RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 DAB2P98082 770 aa9.45□□□□□ -0.9
RABGGTA-221ENST00000561055 E2F1Q01094 437 aa9.45□□□□□ -0.9
RABGGTA-221ENST00000561055 PLOD1Q02809 727 aaPredicted RBP9.45□□□□□ -0.9
RABGGTA-221ENST00000561055 SQSTM1Q13501 440 aa9.45□□□□□ -0.9
RABGGTA-221ENST00000561055 CUL1Q13616 776 aa9.45□□□□□ -0.9
RABGGTA-221ENST00000561055 THOC5Q13769 683 aaKnown RBP9.45□□□□□ -0.9
RABGGTA-221ENST00000561055 FASTKD3Q14CZ7 662 aaKnown RBP9.45□□□□□ -0.9
RABGGTA-221ENST00000561055 HSP90AA5PQ58FG0 334 aa9.45□□□□□ -0.9
RABGGTA-221ENST00000561055 PPM1JQ5JR12 505 aa9.45□□□□□ -0.9
RABGGTA-221ENST00000561055 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.45□□□□□ -0.9
RABGGTA-221ENST00000561055 CAPRIN2Q6IMN6 1127 aaKnown RBP9.45□□□□□ -0.9
RABGGTA-221ENST00000561055 CEP128Q6ZU80 1094 aa9.45□□□□□ -0.9
RABGGTA-221ENST00000561055 DET1Q7L5Y6 550 aa9.45□□□□□ -0.9
RABGGTA-221ENST00000561055 LDB1Q86U70 411 aaPredicted RBP9.45□□□□□ -0.9
RABGGTA-221ENST00000561055 SLCO6A1Q86UG4 719 aa9.45□□□□□ -0.9
RABGGTA-221ENST00000561055 KCNMB4Q86W47 210 aa9.45□□□□□ -0.9
RABGGTA-221ENST00000561055 ZBED8Q8IZ13 594 aa9.45□□□□□ -0.9
RABGGTA-221ENST00000561055 ARL14Q8N4G2 192 aa9.45□□□□□ -0.9
RABGGTA-221ENST00000561055 PNPLA1Q8N8W4 532 aa9.45□□□□□ -0.9
RABGGTA-221ENST00000561055 KYQ8NBH2 561 aa9.45□□□□□ -0.9
RABGGTA-221ENST00000561055 C2CD4AQ8NCU7 369 aaPredicted RBP9.45□□□□□ -0.9
RABGGTA-221ENST00000561055 FBXO36Q8NEA4 188 aa9.45□□□□□ -0.9
RABGGTA-221ENST00000561055 GSDMBQ8TAX9 411 aa9.45□□□□□ -0.9
RABGGTA-221ENST00000561055 HM13Q8TCT9 377 aa9.45□□□□□ -0.9
RABGGTA-221ENST00000561055 ADAMTS14Q8WXS8 1223 aa9.45□□□□□ -0.9
RABGGTA-221ENST00000561055 LPGAT1Q92604 370 aa9.45□□□□□ -0.9
RABGGTA-221ENST00000561055 FAM167BQ9BTA0 163 aa9.45□□□□□ -0.9
RABGGTA-221ENST00000561055 SARS2Q9NP81 518 aaKnown RBP9.45□□□□□ -0.9
RABGGTA-221ENST00000561055 C20orf96Q9NUD7 363 aaPredicted RBP9.45□□□□□ -0.9
RABGGTA-221ENST00000561055 FBXO5Q9UKT4 447 aa9.45□□□□□ -0.9
RABGGTA-221ENST00000561055 PCDHB1Q9Y5F3 818 aa9.45□□□□□ -0.9
RABGGTA-221ENST00000561055 COMMD10Q9Y6G5 202 aa9.45□□□□□ -0.9
RABGGTA-221ENST00000561055 SPTBN2O15020 2390 aa9.44□□□□□ -0.9
RABGGTA-221ENST00000561055 SPAARA0A1B0GVQ0 90 aa9.44□□□□□ -0.9
RABGGTA-221ENST00000561055 SLC5A10A0PJK1 596 aa9.44□□□□□ -0.9
RABGGTA-221ENST00000561055 B4DGG1 531 aa9.44□□□□□ -0.9
RABGGTA-221ENST00000561055 GOLGA8KD6RF30 607 aa9.44□□□□□ -0.9
RABGGTA-221ENST00000561055 H3BMM5 538 aa9.44□□□□□ -0.9
RABGGTA-221ENST00000561055 GOLGA8TH3BQL2 631 aa9.44□□□□□ -0.9
RABGGTA-221ENST00000561055 KPNA5O15131 536 aa9.44□□□□□ -0.9
RABGGTA-221ENST00000561055 GPC4O75487 556 aa9.44□□□□□ -0.9
RABGGTA-221ENST00000561055 RFPL3O75679 317 aa9.44□□□□□ -0.9
RABGGTA-221ENST00000561055 FTH1P19P0C7X4 201 aa9.44□□□□□ -0.9
RABGGTA-221ENST00000561055 CD9P21926 228 aa9.44□□□□□ -0.9
RABGGTA-221ENST00000561055 ECHS1P30084 290 aa9.44□□□□□ -0.9
RABGGTA-221ENST00000561055 SLC1A2P43004 574 aa9.44□□□□□ -0.9
RABGGTA-221ENST00000561055 MAGEA4P43358 317 aa9.44□□□□□ -0.9
RABGGTA-221ENST00000561055 GPR3P46089 330 aa9.44□□□□□ -0.9
RABGGTA-221ENST00000561055 UBE2IP63279 158 aaKnown RBP9.44□□□□□ -0.9
RABGGTA-221ENST00000561055 ILF2Q12905 390 aaKnown RBP9.44□□□□□ -0.9
RABGGTA-221ENST00000561055 DNAJC3Q13217 504 aa9.44□□□□□ -0.9
RABGGTA-221ENST00000561055 CTBP1Q13363 440 aa9.44□□□□□ -0.9
RABGGTA-221ENST00000561055 NFE2L1Q14494 772 aa9.44□□□□□ -0.9
RABGGTA-221ENST00000561055 DNTTIP2Q5QJE6 756 aaKnown RBP9.44□□□□□ -0.9
RABGGTA-221ENST00000561055 TEDDM1Q5T9Z0 273 aa9.44□□□□□ -0.9
RABGGTA-221ENST00000561055 ZNF470Q6ECI4 717 aa9.44□□□□□ -0.9
RABGGTA-221ENST00000561055 GUSBP11Q6P575 273 aa9.44□□□□□ -0.9
RABGGTA-221ENST00000561055 FAM83HQ6ZRV2 1179 aaPredicted RBP9.44□□□□□ -0.9
RABGGTA-221ENST00000561055 ERMP1Q7Z2K6 904 aa9.44□□□□□ -0.9
RABGGTA-221ENST00000561055 DGLUCYQ7Z3D6 616 aa9.44□□□□□ -0.9
RABGGTA-221ENST00000561055 ANKMY2Q8IV38 441 aa9.44□□□□□ -0.9
RABGGTA-221ENST00000561055 DENND6AQ8IWF6 608 aa9.44□□□□□ -0.9
RABGGTA-221ENST00000561055 SFTPA2Q8IWL1 248 aa9.44□□□□□ -0.9
RABGGTA-221ENST00000561055 RBM12BQ8IXT5 1001 aaKnown RBP9.44□□□□□ -0.9
RABGGTA-221ENST00000561055 IFT20Q8IY31 132 aa9.44□□□□□ -0.9
RABGGTA-221ENST00000561055 CFAP206Q8IYR0 622 aa9.44□□□□□ -0.9
RABGGTA-221ENST00000561055 UNC5BQ8IZJ1 945 aa9.44□□□□□ -0.9
RABGGTA-221ENST00000561055 WDR48Q8TAF3 677 aa9.44□□□□□ -0.9
RABGGTA-221ENST00000561055 MAPK15Q8TD08 544 aa9.44□□□□□ -0.9
RABGGTA-221ENST00000561055 SLC37A2Q8TED4 501 aa9.44□□□□□ -0.9
RABGGTA-221ENST00000561055 PYROXD1Q8WU10 500 aa9.44□□□□□ -0.9
RABGGTA-221ENST00000561055 ZFPM2Q8WW38 1151 aa9.44□□□□□ -0.9
RABGGTA-221ENST00000561055 SH3KBP1Q96B97 665 aa9.44□□□□□ -0.9
RABGGTA-221ENST00000561055 PANX3Q96QZ0 392 aa9.44□□□□□ -0.9
RABGGTA-221ENST00000561055 TSSK1BQ9BXA7 367 aa9.44□□□□□ -0.9
RABGGTA-221ENST00000561055 COG4Q9H9E3 785 aa9.44□□□□□ -0.9
RABGGTA-221ENST00000561055 UCK1Q9HA47 277 aa9.44□□□□□ -0.9
RABGGTA-221ENST00000561055 SAYSD1Q9NPB0 183 aa9.44□□□□□ -0.9
RABGGTA-221ENST00000561055 PRDM8Q9NQV8 689 aa9.44□□□□□ -0.9
RABGGTA-221ENST00000561055 IL1RAPL1Q9NZN1 696 aa9.44□□□□□ -0.9
RABGGTA-221ENST00000561055 SIRPGQ9P1W8 387 aa9.44□□□□□ -0.9
RABGGTA-221ENST00000561055 ZNF624Q9P2J8 865 aaPredicted RBP9.44□□□□□ -0.9
RABGGTA-221ENST00000561055 KLHL42Q9P2K6 505 aa9.44□□□□□ -0.9
RABGGTA-221ENST00000561055 GNPTGQ9UJJ9 305 aa9.44□□□□□ -0.9
RABGGTA-221ENST00000561055 DNAJC16Q9Y2G8 782 aa9.44□□□□□ -0.9
RABGGTA-221ENST00000561055 HEATR5BQ9P2D3 2071 aa9.43□□□□□ -0.9
RABGGTA-221ENST00000561055 FAM221BA6H8Z2 402 aa9.43□□□□□ -0.9
RABGGTA-221ENST00000561055 PPM1DO15297 605 aa9.43□□□□□ -0.9
RABGGTA-221ENST00000561055 SPAG6O75602 509 aa9.43□□□□□ -0.9
RABGGTA-221ENST00000561055 SLCO2B1O94956 709 aa9.43□□□□□ -0.9
RABGGTA-221ENST00000561055 C1QAP02745 245 aa9.43□□□□□ -0.9
RABGGTA-221ENST00000561055 AHSGP02765 367 aa9.43□□□□□ -0.9
RABGGTA-221ENST00000561055 ERVK-10P10266 1014 aa9.43□□□□□ -0.9
RABGGTA-221ENST00000561055 MYF5P13349 255 aa9.43□□□□□ -0.9
RABGGTA-221ENST00000561055 PKMP14618 531 aaKnown RBP9.43□□□□□ -0.9
RABGGTA-221ENST00000561055 AOAHP28039 575 aa9.43□□□□□ -0.9
RABGGTA-221ENST00000561055 GABRB3P28472 473 aa9.43□□□□□ -0.9
RABGGTA-221ENST00000561055 SSTR1P30872 391 aa9.43□□□□□ -0.9
RABGGTA-221ENST00000561055 CCR7P32248 378 aa9.43□□□□□ -0.9
RABGGTA-221ENST00000561055 SLC19A1P41440 591 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms