RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 PCMTD2Q9NV79 361 aa12.5□□□□□ -0.41
RABGGTA-213ENST00000560127 PARVAQ9NVD7 372 aa12.5□□□□□ -0.41
RABGGTA-213ENST00000560127 COPG2Q9UBF2 871 aa12.5□□□□□ -0.41
RABGGTA-213ENST00000560127 RPL26L1Q9UNX3 145 aaKnown RBP12.5□□□□□ -0.41
RABGGTA-213ENST00000560127 CSAG2Q9Y5P2 127 aa12.5□□□□□ -0.41
RABGGTA-213ENST00000560127 NCOA6Q14686 2063 aaPredicted RBP12.5□□□□□ -0.41
RABGGTA-213ENST00000560127 ZNF469Q96JG9 3925 aaPredicted RBP12.5□□□□□ -0.41
RABGGTA-213ENST00000560127 OR5K3A6NET4 321 aa12.49□□□□□ -0.41
RABGGTA-213ENST00000560127 DDX3YO15523 660 aaKnown RBP12.49□□□□□ -0.41
RABGGTA-213ENST00000560127 CES1P23141 567 aa12.49□□□□□ -0.41
RABGGTA-213ENST00000560127 ARL4AP40617 200 aa12.49□□□□□ -0.41
RABGGTA-213ENST00000560127 SMTNL2Q2TAL5 461 aa12.49□□□□□ -0.41
RABGGTA-213ENST00000560127 PTCHD3Q3KNS1 767 aa12.49□□□□□ -0.41
RABGGTA-213ENST00000560127 ZNF789Q5FWF6 425 aa12.49□□□□□ -0.41
RABGGTA-213ENST00000560127 DCAF10Q5QP82 559 aa12.49□□□□□ -0.41
RABGGTA-213ENST00000560127 TMTC4Q5T4D3 741 aa12.49□□□□□ -0.41
RABGGTA-213ENST00000560127 KLHL35Q6PF15 583 aa12.49□□□□□ -0.41
RABGGTA-213ENST00000560127 FBXO38Q6PIJ6 1188 aa12.49□□□□□ -0.41
RABGGTA-213ENST00000560127 FJX1Q86VR8 437 aa12.49□□□□□ -0.41
RABGGTA-213ENST00000560127 TRAM1L1Q8N609 369 aa12.49□□□□□ -0.41
RABGGTA-213ENST00000560127 MAML1Q92585 1016 aa12.49□□□□□ -0.41
RABGGTA-213ENST00000560127 ZSCAN5AQ9BUG6 496 aa12.49□□□□□ -0.41
RABGGTA-213ENST00000560127 NUP85Q9BW27 656 aa12.49□□□□□ -0.41
RABGGTA-213ENST00000560127 HRASLS2Q9NWW9 162 aa12.49□□□□□ -0.41
RABGGTA-213ENST00000560127 BTRCQ9Y297 605 aa12.49□□□□□ -0.41
RABGGTA-213ENST00000560127 LGALS16A8MUM7 142 aa12.48□□□□□ -0.41
RABGGTA-213ENST00000560127 ANKRD66B4E2M5 251 aa12.48□□□□□ -0.41
RABGGTA-213ENST00000560127 MASP2O00187 686 aa12.48□□□□□ -0.41
RABGGTA-213ENST00000560127 VEGFDO43915 354 aa12.48□□□□□ -0.41
RABGGTA-213ENST00000560127 KLF7O75840 302 aaPredicted RBP12.48□□□□□ -0.41
RABGGTA-213ENST00000560127 CDK14O94921 469 aa12.48□□□□□ -0.41
RABGGTA-213ENST00000560127 STSP08842 583 aa12.48□□□□□ -0.41
RABGGTA-213ENST00000560127 EDN3P14138 238 aa12.48□□□□□ -0.41
RABGGTA-213ENST00000560127 TCF4P15884 667 aa12.48□□□□□ -0.41
RABGGTA-213ENST00000560127 CA4P22748 312 aa12.48□□□□□ -0.41
RABGGTA-213ENST00000560127 PTGER4P35408 488 aa12.48□□□□□ -0.41
RABGGTA-213ENST00000560127 HALP42357 657 aa12.48□□□□□ -0.41
RABGGTA-213ENST00000560127 KPNA2P52292 529 aaKnown RBP12.48□□□□□ -0.41
RABGGTA-213ENST00000560127 DCDC1P59894 354 aa12.48□□□□□ -0.41
RABGGTA-213ENST00000560127 ART3Q13508 389 aa12.48□□□□□ -0.41
RABGGTA-213ENST00000560127 PLCL1Q15111 1095 aa12.48□□□□□ -0.41
RABGGTA-213ENST00000560127 TESK1Q15569 626 aa12.48□□□□□ -0.41
RABGGTA-213ENST00000560127 RPE65Q16518 533 aa12.48□□□□□ -0.41
RABGGTA-213ENST00000560127 OR1L3Q8NH93 324 aa12.48□□□□□ -0.41
RABGGTA-213ENST00000560127 GRHL3Q8TE85 626 aa12.48□□□□□ -0.41
RABGGTA-213ENST00000560127 TM9SF4Q92544 642 aa12.48□□□□□ -0.41
RABGGTA-213ENST00000560127 POM121Q96HA1 1249 aa12.48□□□□□ -0.41
RABGGTA-213ENST00000560127 FER1L6-AS2Q96M78 137 aa12.48□□□□□ -0.41
RABGGTA-213ENST00000560127 TLR10Q9BXR5 811 aa12.48□□□□□ -0.41
RABGGTA-213ENST00000560127 ACTR5Q9H9F9 607 aaPredicted RBP12.48□□□□□ -0.41
RABGGTA-213ENST00000560127 CBX8Q9HC52 389 aa12.48□□□□□ -0.41
RABGGTA-213ENST00000560127 RBM22Q9NW64 420 aaKnown RBP eCLIP12.48□□□□□ -0.41
RABGGTA-213ENST00000560127 NFKBIL1Q9UBC1 381 aaPredicted RBP12.48□□□□□ -0.41
RABGGTA-213ENST00000560127 TMPRSS11EQ9UL52 423 aa12.48□□□□□ -0.41
RABGGTA-213ENST00000560127 TTLL3Q9Y4R7 772 aa12.48□□□□□ -0.41
RABGGTA-213ENST00000560127 GTF3C1Q12789 2109 aa12.47□□□□□ -0.41
RABGGTA-213ENST00000560127 FBN3Q75N90 2809 aa12.47□□□□□ -0.41
RABGGTA-213ENST00000560127 A0A1B0GUH1 482 aa12.47□□□□□ -0.41
RABGGTA-213ENST00000560127 LRRC10BA6NIK2 292 aa12.47□□□□□ -0.41
RABGGTA-213ENST00000560127 TMCO5BA8MYB1 307 aa12.47□□□□□ -0.41
RABGGTA-213ENST00000560127 IPO13O94829 963 aaKnown RBP12.47□□□□□ -0.41
RABGGTA-213ENST00000560127 HLA-DQB2P05538 268 aa12.47□□□□□ -0.41
RABGGTA-213ENST00000560127 MMP2P08253 660 aa12.47□□□□□ -0.41
RABGGTA-213ENST00000560127 SERPINB6P35237 376 aa12.47□□□□□ -0.41
RABGGTA-213ENST00000560127 SOX8P57073 446 aa12.47□□□□□ -0.41
RABGGTA-213ENST00000560127 NFKBIBQ15653 356 aa12.47□□□□□ -0.41
RABGGTA-213ENST00000560127 ZNF385CQ66K41 422 aaPredicted RBP12.47□□□□□ -0.41
RABGGTA-213ENST00000560127 PDPK2PQ6A1A2 396 aa12.47□□□□□ -0.41
RABGGTA-213ENST00000560127 TRAPPC5Q8IUR0 188 aa12.47□□□□□ -0.41
RABGGTA-213ENST00000560127 LRRC49Q8IUZ0 686 aa12.47□□□□□ -0.41
RABGGTA-213ENST00000560127 CLEC1AQ8NC01 280 aa12.47□□□□□ -0.41
RABGGTA-213ENST00000560127 FAR1Q8WVX9 515 aa12.47□□□□□ -0.41
RABGGTA-213ENST00000560127 HSPH1Q92598 858 aa12.47□□□□□ -0.41
RABGGTA-213ENST00000560127 ZNF653Q96CK0 615 aa12.47□□□□□ -0.41
RABGGTA-213ENST00000560127 IP6K3Q96PC2 410 aa12.47□□□□□ -0.41
RABGGTA-213ENST00000560127 WDR77Q9BQA1 342 aaPredicted RBP12.47□□□□□ -0.41
RABGGTA-213ENST00000560127 ZFYVE1Q9HBF4 777 aa12.47□□□□□ -0.41
RABGGTA-213ENST00000560127 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.47□□□□□ -0.41
RABGGTA-213ENST00000560127 SOHLH2Q9NX45 425 aa12.47□□□□□ -0.41
RABGGTA-213ENST00000560127 NOVA2Q9UNW9 492 aaKnown RBP12.47□□□□□ -0.41
RABGGTA-213ENST00000560127 KLF2Q9Y5W3 355 aaPredicted RBP12.47□□□□□ -0.41
RABGGTA-213ENST00000560127 SLC9B1P1A6NJY1 282 aa12.46□□□□□ -0.41
RABGGTA-213ENST00000560127 TMEM150CB9EJG8 249 aa12.46□□□□□ -0.41
RABGGTA-213ENST00000560127 MATN3O15232 486 aa12.46□□□□□ -0.41
RABGGTA-213ENST00000560127 MFSD11O43934 449 aa12.46□□□□□ -0.41
RABGGTA-213ENST00000560127 KLHL41O60662 606 aa12.46□□□□□ -0.41
RABGGTA-213ENST00000560127 SNRPB2P08579 225 aaKnown RBP12.46□□□□□ -0.41
RABGGTA-213ENST00000560127 VCLP18206 1134 aa12.46□□□□□ -0.41
RABGGTA-213ENST00000560127 PCK1P35558 622 aa12.46□□□□□ -0.41
RABGGTA-213ENST00000560127 HADHAP40939 763 aa12.46□□□□□ -0.41
RABGGTA-213ENST00000560127 TSFMP43897 325 aaKnown RBP12.46□□□□□ -0.41
RABGGTA-213ENST00000560127 ARCN1P48444 511 aaKnown RBP12.46□□□□□ -0.41
RABGGTA-213ENST00000560127 ZNF165P49910 485 aa12.46□□□□□ -0.41
RABGGTA-213ENST00000560127 GALNT2Q10471 571 aa12.46□□□□□ -0.41
RABGGTA-213ENST00000560127 SSPNQ14714 243 aa12.46□□□□□ -0.41
RABGGTA-213ENST00000560127 HIF1AQ16665 826 aa12.46□□□□□ -0.41
RABGGTA-213ENST00000560127 BOLA3Q53S33 107 aa12.46□□□□□ -0.41
RABGGTA-213ENST00000560127 TXNRD3NBQ6F5E7 133 aa12.46□□□□□ -0.41
RABGGTA-213ENST00000560127 FAM83HQ6ZRV2 1179 aaPredicted RBP12.46□□□□□ -0.41
RABGGTA-213ENST00000560127 TMC3Q7Z5M5 1100 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms