RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 NXPE1Q8N323 547 aa16.85■□□□□ 0.29
CDC42BPB-208ENST00000561271 ZNF843Q8N446 348 aa16.85■□□□□ 0.29
CDC42BPB-208ENST00000561271 RNF10Q8N5U6 811 aaKnown RBP16.85■□□□□ 0.29
CDC42BPB-208ENST00000561271 IL22RA1Q8N6P7 574 aa16.85■□□□□ 0.29
CDC42BPB-208ENST00000561271 LRRC45Q96CN5 670 aa16.85■□□□□ 0.29
CDC42BPB-208ENST00000561271 ZNF514Q96K75 400 aaPredicted RBP16.85■□□□□ 0.29
CDC42BPB-208ENST00000561271 TEFMQ96QE5 360 aaKnown RBP16.85■□□□□ 0.29
CDC42BPB-208ENST00000561271 TSGA10Q9BZW7 698 aa16.85■□□□□ 0.29
CDC42BPB-208ENST00000561271 WWP1Q9H0M0 922 aa16.85■□□□□ 0.29
CDC42BPB-208ENST00000561271 LRRC40Q9H9A6 602 aa16.85■□□□□ 0.29
CDC42BPB-208ENST00000561271 ARNT2Q9HBZ2 717 aa16.85■□□□□ 0.29
CDC42BPB-208ENST00000561271 IMP3Q9NV31 184 aaKnown RBP16.85■□□□□ 0.29
CDC42BPB-208ENST00000561271 FEZ2Q9UHY8 353 aaPredicted RBP16.85■□□□□ 0.29
CDC42BPB-208ENST00000561271 SEC16AO15027 2179 aa16.84■□□□□ 0.29
CDC42BPB-208ENST00000561271 SGTAO43765 313 aa16.84■□□□□ 0.29
CDC42BPB-208ENST00000561271 RAD1O60671 282 aa16.84■□□□□ 0.29
CDC42BPB-208ENST00000561271 RASSF9O75901 435 aa16.84■□□□□ 0.29
CDC42BPB-208ENST00000561271 MTHFD1P11586 935 aaKnown RBP16.84■□□□□ 0.29
CDC42BPB-208ENST00000561271 TPH1P17752 444 aa16.84■□□□□ 0.29
CDC42BPB-208ENST00000561271 MC4RP32245 332 aa16.84■□□□□ 0.29
CDC42BPB-208ENST00000561271 GSDMDP57764 484 aa16.84■□□□□ 0.29
CDC42BPB-208ENST00000561271 CYP4F2P78329 520 aa16.84■□□□□ 0.29
CDC42BPB-208ENST00000561271 C19orf57Q0VDD7 668 aa16.84■□□□□ 0.29
CDC42BPB-208ENST00000561271 POU6F1Q14863 301 aa16.84■□□□□ 0.29
CDC42BPB-208ENST00000561271 BCL7AQ4VC05 210 aa16.84■□□□□ 0.29
CDC42BPB-208ENST00000561271 IRGCQ6NXR0 463 aa16.84■□□□□ 0.29
CDC42BPB-208ENST00000561271 XKR5Q6UX68 686 aa16.84■□□□□ 0.29
CDC42BPB-208ENST00000561271 CEACAM20Q6UY09 585 aa16.84■□□□□ 0.29
CDC42BPB-208ENST00000561271 FAM92BQ6ZTR7 304 aa16.84■□□□□ 0.29
CDC42BPB-208ENST00000561271 RBM12BQ8IXT5 1001 aaKnown RBP16.84■□□□□ 0.29
CDC42BPB-208ENST00000561271 CACNA2D3Q8IZS8 1091 aa16.84■□□□□ 0.29
CDC42BPB-208ENST00000561271 ULK4Q96C45 1275 aa16.84■□□□□ 0.29
CDC42BPB-208ENST00000561271 WBP1Q96G27 269 aa16.84■□□□□ 0.29
CDC42BPB-208ENST00000561271 DNMT3AQ9Y6K1 912 aaPredicted RBP16.84■□□□□ 0.29
CDC42BPB-208ENST00000561271 CCDC78A2IDD5 438 aa16.83■□□□□ 0.28
CDC42BPB-208ENST00000561271 MGAT4DA6NG13 374 aa16.83■□□□□ 0.28
CDC42BPB-208ENST00000561271 AGAP14A8MT82 685 aa16.83■□□□□ 0.28
CDC42BPB-208ENST00000561271 KRT86O43790 486 aa16.83■□□□□ 0.28
CDC42BPB-208ENST00000561271 KIF1CO43896 1103 aaKnown RBP16.83■□□□□ 0.28
CDC42BPB-208ENST00000561271 AP2A1O95782 977 aa16.83■□□□□ 0.28
CDC42BPB-208ENST00000561271 PRSS56P0CW18 603 aa16.83■□□□□ 0.28
CDC42BPB-208ENST00000561271 LIFP15018 202 aa16.83■□□□□ 0.28
CDC42BPB-208ENST00000561271 HADHAP40939 763 aa16.83■□□□□ 0.28
CDC42BPB-208ENST00000561271 CDKN1CP49918 316 aaPredicted RBP16.83■□□□□ 0.28
CDC42BPB-208ENST00000561271 SH3BP2P78314 561 aa16.83■□□□□ 0.28
CDC42BPB-208ENST00000561271 FOXM1Q08050 763 aa16.83■□□□□ 0.28
CDC42BPB-208ENST00000561271 PLCL1Q15111 1095 aa16.83■□□□□ 0.28
CDC42BPB-208ENST00000561271 METRNLQ641Q3 311 aa16.83■□□□□ 0.28
CDC42BPB-208ENST00000561271 SNX20Q7Z614 316 aa16.83■□□□□ 0.28
CDC42BPB-208ENST00000561271 LILRA3Q8N6C8 439 aaPredicted RBP16.83■□□□□ 0.28
CDC42BPB-208ENST00000561271 SPDYE1Q8NFV5 336 aaPredicted RBP16.83■□□□□ 0.28
CDC42BPB-208ENST00000561271 OR2L2Q8NH16 312 aa16.83■□□□□ 0.28
CDC42BPB-208ENST00000561271 EXTL1Q92935 676 aa16.83■□□□□ 0.28
CDC42BPB-208ENST00000561271 DCUN1D1Q96GG9 259 aa16.83■□□□□ 0.28
CDC42BPB-208ENST00000561271 RMDN2Q96LZ7 410 aa16.83■□□□□ 0.28
CDC42BPB-208ENST00000561271 C12orf66Q96MD2 445 aa16.83■□□□□ 0.28
CDC42BPB-208ENST00000561271 ZNF768Q9H5H4 540 aaKnown RBP16.83■□□□□ 0.28
CDC42BPB-208ENST00000561271 FBXO8Q9NRD0 319 aa16.83■□□□□ 0.28
CDC42BPB-208ENST00000561271 PILRAQ9UKJ1 303 aa16.83■□□□□ 0.28
CDC42BPB-208ENST00000561271 POLR1CO15160 346 aaPredicted RBP16.82■□□□□ 0.28
CDC42BPB-208ENST00000561271 LIASO43766 372 aa16.82■□□□□ 0.28
CDC42BPB-208ENST00000561271 STK17BO94768 372 aa16.82■□□□□ 0.28
CDC42BPB-208ENST00000561271 SLC35G4P0C7Q5 338 aa16.82■□□□□ 0.28
CDC42BPB-208ENST00000561271 RALBP11234 206 aa16.82■□□□□ 0.28
CDC42BPB-208ENST00000561271 PRLHRP49683 370 aa16.82■□□□□ 0.28
CDC42BPB-208ENST00000561271 OASLQ15646 514 aaKnown RBP16.82■□□□□ 0.28
CDC42BPB-208ENST00000561271 ZRANB3Q5FWF4 1079 aa16.82■□□□□ 0.28
CDC42BPB-208ENST00000561271 PRSS42Q7Z5A4 293 aa16.82■□□□□ 0.28
CDC42BPB-208ENST00000561271 SLC13A5Q86YT5 568 aaPredicted RBP16.82■□□□□ 0.28
CDC42BPB-208ENST00000561271 ZSCAN1Q8NBB4 408 aa16.82■□□□□ 0.28
CDC42BPB-208ENST00000561271 C1orf54Q8WWF1 131 aa16.82■□□□□ 0.28
CDC42BPB-208ENST00000561271 INSM2Q96T92 566 aaPredicted RBP16.82■□□□□ 0.28
CDC42BPB-208ENST00000561271 COPS8Q99627 209 aa16.82■□□□□ 0.28
CDC42BPB-208ENST00000561271 NLE1Q9NVX2 485 aaPredicted RBP16.82■□□□□ 0.28
CDC42BPB-208ENST00000561271 PCM1Q15154 2024 aa16.82■□□□□ 0.28
CDC42BPB-208ENST00000561271 CFAP99D6REC4 459 aa16.81■□□□□ 0.28
CDC42BPB-208ENST00000561271 ARHGAP6O43182 974 aa16.81■□□□□ 0.28
CDC42BPB-208ENST00000561271 IFNB1P01574 187 aa16.81■□□□□ 0.28
CDC42BPB-208ENST00000561271 POLBP06746 335 aa16.81■□□□□ 0.28
CDC42BPB-208ENST00000561271 CACHD1Q5VU97 1274 aa16.81■□□□□ 0.28
CDC42BPB-208ENST00000561271 TIPARPQ7Z3E1 657 aaKnown RBP16.81■□□□□ 0.28
CDC42BPB-208ENST00000561271 PRUNE1Q86TP1 453 aa16.81■□□□□ 0.28
CDC42BPB-208ENST00000561271 SERPINA9Q86WD7 417 aa16.81■□□□□ 0.28
CDC42BPB-208ENST00000561271 NLGN4XQ8N0W4 816 aa16.81■□□□□ 0.28
CDC42BPB-208ENST00000561271 NLGN4YQ8NFZ3 816 aaPredicted RBP16.81■□□□□ 0.28
CDC42BPB-208ENST00000561271 OR52K1Q8NGK4 314 aa16.81■□□□□ 0.28
CDC42BPB-208ENST00000561271 HM13Q8TCT9 377 aa16.81■□□□□ 0.28
CDC42BPB-208ENST00000561271 LINC00615Q96LM1 132 aaPredicted RBP16.81■□□□□ 0.28
CDC42BPB-208ENST00000561271 C19orf43Q9BQ61 176 aa16.81■□□□□ 0.28
CDC42BPB-208ENST00000561271 SPRY4Q9C004 299 aa16.81■□□□□ 0.28
CDC42BPB-208ENST00000561271 ZDHHC3Q9NYG2 299 aa16.81■□□□□ 0.28
CDC42BPB-208ENST00000561271 IGLV3-16A0A075B6K0 115 aa16.8■□□□□ 0.28
CDC42BPB-208ENST00000561271 TRBV5-4A0A0C4DH59 114 aa16.8■□□□□ 0.28
CDC42BPB-208ENST00000561271 H7C0S8 307 aa16.8■□□□□ 0.28
CDC42BPB-208ENST00000561271 TOX3O15405 576 aaPredicted RBP16.8■□□□□ 0.28
CDC42BPB-208ENST00000561271 DLGAP3O95886 979 aa16.8■□□□□ 0.28
CDC42BPB-208ENST00000561271 ATP1B2P14415 290 aaPredicted RBP16.8■□□□□ 0.28
CDC42BPB-208ENST00000561271 ETS1P14921 441 aa16.8■□□□□ 0.28
CDC42BPB-208ENST00000561271 ZNF28P17035 718 aa16.8■□□□□ 0.28
CDC42BPB-208ENST00000561271 ACRV1P26436 265 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms