RNA–Protein interactions for RNA: ENST00000561059.5

PSME1-208, Transcript of proteasome activator subunit 1, humanhuman

TSL 2

Gene PSME1, Length 947 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME1-208ENST00000561059 FAM118BQ9BPY3 351 aa13.1□□□□□ -0.31
PSME1-208ENST00000561059 FICDQ9BVA6 458 aa13.1□□□□□ -0.31
PSME1-208ENST00000561059 TRIM55Q9BYV6 548 aa13.1□□□□□ -0.31
PSME1-208ENST00000561059 ACTL8Q9H568 366 aa13.1□□□□□ -0.31
PSME1-208ENST00000561059 LHX9Q9NQ69 397 aa13.1□□□□□ -0.31
PSME1-208ENST00000561059 ANKMY1Q9P2S6 941 aa13.1□□□□□ -0.31
PSME1-208ENST00000561059 RSPH14Q9UHP6 348 aa13.1□□□□□ -0.31
PSME1-208ENST00000561059 TLK1Q9UKI8 766 aa13.1□□□□□ -0.31
PSME1-208ENST00000561059 RARRES3Q9UL19 164 aa13.1□□□□□ -0.31
PSME1-208ENST00000561059 PADI1Q9ULC6 663 aa13.1□□□□□ -0.31
PSME1-208ENST00000561059 POLHQ9Y253 713 aa13.1□□□□□ -0.31
PSME1-208ENST00000561059 ALG6Q9Y672 507 aa13.1□□□□□ -0.31
PSME1-208ENST00000561059 ZNF106Q9H2Y7 1883 aaKnown RBP13.1□□□□□ -0.31
PSME1-208ENST00000561059 USP9YO00507 2555 aaPredicted RBP13.1□□□□□ -0.31
PSME1-208ENST00000561059 hCG_1818297A0A087WSY0 165 aa13.09□□□□□ -0.31
PSME1-208ENST00000561059 NBPF19A0A087WUL8 3843 aa13.09□□□□□ -0.31
PSME1-208ENST00000561059 OR6C74A6NCV1 312 aa13.09□□□□□ -0.31
PSME1-208ENST00000561059 CREG1O75629 220 aa13.09□□□□□ -0.31
PSME1-208ENST00000561059 POLBP06746 335 aa13.09□□□□□ -0.31
PSME1-208ENST00000561059 TPM1P09493 284 aa13.09□□□□□ -0.31
PSME1-208ENST00000561059 MTHFD1P11586 935 aaKnown RBP13.09□□□□□ -0.31
PSME1-208ENST00000561059 MSH3P20585 1137 aa13.09□□□□□ -0.31
PSME1-208ENST00000561059 RBL1P28749 1068 aa13.09□□□□□ -0.31
PSME1-208ENST00000561059 TNNT3P45378 269 aaPredicted RBP13.09□□□□□ -0.31
PSME1-208ENST00000561059 ARL4DP49703 201 aa13.09□□□□□ -0.31
PSME1-208ENST00000561059 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.09□□□□□ -0.31
PSME1-208ENST00000561059 DNTTIP2Q5QJE6 756 aaKnown RBP13.09□□□□□ -0.31
PSME1-208ENST00000561059 LDLRAP1Q5SW96 308 aa13.09□□□□□ -0.31
PSME1-208ENST00000561059 FAM69BQ5VUD6 431 aa13.09□□□□□ -0.31
PSME1-208ENST00000561059 ASB18Q6ZVZ8 466 aa13.09□□□□□ -0.31
PSME1-208ENST00000561059 DAAM2Q86T65 1068 aa13.09□□□□□ -0.31
PSME1-208ENST00000561059 RBM12BQ8IXT5 1001 aaKnown RBP13.09□□□□□ -0.31
PSME1-208ENST00000561059 DDHD1Q8NEL9 900 aa13.09□□□□□ -0.31
PSME1-208ENST00000561059 BRSK1Q8TDC3 778 aa13.09□□□□□ -0.31
PSME1-208ENST00000561059 KRT35Q92764 455 aa13.09□□□□□ -0.31
PSME1-208ENST00000561059 SLC41A2Q96JW4 573 aa13.09□□□□□ -0.31
PSME1-208ENST00000561059 C12orf66Q96MD2 445 aa13.09□□□□□ -0.31
PSME1-208ENST00000561059 QKIQ96PU8 341 aaKnown RBP eCLIP13.09□□□□□ -0.31
PSME1-208ENST00000561059 FCRL5Q96RD9 977 aa13.09□□□□□ -0.31
PSME1-208ENST00000561059 SRPK1Q96SB4 655 aaKnown RBP13.09□□□□□ -0.31
PSME1-208ENST00000561059 GORASP1Q9BQQ3 440 aa13.09□□□□□ -0.31
PSME1-208ENST00000561059 FSD1LQ9BXM9 530 aa13.09□□□□□ -0.31
PSME1-208ENST00000561059 ZCCHC2Q9C0B9 1178 aaKnown RBP13.09□□□□□ -0.31
PSME1-208ENST00000561059 TRABDQ9H4I3 376 aa13.09□□□□□ -0.31
PSME1-208ENST00000561059 FAM96AQ9H5X1 160 aa13.09□□□□□ -0.31
PSME1-208ENST00000561059 PDE7BQ9NP56 450 aa13.09□□□□□ -0.31
PSME1-208ENST00000561059 FGF21Q9NSA1 209 aa13.09□□□□□ -0.31
PSME1-208ENST00000561059 HRASLS2Q9NWW9 162 aa13.09□□□□□ -0.31
PSME1-208ENST00000561059 EPHA6Q9UF33 1036 aa13.09□□□□□ -0.31
PSME1-208ENST00000561059 FKBPLQ9UIM3 349 aa13.09□□□□□ -0.31
PSME1-208ENST00000561059 MAN2B2Q9Y2E5 1009 aa13.09□□□□□ -0.31
PSME1-208ENST00000561059 PKP3Q9Y446 797 aa13.09□□□□□ -0.31
PSME1-208ENST00000561059 TEX15Q9BXT5 2789 aa13.09□□□□□ -0.31
PSME1-208ENST00000561059 UBA6A0AVT1 1052 aaPredicted RBP13.08□□□□□ -0.32
PSME1-208ENST00000561059 MACROD2A1Z1Q3 448 aa13.08□□□□□ -0.32
PSME1-208ENST00000561059 MKRN2OSH3BPM6 223 aa13.08□□□□□ -0.32
PSME1-208ENST00000561059 H7C0C1 242 aa13.08□□□□□ -0.32
PSME1-208ENST00000561059 CCL22O00626 93 aa13.08□□□□□ -0.32
PSME1-208ENST00000561059 STX7O15400 261 aaKnown RBP13.08□□□□□ -0.32
PSME1-208ENST00000561059 PSTPIP1O43586 416 aa13.08□□□□□ -0.32
PSME1-208ENST00000561059 RFPL1O75677 317 aa13.08□□□□□ -0.32
PSME1-208ENST00000561059 PRAMEF1O95521 474 aa13.08□□□□□ -0.32
PSME1-208ENST00000561059 ATXN8OSP0DMR3 200 aa13.08□□□□□ -0.32
PSME1-208ENST00000561059 ATP5OP48047 213 aa13.08□□□□□ -0.32
PSME1-208ENST00000561059 TMPRSS15P98073 1019 aa13.08□□□□□ -0.32
PSME1-208ENST00000561059 DMPKQ09013 629 aa13.08□□□□□ -0.32
PSME1-208ENST00000561059 KLRB1Q12918 225 aa13.08□□□□□ -0.32
PSME1-208ENST00000561059 TFDP3Q5H9I0 405 aa13.08□□□□□ -0.32
PSME1-208ENST00000561059 BZW1Q7L1Q6 419 aaKnown RBP13.08□□□□□ -0.32
PSME1-208ENST00000561059 TEX19Q8NA77 164 aa13.08□□□□□ -0.32
PSME1-208ENST00000561059 OR4K2Q8NGD2 314 aa13.08□□□□□ -0.32
PSME1-208ENST00000561059 ZNF398Q8TD17 642 aa13.08□□□□□ -0.32
PSME1-208ENST00000561059 RMDN2Q96LZ7 410 aa13.08□□□□□ -0.32
PSME1-208ENST00000561059 KCND3Q9UK17 655 aa13.08□□□□□ -0.32
PSME1-208ENST00000561059 OR5K3A6NET4 321 aa13.07□□□□□ -0.32
PSME1-208ENST00000561059 GOLGA6L3A6NEY3 463 aa13.07□□□□□ -0.32
PSME1-208ENST00000561059 ZRANB2O95218 330 aaKnown RBP eCLIP13.07□□□□□ -0.32
PSME1-208ENST00000561059 LCA5LO95447 670 aa13.07□□□□□ -0.32
PSME1-208ENST00000561059 EPOP01588 193 aa13.07□□□□□ -0.32
PSME1-208ENST00000561059 POLR2CP19387 275 aaPredicted RBP13.07□□□□□ -0.32
PSME1-208ENST00000561059 HLA-DPA1P20036 260 aa13.07□□□□□ -0.32
PSME1-208ENST00000561059 MAGEA1P43355 309 aa13.07□□□□□ -0.32
PSME1-208ENST00000561059 KPNA2P52292 529 aaKnown RBP13.07□□□□□ -0.32
PSME1-208ENST00000561059 PMS2P54278 862 aa13.07□□□□□ -0.32
PSME1-208ENST00000561059 IL10RAQ13651 578 aa13.07□□□□□ -0.32
PSME1-208ENST00000561059 LONRF2Q1L5Z9 754 aa13.07□□□□□ -0.32
PSME1-208ENST00000561059 CRTC2Q53ET0 693 aaPredicted RBP13.07□□□□□ -0.32
PSME1-208ENST00000561059 METRNLQ641Q3 311 aa13.07□□□□□ -0.32
PSME1-208ENST00000561059 LCN10Q6JVE6 187 aa13.07□□□□□ -0.32
PSME1-208ENST00000561059 OR13C4Q8NGS5 318 aa13.07□□□□□ -0.32
PSME1-208ENST00000561059 UBXN4Q92575 508 aa13.07□□□□□ -0.32
PSME1-208ENST00000561059 MR1Q95460 341 aa13.07□□□□□ -0.32
PSME1-208ENST00000561059 ZNF514Q96K75 400 aaPredicted RBP13.07□□□□□ -0.32
PSME1-208ENST00000561059 TLR10Q9BXR5 811 aa13.07□□□□□ -0.32
PSME1-208ENST00000561059 RAB33BQ9H082 229 aa13.07□□□□□ -0.32
PSME1-208ENST00000561059 ASB8Q9H765 288 aa13.07□□□□□ -0.32
PSME1-208ENST00000561059 SOHLH2Q9NX45 425 aa13.07□□□□□ -0.32
PSME1-208ENST00000561059 HACD3Q9P035 362 aa13.07□□□□□ -0.32
PSME1-208ENST00000561059 SLC24A2Q9UI40 661 aa13.07□□□□□ -0.32
PSME1-208ENST00000561059 MGAT4DA6NG13 374 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms