RNA–Protein interactions for RNA: ENST00000560316.1

HERC1-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-207ENST00000560316 ZRSR2Q15696 482 aaKnown RBP16.19■□□□□ 0.18
HERC1-207ENST00000560316 IFI16Q16666 785 aaKnown RBP16.19■□□□□ 0.18
HERC1-207ENST00000560316 FAM83HQ6ZRV2 1179 aaPredicted RBP16.19■□□□□ 0.18
HERC1-207ENST00000560316 CUZD1Q86UP6 607 aa16.19■□□□□ 0.18
HERC1-207ENST00000560316 ST6GALNAC3Q8NDV1 305 aa16.19■□□□□ 0.18
HERC1-207ENST00000560316 BTBD6Q96KE9 485 aa16.19■□□□□ 0.18
HERC1-207ENST00000560316 ERGIC2Q96RQ1 377 aa16.19■□□□□ 0.18
HERC1-207ENST00000560316 RAD18Q9NS91 495 aa16.19■□□□□ 0.18
HERC1-207ENST00000560316 HAUS2Q9NVX0 235 aa16.19■□□□□ 0.18
HERC1-207ENST00000560316 NFKBIL1Q9UBC1 381 aaPredicted RBP16.19■□□□□ 0.18
HERC1-207ENST00000560316 OSGIN2Q9Y236 505 aa16.19■□□□□ 0.18
HERC1-207ENST00000560316 ZNF711Q9Y462 761 aa16.19■□□□□ 0.18
HERC1-207ENST00000560316 PCDHGA10Q9Y5H3 936 aa16.19■□□□□ 0.18
HERC1-207ENST00000560316 CSMD2Q7Z408 3487 aa16.19■□□□□ 0.18
HERC1-207ENST00000560316 OR6C74A6NCV1 312 aa16.18■□□□□ 0.18
HERC1-207ENST00000560316 MASP2O00187 686 aa16.18■□□□□ 0.18
HERC1-207ENST00000560316 ZG16O60844 167 aa16.18■□□□□ 0.18
HERC1-207ENST00000560316 GTF2H3Q13889 308 aa16.18■□□□□ 0.18
HERC1-207ENST00000560316 NCF4Q15080 339 aa16.18■□□□□ 0.18
HERC1-207ENST00000560316 PAFAH1B3Q15102 231 aaKnown RBP16.18■□□□□ 0.18
HERC1-207ENST00000560316 ATP13A5Q4VNC0 1218 aa16.18■□□□□ 0.18
HERC1-207ENST00000560316 DUS1LQ6P1R4 473 aaKnown RBP16.18■□□□□ 0.18
HERC1-207ENST00000560316 IGFL3Q6UXB1 125 aa16.18■□□□□ 0.18
HERC1-207ENST00000560316 ZNF571Q7Z3V5 609 aaPredicted RBP16.18■□□□□ 0.18
HERC1-207ENST00000560316 MRGPREQ86SM8 312 aa16.18■□□□□ 0.18
HERC1-207ENST00000560316 OOSP2Q86WS3 158 aa16.18■□□□□ 0.18
HERC1-207ENST00000560316 RAB43Q86YS6 212 aa16.18■□□□□ 0.18
HERC1-207ENST00000560316 GALNT16Q8N428 558 aa16.18■□□□□ 0.18
HERC1-207ENST00000560316 OR1L3Q8NH93 324 aa16.18■□□□□ 0.18
HERC1-207ENST00000560316 GDAP1Q8TB36 358 aa16.18■□□□□ 0.18
HERC1-207ENST00000560316 FATE1Q969F0 183 aa16.18■□□□□ 0.18
HERC1-207ENST00000560316 TSGA13Q96PP4 275 aa16.18■□□□□ 0.18
HERC1-207ENST00000560316 GPR63Q9BZJ6 419 aa16.18■□□□□ 0.18
HERC1-207ENST00000560316 HAUS4Q9H6D7 363 aa16.18■□□□□ 0.18
HERC1-207ENST00000560316 ZNF552Q9H707 407 aaPredicted RBP16.18■□□□□ 0.18
HERC1-207ENST00000560316 ACTR5Q9H9F9 607 aaPredicted RBP16.18■□□□□ 0.18
HERC1-207ENST00000560316 ZBTB20Q9HC78 741 aaPredicted RBP16.18■□□□□ 0.18
HERC1-207ENST00000560316 MRPL47Q9HD33 250 aaKnown RBP16.18■□□□□ 0.18
HERC1-207ENST00000560316 IMP3Q9NV31 184 aaKnown RBP16.18■□□□□ 0.18
HERC1-207ENST00000560316 TMEM63CQ9P1W3 806 aa16.18■□□□□ 0.18
HERC1-207ENST00000560316 BTRCQ9Y297 605 aa16.18■□□□□ 0.18
HERC1-207ENST00000560316 AKAP9Q99996 3911 aa16.17■□□□□ 0.18
HERC1-207ENST00000560316 TMEM150CB9EJG8 249 aa16.17■□□□□ 0.18
HERC1-207ENST00000560316 PRSS44E7EML9 344 aa16.17■□□□□ 0.18
HERC1-207ENST00000560316 DDX3XO00571 662 aaKnown RBP eCLIP16.17■□□□□ 0.184e-9■□□□□ 9.5
HERC1-207ENST00000560316 POP7O75817 140 aaKnown RBP16.17■□□□□ 0.18
HERC1-207ENST00000560316 ALPPP05187 535 aa16.17■□□□□ 0.18
HERC1-207ENST00000560316 GZMAP12544 262 aa16.17■□□□□ 0.18
HERC1-207ENST00000560316 PER3P56645 1201 aa16.17■□□□□ 0.18
HERC1-207ENST00000560316 NFE2L1Q14494 772 aa16.17■□□□□ 0.18
HERC1-207ENST00000560316 MYBPC3Q14896 1274 aa16.17■□□□□ 0.18
HERC1-207ENST00000560316 ANO6Q4KMQ2 910 aa16.17■□□□□ 0.18
HERC1-207ENST00000560316 ZNF789Q5FWF6 425 aa16.17■□□□□ 0.18
HERC1-207ENST00000560316 ARMC6Q6NXE6 501 aa16.17■□□□□ 0.18
HERC1-207ENST00000560316 SPOCD1Q6ZMY3 1216 aa16.17■□□□□ 0.18
HERC1-207ENST00000560316 ZC3H18Q86VM9 953 aaKnown RBP16.17■□□□□ 0.18
HERC1-207ENST00000560316 AMZ2Q86W34 360 aa16.17■□□□□ 0.18
HERC1-207ENST00000560316 ZADH2Q8N4Q0 377 aa16.17■□□□□ 0.18
HERC1-207ENST00000560316 TRIB3Q96RU7 358 aa16.17■□□□□ 0.18
HERC1-207ENST00000560316 NUP62CLQ9H1M0 184 aa16.17■□□□□ 0.18
HERC1-207ENST00000560316 FANCEQ9HB96 536 aa16.17■□□□□ 0.18
HERC1-207ENST00000560316 MAGEE1Q9HCI5 957 aa16.17■□□□□ 0.18
HERC1-207ENST00000560316 BPIFA1Q9NP55 256 aa16.17■□□□□ 0.18
HERC1-207ENST00000560316 AGPAT4Q9NRZ5 378 aa16.17■□□□□ 0.18
HERC1-207ENST00000560316 LIMA1Q9UHB6 759 aaKnown RBP16.17■□□□□ 0.18
HERC1-207ENST00000560316 SETD2Q9BYW2 2564 aaPredicted RBP16.17■□□□□ 0.18
HERC1-207ENST00000560316 SEC16AO15027 2179 aa16.16■□□□□ 0.18
HERC1-207ENST00000560316 SLC9B1P1A6NJY1 282 aa16.16■□□□□ 0.18
HERC1-207ENST00000560316 KCNK1O00180 336 aa16.16■□□□□ 0.18
HERC1-207ENST00000560316 AURKAO14965 403 aa16.16■□□□□ 0.18
HERC1-207ENST00000560316 ATXN8OSP0DMR3 200 aa16.16■□□□□ 0.18
HERC1-207ENST00000560316 MTHFD1P11586 935 aaKnown RBP16.16■□□□□ 0.18
HERC1-207ENST00000560316 CYP2A7P20853 494 aa16.16■□□□□ 0.18
HERC1-207ENST00000560316 PBLDP30039 288 aaPredicted RBP16.16■□□□□ 0.18
HERC1-207ENST00000560316 CTSCP53634 463 aa16.16■□□□□ 0.18
HERC1-207ENST00000560316 GBE1Q04446 702 aa16.16■□□□□ 0.18
HERC1-207ENST00000560316 DMPKQ09013 629 aa16.16■□□□□ 0.18
HERC1-207ENST00000560316 XRCC4Q13426 336 aa16.16■□□□□ 0.18
HERC1-207ENST00000560316 DPYSL3Q14195 570 aa16.16■□□□□ 0.18
HERC1-207ENST00000560316 PIGHQ14442 188 aaPredicted RBP16.16■□□□□ 0.18
HERC1-207ENST00000560316 DCAF10Q5QP82 559 aa16.16■□□□□ 0.18
HERC1-207ENST00000560316 Q6ZS92 163 aa16.16■□□□□ 0.18
HERC1-207ENST00000560316 KCNMB4Q86W47 210 aa16.16■□□□□ 0.18
HERC1-207ENST00000560316 CNTD1Q8N815 330 aa16.16■□□□□ 0.18
HERC1-207ENST00000560316 CLEC1AQ8NC01 280 aa16.16■□□□□ 0.18
HERC1-207ENST00000560316 CCNYQ8ND76 341 aa16.16■□□□□ 0.18
HERC1-207ENST00000560316 FAM71BQ8TC56 605 aa16.16■□□□□ 0.18
HERC1-207ENST00000560316 TTC25Q96NG3 672 aa16.16■□□□□ 0.18
HERC1-207ENST00000560316 VPS35Q96QK1 796 aa16.16■□□□□ 0.18
HERC1-207ENST00000560316 CSAG2Q9Y5P2 127 aa16.16■□□□□ 0.18
HERC1-207ENST00000560316 ZFHX3Q15911 3703 aa16.15■□□□□ 0.18
HERC1-207ENST00000560316 LRRC53A6NM62 1247 aa16.15■□□□□ 0.18
HERC1-207ENST00000560316 C9J4A7 227 aa16.15■□□□□ 0.18
HERC1-207ENST00000560316 LDB2O43679 373 aa16.15■□□□□ 0.18
HERC1-207ENST00000560316 KCNJ13O60928 360 aa16.15■□□□□ 0.18
HERC1-207ENST00000560316 KLF7O75840 302 aaPredicted RBP16.15■□□□□ 0.18
HERC1-207ENST00000560316 POLR2CP19387 275 aaPredicted RBP16.15■□□□□ 0.18
HERC1-207ENST00000560316 CDH3P22223 829 aa16.15■□□□□ 0.18
HERC1-207ENST00000560316 GJC1P36383 396 aa16.15■□□□□ 0.18
HERC1-207ENST00000560316 SSR1P43307 286 aaKnown RBP16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms