RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 EIF2B3Q9NR50 452 aaKnown RBP12.72□□□□□ -0.37
CTDSPL2-209ENST00000560620 BFARQ9NZS9 450 aa12.72□□□□□ -0.37
CTDSPL2-209ENST00000560620 ANAPC5Q9UJX4 755 aa12.72□□□□□ -0.37
CTDSPL2-209ENST00000560620 ANKRD11Q6UB99 2663 aaPredicted RBP12.72□□□□□ -0.37
CTDSPL2-209ENST00000560620 CELSR3Q9NYQ7 3312 aa12.72□□□□□ -0.37
CTDSPL2-209ENST00000560620 PRAMEF33A0A0G2JMD5 474 aa12.71□□□□□ -0.37
CTDSPL2-209ENST00000560620 CCDC162PA2VCL2 907 aa12.71□□□□□ -0.37
CTDSPL2-209ENST00000560620 CDRT15L2A8MXV6 281 aa12.71□□□□□ -0.37
CTDSPL2-209ENST00000560620 AP3B1O00203 1094 aa12.71□□□□□ -0.37
CTDSPL2-209ENST00000560620 RASSF9O75901 435 aa12.71□□□□□ -0.37
CTDSPL2-209ENST00000560620 GOT2P00505 430 aaKnown RBP12.71□□□□□ -0.37
CTDSPL2-209ENST00000560620 KRT14P02533 472 aa12.71□□□□□ -0.37
CTDSPL2-209ENST00000560620 THRAP10827 490 aa12.71□□□□□ -0.37
CTDSPL2-209ENST00000560620 CCL4P13236 92 aa12.71□□□□□ -0.37
CTDSPL2-209ENST00000560620 PRLHRP49683 370 aa12.71□□□□□ -0.37
CTDSPL2-209ENST00000560620 CRADDP78560 199 aa12.71□□□□□ -0.37
CTDSPL2-209ENST00000560620 SARNPP82979 210 aaKnown RBP12.71□□□□□ -0.37
CTDSPL2-209ENST00000560620 CFHR1Q03591 330 aa12.71□□□□□ -0.37
CTDSPL2-209ENST00000560620 SQSTM1Q13501 440 aa12.71□□□□□ -0.37
CTDSPL2-209ENST00000560620 RPE65Q16518 533 aa12.71□□□□□ -0.37
CTDSPL2-209ENST00000560620 BCL7AQ4VC05 210 aa12.71□□□□□ -0.37
CTDSPL2-209ENST00000560620 FASTKD1Q53R41 847 aaKnown RBP12.71□□□□□ -0.37
CTDSPL2-209ENST00000560620 METRNLQ641Q3 311 aa12.71□□□□□ -0.37
CTDSPL2-209ENST00000560620 CCDC137Q6PK04 289 aaKnown RBP12.71□□□□□ -0.37
CTDSPL2-209ENST00000560620 WDR74Q6RFH5 385 aaPredicted RBP12.71□□□□□ -0.37
CTDSPL2-209ENST00000560620 IGF2-ASQ6U949 168 aa12.71□□□□□ -0.37
CTDSPL2-209ENST00000560620 AFTPHQ6ULP2 937 aa12.71□□□□□ -0.37
CTDSPL2-209ENST00000560620 NLRP9Q7RTR0 991 aa12.71□□□□□ -0.37
CTDSPL2-209ENST00000560620 PLXDC1Q8IUK5 500 aa12.71□□□□□ -0.37
CTDSPL2-209ENST00000560620 PIANPQ8IYJ0 282 aa12.71□□□□□ -0.37
CTDSPL2-209ENST00000560620 CLDN19Q8N6F1 224 aa12.71□□□□□ -0.37
CTDSPL2-209ENST00000560620 COG1Q8WTW3 980 aa12.71□□□□□ -0.37
CTDSPL2-209ENST00000560620 USP7Q93009 1102 aa12.71□□□□□ -0.37
CTDSPL2-209ENST00000560620 ZNF778Q96MU6 729 aa12.71□□□□□ -0.37
CTDSPL2-209ENST00000560620 TGM7Q96PF1 710 aa12.71□□□□□ -0.37
CTDSPL2-209ENST00000560620 RANBP9Q96S59 729 aa12.71□□□□□ -0.37
CTDSPL2-209ENST00000560620 CCM2Q9BSQ5 444 aa12.71□□□□□ -0.37
CTDSPL2-209ENST00000560620 SLC40A1Q9NP59 571 aa12.71□□□□□ -0.37
CTDSPL2-209ENST00000560620 CHRAC1Q9NRG0 131 aa12.71□□□□□ -0.37
CTDSPL2-209ENST00000560620 SLC2A6Q9UGQ3 507 aa12.71□□□□□ -0.37
CTDSPL2-209ENST00000560620 ACSL5Q9ULC5 683 aa12.71□□□□□ -0.37
CTDSPL2-209ENST00000560620 SNX12Q9UMY4 172 aa12.71□□□□□ -0.37
CTDSPL2-209ENST00000560620 TCAF1Q9Y4C2 921 aa12.71□□□□□ -0.37
CTDSPL2-209ENST00000560620 TRBV5-4A0A0C4DH59 114 aa12.7□□□□□ -0.38
CTDSPL2-209ENST00000560620 PRR19A6NJB7 356 aa12.7□□□□□ -0.38
CTDSPL2-209ENST00000560620 USP27XA6NNY8 438 aa12.7□□□□□ -0.38
CTDSPL2-209ENST00000560620 EFCAB7A8K855 629 aa12.7□□□□□ -0.38
CTDSPL2-209ENST00000560620 IFRD1O00458 451 aaPredicted RBP12.7□□□□□ -0.38
CTDSPL2-209ENST00000560620 ZNF185O15231 689 aa12.7□□□□□ -0.38
CTDSPL2-209ENST00000560620 PRAMEF10O60809 474 aa12.7□□□□□ -0.38
CTDSPL2-209ENST00000560620 PPARGP37231 505 aaPredicted RBP12.7□□□□□ -0.38
CTDSPL2-209ENST00000560620 COILP38432 576 aaPredicted RBP12.7□□□□□ -0.38
CTDSPL2-209ENST00000560620 ETV5P41161 510 aa12.7□□□□□ -0.38
CTDSPL2-209ENST00000560620 NPY2RP49146 381 aa12.7□□□□□ -0.38
CTDSPL2-209ENST00000560620 GNG11P61952 73 aa12.7□□□□□ -0.38
CTDSPL2-209ENST00000560620 BRD3Q15059 726 aa12.7□□□□□ -0.38
CTDSPL2-209ENST00000560620 DBN1Q16643 649 aa12.7□□□□□ -0.38
CTDSPL2-209ENST00000560620 PCID2Q5JVF3 399 aa12.7□□□□□ -0.38
CTDSPL2-209ENST00000560620 LYPLAL1Q5VWZ2 237 aa12.7□□□□□ -0.38
CTDSPL2-209ENST00000560620 IRGCQ6NXR0 463 aa12.7□□□□□ -0.38
CTDSPL2-209ENST00000560620 TTC27Q6P3X3 843 aa12.7□□□□□ -0.38
CTDSPL2-209ENST00000560620 CASC4Q6P4E1 433 aa12.7□□□□□ -0.38
CTDSPL2-209ENST00000560620 SPACA3Q8IXA5 215 aa12.7□□□□□ -0.38
CTDSPL2-209ENST00000560620 OTUD6BQ8N6M0 293 aa12.7□□□□□ -0.38
CTDSPL2-209ENST00000560620 OR13J1Q8NGT2 312 aa12.7□□□□□ -0.38
CTDSPL2-209ENST00000560620 OR4L1Q8NH43 312 aa12.7□□□□□ -0.38
CTDSPL2-209ENST00000560620 HM13Q8TCT9 377 aa12.7□□□□□ -0.38
CTDSPL2-209ENST00000560620 JPH3Q8WXH2 748 aaPredicted RBP12.7□□□□□ -0.38
CTDSPL2-209ENST00000560620 ART4Q93070 314 aa12.7□□□□□ -0.38
CTDSPL2-209ENST00000560620 PDLIM2Q96JY6 352 aa12.7□□□□□ -0.38
CTDSPL2-209ENST00000560620 IL22Q9GZX6 179 aa12.7□□□□□ -0.38
CTDSPL2-209ENST00000560620 UCK1Q9HA47 277 aa12.7□□□□□ -0.38
CTDSPL2-209ENST00000560620 SLC39A1Q9NY26 324 aa12.7□□□□□ -0.38
CTDSPL2-209ENST00000560620 ADAMTS20P59510 1910 aa12.69□□□□□ -0.38
CTDSPL2-209ENST00000560620 IGLV3-16A0A075B6K0 115 aa12.69□□□□□ -0.38
CTDSPL2-209ENST00000560620 F8W8V4 182 aa12.69□□□□□ -0.38
CTDSPL2-209ENST00000560620 QSOX1O00391 747 aa12.69□□□□□ -0.38
CTDSPL2-209ENST00000560620 NVLO15381 856 aaKnown RBP12.69□□□□□ -0.38
CTDSPL2-209ENST00000560620 CAPN5O15484 640 aaPredicted RBP12.69□□□□□ -0.38
CTDSPL2-209ENST00000560620 SGTAO43765 313 aa12.69□□□□□ -0.38
CTDSPL2-209ENST00000560620 FTH1P02794 183 aa12.69□□□□□ -0.38
CTDSPL2-209ENST00000560620 MTHFD1P11586 935 aaKnown RBP12.69□□□□□ -0.38
CTDSPL2-209ENST00000560620 TCP1P17987 556 aaKnown RBP12.69□□□□□ -0.38
CTDSPL2-209ENST00000560620 MGAT1P26572 445 aa12.69□□□□□ -0.38
CTDSPL2-209ENST00000560620 NSG1P42857 185 aa12.69□□□□□ -0.38
CTDSPL2-209ENST00000560620 GFERP55789 205 aa12.69□□□□□ -0.38
CTDSPL2-209ENST00000560620 CDK16Q00536 496 aa12.69□□□□□ -0.38
CTDSPL2-209ENST00000560620 SYTL3Q4VX76 610 aa12.69□□□□□ -0.38
CTDSPL2-209ENST00000560620 AARS2Q5JTZ9 985 aaKnown RBP12.69□□□□□ -0.38
CTDSPL2-209ENST00000560620 DUS1LQ6P1R4 473 aaKnown RBP12.69□□□□□ -0.38
CTDSPL2-209ENST00000560620 KLHL35Q6PF15 583 aa12.69□□□□□ -0.38
CTDSPL2-209ENST00000560620 CLEC14AQ86T13 490 aa12.69□□□□□ -0.38
CTDSPL2-209ENST00000560620 LILRA3Q8N6C8 439 aaPredicted RBP12.69□□□□□ -0.38
CTDSPL2-209ENST00000560620 SPDYE1Q8NFV5 336 aaPredicted RBP12.69□□□□□ -0.38
CTDSPL2-209ENST00000560620 GPR150Q8NGU9 434 aa12.69□□□□□ -0.38
CTDSPL2-209ENST00000560620 ACTRT1Q8TDG2 376 aa12.69□□□□□ -0.38
CTDSPL2-209ENST00000560620 GRK7Q8WTQ7 553 aa12.69□□□□□ -0.38
CTDSPL2-209ENST00000560620 CRELD1Q96HD1 420 aa12.69□□□□□ -0.38
CTDSPL2-209ENST00000560620 CAPZA3Q96KX2 299 aa12.69□□□□□ -0.38
CTDSPL2-209ENST00000560620 LINC00615Q96LM1 132 aaPredicted RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms