RNA–Protein interactions for RNA: ENST00000560634.1

CSPG4P11-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 11, humanhuman

BASIC

Gene CSPG4P11, Length 4,910 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P11-201ENST00000560634 KHDC1Q4VXA5 237 aaKnown RBP13.06□□□□□ -0.32
CSPG4P11-201ENST00000560634 UTS2BQ765I0 119 aa13.06□□□□□ -0.32
CSPG4P11-201ENST00000560634 AQP12AQ8IXF9 295 aa13.06□□□□□ -0.32
CSPG4P11-201ENST00000560634 SLC9A6Q92581 669 aa13.06□□□□□ -0.32
CSPG4P11-201ENST00000560634 MFSD3Q96ES6 412 aa13.06□□□□□ -0.32
CSPG4P11-201ENST00000560634 PURBQ96QR8 312 aaKnown RBP13.06□□□□□ -0.32
CSPG4P11-201ENST00000560634 GPATCH1Q9BRR8 931 aaKnown RBP13.06□□□□□ -0.32
CSPG4P11-201ENST00000560634 YTHDF1Q9BYJ9 559 aaKnown RBP13.06□□□□□ -0.32
CSPG4P11-201ENST00000560634 ARHGEF4Q9NR80 690 aa13.06□□□□□ -0.32
CSPG4P11-201ENST00000560634 C1orf109Q9NX04 203 aa13.06□□□□□ -0.32
CSPG4P11-201ENST00000560634 POMPQ9Y244 141 aa13.06□□□□□ -0.32
CSPG4P11-201ENST00000560634 NR2E3Q9Y5X4 410 aa13.06□□□□□ -0.32
CSPG4P11-201ENST00000560634 PRMT3O60678 531 aa13.05□□□□□ -0.32
CSPG4P11-201ENST00000560634 H6PDO95479 791 aa13.05□□□□□ -0.32
CSPG4P11-201ENST00000560634 UGT2B4P06133 528 aa13.05□□□□□ -0.32
CSPG4P11-201ENST00000560634 CYP3A5P20815 502 aa13.05□□□□□ -0.32
CSPG4P11-201ENST00000560634 PEX2P28328 305 aa13.05□□□□□ -0.32
CSPG4P11-201ENST00000560634 AKT2P31751 481 aa13.05□□□□□ -0.32
CSPG4P11-201ENST00000560634 PPP3R1P63098 170 aa13.05□□□□□ -0.32
CSPG4P11-201ENST00000560634 CHIT1Q13231 466 aa13.05□□□□□ -0.32
CSPG4P11-201ENST00000560634 ADGRE1Q14246 886 aa13.05□□□□□ -0.32
CSPG4P11-201ENST00000560634 ZDHHC21Q8IVQ6 265 aa13.05□□□□□ -0.32
CSPG4P11-201ENST00000560634 SLC30A8Q8IWU4 369 aa13.05□□□□□ -0.32
CSPG4P11-201ENST00000560634 ZNF567Q8N184 647 aa13.05□□□□□ -0.32
CSPG4P11-201ENST00000560634 CHST4Q8NCG5 386 aa13.05□□□□□ -0.32
CSPG4P11-201ENST00000560634 PPTC7Q8NI37 304 aa13.05□□□□□ -0.32
CSPG4P11-201ENST00000560634 C9orf43Q8TAL5 461 aaPredicted RBP13.05□□□□□ -0.32
CSPG4P11-201ENST00000560634 SUN5Q8TC36 379 aa13.05□□□□□ -0.32
CSPG4P11-201ENST00000560634 LRTOMTQ8WZ04 291 aa13.05□□□□□ -0.32
CSPG4P11-201ENST00000560634 C8orf48Q96LL4 319 aa13.05□□□□□ -0.32
CSPG4P11-201ENST00000560634 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.05□□□□□ -0.32
CSPG4P11-201ENST00000560634 MAP4K5Q9Y4K4 846 aa13.05□□□□□ -0.32
CSPG4P11-201ENST00000560634 RNF225M0QZC1 329 aaPredicted RBP13.05□□□□□ -0.32
CSPG4P11-201ENST00000560634 CXCR6O00574 342 aa13.05□□□□□ -0.32
CSPG4P11-201ENST00000560634 NDST2P52849 883 aa13.05□□□□□ -0.32
CSPG4P11-201ENST00000560634 PITPNAQ00169 270 aa13.05□□□□□ -0.32
CSPG4P11-201ENST00000560634 UGCGQ16739 394 aa13.05□□□□□ -0.32
CSPG4P11-201ENST00000560634 FEM1CQ96JP0 617 aa13.05□□□□□ -0.32
CSPG4P11-201ENST00000560634 MGME1Q9BQP7 344 aa13.05□□□□□ -0.32
CSPG4P11-201ENST00000560634 CNPPD1Q9BV87 410 aa13.05□□□□□ -0.32
CSPG4P11-201ENST00000560634 PRRG4Q9BZD6 226 aa13.05□□□□□ -0.32
CSPG4P11-201ENST00000560634 PCBD2Q9H0N5 130 aa13.05□□□□□ -0.32
CSPG4P11-201ENST00000560634 MFSD1Q9H3U5 465 aa13.05□□□□□ -0.32
CSPG4P11-201ENST00000560634 ZNF224Q9NZL3 707 aa13.05□□□□□ -0.32
CSPG4P11-201ENST00000560634 MSRAQ9UJ68 235 aa13.05□□□□□ -0.32
CSPG4P11-201ENST00000560634 TBC1D3DA0A087WVF3 549 aa13.05□□□□□ -0.32
CSPG4P11-201ENST00000560634 TBC1D3IA0A087WXS9 549 aa13.05□□□□□ -0.32
CSPG4P11-201ENST00000560634 TBC1D3EA0A087X179 549 aa13.05□□□□□ -0.32
CSPG4P11-201ENST00000560634 TBC1D3KA0A087X1G2 549 aa13.05□□□□□ -0.32
CSPG4P11-201ENST00000560634 TBC1D3FA6NER0 549 aaPredicted RBP13.05□□□□□ -0.32
CSPG4P11-201ENST00000560634 PRORSD1PA6NEY8 169 aa13.05□□□□□ -0.32
CSPG4P11-201ENST00000560634 TBC1D3LB9A6J9 549 aa13.05□□□□□ -0.32
CSPG4P11-201ENST00000560634 PDCD5O14737 125 aa13.05□□□□□ -0.32
CSPG4P11-201ENST00000560634 IRF6O14896 467 aa13.05□□□□□ -0.32
CSPG4P11-201ENST00000560634 GLUD1P00367 558 aa13.05□□□□□ -0.32
CSPG4P11-201ENST00000560634 C8GP07360 202 aa13.05□□□□□ -0.32
CSPG4P11-201ENST00000560634 TBC1D3HP0C7X1 549 aa13.05□□□□□ -0.32
CSPG4P11-201ENST00000560634 CMPK1P30085 196 aa13.05□□□□□ -0.32
CSPG4P11-201ENST00000560634 CDH12P55289 794 aa13.05□□□□□ -0.32
CSPG4P11-201ENST00000560634 ARPC4P59998 168 aa13.05□□□□□ -0.32
CSPG4P11-201ENST00000560634 TBC1D3GQ6DHY5 549 aa13.05□□□□□ -0.32
CSPG4P11-201ENST00000560634 CLEC6AQ6EIG7 209 aa13.05□□□□□ -0.32
CSPG4P11-201ENST00000560634 TBC1D3CQ6IPX1 549 aa13.05□□□□□ -0.32
CSPG4P11-201ENST00000560634 ADGRG6Q86SQ4 1221 aa13.05□□□□□ -0.32
CSPG4P11-201ENST00000560634 TBC1D3Q8IZP1 549 aaPredicted RBP13.05□□□□□ -0.32
CSPG4P11-201ENST00000560634 MPP5Q8N3R9 675 aa13.05□□□□□ -0.32
CSPG4P11-201ENST00000560634 OR5K1Q8NHB7 308 aa13.05□□□□□ -0.32
CSPG4P11-201ENST00000560634 NMUR1Q9HB89 426 aa13.05□□□□□ -0.32
CSPG4P11-201ENST00000560634 A0A1B0GVM2 712 aa13.05□□□□□ -0.32
CSPG4P11-201ENST00000560634 EME2A4GXA9 379 aaPredicted RBP13.05□□□□□ -0.32
CSPG4P11-201ENST00000560634 TCAF2A6NFQ2 919 aa13.05□□□□□ -0.32
CSPG4P11-201ENST00000560634 LSM1O15116 133 aaKnown RBP13.05□□□□□ -0.32
CSPG4P11-201ENST00000560634 VIPP01282 170 aa13.05□□□□□ -0.32
CSPG4P11-201ENST00000560634 NT5EP21589 574 aa13.05□□□□□ -0.32
CSPG4P11-201ENST00000560634 ICAM3P32942 547 aa13.05□□□□□ -0.32
CSPG4P11-201ENST00000560634 CCR10P46092 362 aa13.05□□□□□ -0.32
CSPG4P11-201ENST00000560634 IDH3AP50213 366 aa13.05□□□□□ -0.32
CSPG4P11-201ENST00000560634 GNA12Q03113 381 aa13.05□□□□□ -0.32
CSPG4P11-201ENST00000560634 VWA5B1Q5TIE3 1220 aa13.05□□□□□ -0.32
CSPG4P11-201ENST00000560634 KCTD8Q6ZWB6 473 aa13.05□□□□□ -0.32
CSPG4P11-201ENST00000560634 ANKS1BQ7Z6G8 1248 aa13.05□□□□□ -0.32
CSPG4P11-201ENST00000560634 CFAP52Q8N1V2 620 aa13.05□□□□□ -0.32
CSPG4P11-201ENST00000560634 OR4C6Q8NH72 309 aa13.05□□□□□ -0.32
CSPG4P11-201ENST00000560634 SLC22A17Q8WUG5 538 aa13.05□□□□□ -0.32
CSPG4P11-201ENST00000560634 SLC13A3Q8WWT9 602 aa13.05□□□□□ -0.32
CSPG4P11-201ENST00000560634 EXOSC8Q96B26 276 aaKnown RBP13.05□□□□□ -0.32
CSPG4P11-201ENST00000560634 COPS4Q9BT78 406 aa13.05□□□□□ -0.32
CSPG4P11-201ENST00000560634 OSBPL7Q9BZF2 842 aa13.05□□□□□ -0.32
CSPG4P11-201ENST00000560634 COMMD4Q9H0A8 199 aa13.05□□□□□ -0.32
CSPG4P11-201ENST00000560634 AASSQ9UDR5 926 aa13.05□□□□□ -0.32
CSPG4P11-201ENST00000560634 CLEC4AQ9UMR7 237 aa13.05□□□□□ -0.32
CSPG4P11-201ENST00000560634 SNX4O95219 450 aa13.04□□□□□ -0.32
CSPG4P11-201ENST00000560634 PRAMEF1O95521 474 aa13.04□□□□□ -0.32
CSPG4P11-201ENST00000560634 ADAM8P78325 824 aa13.04□□□□□ -0.32
CSPG4P11-201ENST00000560634 DUSP4Q13115 394 aa13.04□□□□□ -0.32
CSPG4P11-201ENST00000560634 DUSP28Q4G0W2 176 aa13.04□□□□□ -0.32
CSPG4P11-201ENST00000560634 USP43Q70EL4 1123 aa13.04□□□□□ -0.32
CSPG4P11-201ENST00000560634 CPNE9Q8IYJ1 553 aa13.04□□□□□ -0.32
CSPG4P11-201ENST00000560634 ZNF781Q8N8C0 355 aa13.04□□□□□ -0.32
CSPG4P11-201ENST00000560634 UFD1Q92890 307 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms