQW5 492 aa5.2□□□□□ -1.58
HERC1-213ENST00000561359 MBNL3Q9NUK0 354 aaKnown RBP5.2□□□□□ -1.58
HERC1-213ENST00000561359 EXOC1Q9NV70 894 aa5.2□□□□□ -1.58
HERC1-213ENST00000561359 OGFRQ9NZT2 677 aa5.2□□□□□ -1.58
HERC1-213ENST00000561359 TNFRSF10DQ9UBN6 386 aa5.2□□□□□ -1.58
HERC1-213ENST00000561359 ZNF212Q9UDV6 495 aa5.2□□□□□ -1.58
HERC1-213ENST00000561359 TBC1D29Q9UFV1 150 aa5.2□□□□□ -1.58
HERC1-213ENST00000561359 DNAI1Q9UI46 699 aa5.2□□□□□ -1.58
HERC1-213ENST00000561359 ADAMTS6Q9UKP5 1117 aa5.2□□□□□ -1.58
HERC1-213ENST00000561359 SLC30A1Q9Y6M5 507 aa5.2□□□□□ -1.58
HERC1-213ENST00000561359 ANKRD36A6QL64 1941 aa5.19□□□□□ -1.58
HERC1-213ENST00000561359 IGHV5-51A0A0C4DH38 117 aa5.19□□□□□ -1.58
HERC1-213ENST00000561359 KIR2DS5A0A0G2JLQ3 304 aa5.19□□□□□ -1.58
HERC1-213ENST00000561359 A0A0G2JNG1 304 aa5.19□□□□□ -1.58
HERC1-213ENST00000561359 TSPAN11A1L157 253 aa5.19□□□□□ -1.58
HERC1-213ENST00000561359 CCDC78A2IDD5 438 aa5.19□□□□□ -1.58
HERC1-213ENST00000561359 C9J4A7 227 aa5.19□□□□□ -1.58
HERC1-213ENST00000561359 KIR2DS3K7RE56 304 aa5.19□□□□□ -1.58
HERC1-213ENST00000561359 LDB2O43679 373 aa5.19□□□□□ -1.58
HERC1-213ENST00000561359 KDELR3O43731 214 aa5.19□□□□□ -1.58
HERC1-213ENST00000561359 RAMP2O60895 175 aa5.19□□□□□ -1.58
HERC1-213ENST00000561359 VIPP01282 170 aa5.19□□□□□ -1.58
HERC1-213ENST00000561359 HEXAP06865 529 aa5.19□□□□□ -1.58
HERC1-213ENST00000561359 EBLN1P0CF75 366 aa5.19□□□□□ -1.58
HERC1-213ENST00000561359 ST13P50502 369 aaKnown RBP5.19□□□□□ -1.58
HERC1-213ENST00000561359 TDGF1P3P51864 188 aa5.19□□□□□ -1.58
HERC1-213ENST00000561359 DGKQP52824 942 aa5.19□□□□□ -1.58
HERC1-213ENST00000561359 YBX1P67809 324 aaKnown RBP5.19□□□□□ -1.58
HERC1-213ENST00000561359 DEUP1Q05D60 604 aa5.19□□□□□ -1.58
HERC1-213ENST00000561359 PDCLQ13371 301 aa5.19□□□□□ -1.58
HERC1-213ENST00000561359 CUL4BQ13620 913 aa5.19□□□□□ -1.58
HERC1-213ENST00000561359 KIR2DS5Q14953 304 aa5.19□□□□□ -1.58
HERC1-213ENST00000561359 LONRF1Q17RB8 773 aa5.19□□□□□ -1.58
HERC1-213ENST00000561359 CBWD6Q4V339 395 aa5.19□□□□□ -1.58
HERC1-213ENST00000561359 DCAF17Q5H9S7 520 aaPredicted RBP5.19□□□□□ -1.58
HERC1-213ENST00000561359 CBWD3Q5JTY5 395 aa5.19□□□□□ -1.58
HERC1-213ENST00000561359 CBWD5Q5RIA9 395 aa5.19□□□□□ -1.58
HERC1-213ENST00000561359 PLEKHS1Q5SXH7 462 aa5.19□□□□□ -1.58
HERC1-213ENST00000561359 ACBD5Q5T8D3 534 aaPredicted RBP5.19□□□□□ -1.58
HERC1-213ENST00000561359 IRAK1BP1Q5VVH5 260 aa5.19□□□□□ -1.58
HERC1-213ENST00000561359 AFMIDQ63HM1 303 aa5.19□□□□□ -1.58
HERC1-213ENST00000561359 SPOCD1Q6ZMY3 1216 aa5.19□□□□□ -1.58
HERC1-213ENST00000561359 TMEM26Q6ZUK4 368 aa5.19□□□□□ -1.58
HERC1-213ENST00000561359 DPPA4Q7L190 304 aa5.19□□□□□ -1.58
HERC1-213ENST00000561359 CHST15Q7LFX5 561 aaPredicted RBP5.19□□□□□ -1.58
HERC1-213ENST00000561359 TRIM74Q86UV6 250 aa5.19□□□□□ -1.58
HERC1-213ENST00000561359 DNAAF5Q86Y56 855 aa5.19□□□□□ -1.58
HERC1-213ENST00000561359 TRIM48Q8IWZ4 208 aa5.19□□□□□ -1.58
HERC1-213ENST00000561359 DSELQ8IZU8 1212 aa5.19□□□□□ -1.58
HERC1-213ENST00000561359 PPM1KQ8N3J5 372 aa5.19□□□□□ -1.58
HERC1-213ENST00000561359 LZTR1Q8N653 840 aa5.19□□□□□ -1.58
HERC1-213ENST00000561359 SLC38A9Q8NBW4 561 aa5.19□□□□□ -1.58
HERC1-213ENST00000561359 CPLX3Q8WVH0 158 aa5.19□□□□□ -1.58
HERC1-213ENST00000561359 CLIP3Q96DZ5 547 aa5.19□□□□□ -1.58
HERC1-213ENST00000561359 INTS4Q96HW7 963 aaKnown RBP5.19□□□□□ -1.58
HERC1-213ENST00000561359 ZNF514Q96K75 400 aaPredicted RBP5.19□□□□□ -1.58
HERC1-213ENST00000561359 COQ10AQ96MF6 247 aa5.19□□□□□ -1.58
HERC1-213ENST00000561359 MAGEH1Q9H213 219 aa5.19□□□□□ -1.58
HERC1-213ENST00000561359 MAGEF1Q9HAY2 307 aa5.19□□□□□ -1.58
HERC1-213ENST00000561359 KCND1Q9NSA2 647 aa5.19□□□□□ -1.58
HERC1-213ENST00000561359 ASNSD1Q9NWL6 643 aa5.19□□□□□ -1.58
HERC1-213ENST00000561359 KCTD5Q9NXV2 234 aa5.19□□□□□ -1.58
HERC1-213ENST00000561359 TRAF3IP3Q9Y228 551 aa5.19□□□□□ -1.58
HERC1-213ENST00000561359 KCNK6Q9Y257 313 aa5.19□□□□□ -1.58
HERC1-213ENST00000561359 PADI2Q9Y2J8 665 aa5.19□□□□□ -1.58
HERC1-213ENST00000561359 PRKAB1Q9Y478 270 aa5.19□□□□□ -1.58
HERC1-213ENST00000561359 OR5K4A6NMS3 321 aa5.18□□□□□ -1.58
HERC1-213ENST00000561359 FAM171A2A8MVW0 826 aa5.18□□□□□ -1.58
HERC1-213ENST00000561359 FOXO6A8MYZ6 492 aa5.18□□□□□ -1.58
HERC1-213ENST00000561359 H3BS24 57 aa5.18□□□□□ -1.58
HERC1-213ENST00000561359 MED7O43513 233 aa5.18□□□□□ -1.58
HERC1-213ENST00000561359 SLC19A2O60779 497 aa5.18□□□□□ -1.58
HERC1-213ENST00000561359 DAB1O75553 588 aa5.18□□□□□ -1.58
HERC1-213ENST00000561359 LETM1O95202 739 aaPredicted RBP5.18□□□□□ -1.58
HERC1-213ENST00000561359 ZWINTO95229 277 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms