RNA–Protein interactions for RNA: ENST00000559834.1

HDDC3-204, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,076 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-204ENST00000559834 ACSL5Q9ULC5 683 aa8.97□□□□□ -0.97
HDDC3-204ENST00000559834 NENFQ9UMX5 172 aa8.97□□□□□ -0.97
HDDC3-204ENST00000559834 PSMD13Q9UNM6 376 aa8.97□□□□□ -0.97
HDDC3-204ENST00000559834 PCDHGB7Q9Y5F8 929 aa8.97□□□□□ -0.97
HDDC3-204ENST00000559834 SPO11Q9Y5K1 396 aa8.97□□□□□ -0.97
HDDC3-204ENST00000559834 COLEC10Q9Y6Z7 277 aa8.97□□□□□ -0.97
HDDC3-204ENST00000559834 GLYATL1P3A0A0U1RQE8 302 aa8.96□□□□□ -0.98
HDDC3-204ENST00000559834 OR5K3A6NET4 321 aa8.96□□□□□ -0.98
HDDC3-204ENST00000559834 MGAT4DA6NG13 374 aa8.96□□□□□ -0.98
HDDC3-204ENST00000559834 OR2AG2A6NM03 316 aa8.96□□□□□ -0.98
HDDC3-204ENST00000559834 SCRG1O75711 98 aa8.96□□□□□ -0.98
HDDC3-204ENST00000559834 DNAJB5O75953 348 aa8.96□□□□□ -0.98
HDDC3-204ENST00000559834 KRT1P04264 644 aa8.96□□□□□ -0.98
HDDC3-204ENST00000559834 EBLN1P0CF75 366 aa8.96□□□□□ -0.98
HDDC3-204ENST00000559834 MTHFD1P11586 935 aaKnown RBP8.96□□□□□ -0.98
HDDC3-204ENST00000559834 HLA-DPA1P20036 260 aa8.96□□□□□ -0.98
HDDC3-204ENST00000559834 MSH3P20585 1137 aa8.96□□□□□ -0.98
HDDC3-204ENST00000559834 LPOP22079 712 aaPredicted RBP8.96□□□□□ -0.98
HDDC3-204ENST00000559834 GSDMDP57764 484 aa8.96□□□□□ -0.98
HDDC3-204ENST00000559834 DYNLT1P63172 113 aa8.96□□□□□ -0.98
HDDC3-204ENST00000559834 PRKAA1Q13131 559 aa8.96□□□□□ -0.98
HDDC3-204ENST00000559834 NFE2L1Q14494 772 aa8.96□□□□□ -0.98
HDDC3-204ENST00000559834 KRT33BQ14525 404 aa8.96□□□□□ -0.98
HDDC3-204ENST00000559834 GSE1Q14687 1217 aa8.96□□□□□ -0.98
HDDC3-204ENST00000559834 CHRNA6Q15825 494 aa8.96□□□□□ -0.98
HDDC3-204ENST00000559834 IZUMO3Q5VZ72 239 aa8.96□□□□□ -0.98
HDDC3-204ENST00000559834 FAM199XQ6PEV8 388 aaPredicted RBP8.96□□□□□ -0.98
HDDC3-204ENST00000559834 NPNTQ6UXI9 565 aa8.96□□□□□ -0.98
HDDC3-204ENST00000559834 FAM151BQ6UXP7 276 aa8.96□□□□□ -0.98
HDDC3-204ENST00000559834 PID1Q7Z2X4 250 aa8.96□□□□□ -0.98
HDDC3-204ENST00000559834 GLT6D1Q7Z4J2 308 aa8.96□□□□□ -0.98
HDDC3-204ENST00000559834 HPS6Q86YV9 775 aa8.96□□□□□ -0.98
HDDC3-204ENST00000559834 SLC25A41Q8N5S1 370 aa8.96□□□□□ -0.98
HDDC3-204ENST00000559834 DDHD1Q8NEL9 900 aa8.96□□□□□ -0.98
HDDC3-204ENST00000559834 BLOC1S5Q8TDH9 187 aa8.96□□□□□ -0.98
HDDC3-204ENST00000559834 CPT1BQ92523 772 aa8.96□□□□□ -0.98
HDDC3-204ENST00000559834 P3H4Q92791 437 aa8.96□□□□□ -0.98
HDDC3-204ENST00000559834 LRFN5Q96NI6 719 aa8.96□□□□□ -0.98
HDDC3-204ENST00000559834 TRIM55Q9BYV6 548 aa8.96□□□□□ -0.98
HDDC3-204ENST00000559834 FANCEQ9HB96 536 aa8.96□□□□□ -0.98
HDDC3-204ENST00000559834 SYTL2Q9HCH5 934 aa8.96□□□□□ -0.98
HDDC3-204ENST00000559834 MLXIPLQ9NP71 852 aa8.96□□□□□ -0.98
HDDC3-204ENST00000559834 LATS2Q9NRM7 1088 aa8.96□□□□□ -0.98
HDDC3-204ENST00000559834 IFNKQ9P0W0 207 aa8.96□□□□□ -0.98
HDDC3-204ENST00000559834 ZNF451Q9Y4E5 1061 aa8.96□□□□□ -0.98
HDDC3-204ENST00000559834 OR6C74A6NCV1 312 aa8.95□□□□□ -0.98
HDDC3-204ENST00000559834 ARGFXA6NJG6 315 aa8.95□□□□□ -0.98
HDDC3-204ENST00000559834 MATN2O00339 956 aa8.95□□□□□ -0.98
HDDC3-204ENST00000559834 STX7O15400 261 aaKnown RBP8.95□□□□□ -0.98
HDDC3-204ENST00000559834 CST8O60676 142 aa8.95□□□□□ -0.98
HDDC3-204ENST00000559834 DPM1O60762 260 aa8.95□□□□□ -0.98
HDDC3-204ENST00000559834 TPM1P09493 284 aa8.95□□□□□ -0.98
HDDC3-204ENST00000559834 RAB40ALP0C0E4 278 aa8.95□□□□□ -0.98
HDDC3-204ENST00000559834 RALBP11234 206 aa8.95□□□□□ -0.98
HDDC3-204ENST00000559834 TNNT1P13805 278 aa8.95□□□□□ -0.98
HDDC3-204ENST00000559834 GNLYP22749 145 aa8.95□□□□□ -0.98
HDDC3-204ENST00000559834 NDUFS1P28331 727 aa8.95□□□□□ -0.98
HDDC3-204ENST00000559834 AKT1P31749 480 aa8.95□□□□□ -0.98
HDDC3-204ENST00000559834 CTSCP53634 463 aa8.95□□□□□ -0.98
HDDC3-204ENST00000559834 PPP1CAP62136 330 aa8.95□□□□□ -0.98
HDDC3-204ENST00000559834 MPP3Q13368 585 aa8.95□□□□□ -0.98
HDDC3-204ENST00000559834 TRIM14Q14142 442 aa8.95□□□□□ -0.98
HDDC3-204ENST00000559834 PRKD1Q15139 912 aaPredicted RBP8.95□□□□□ -0.98
HDDC3-204ENST00000559834 SLC1A5Q15758 541 aa8.95□□□□□ -0.98
HDDC3-204ENST00000559834 ASTE1Q2TB18 679 aaPredicted RBP8.95□□□□□ -0.98
HDDC3-204ENST00000559834 SIRPB2Q5JXA9 342 aa8.95□□□□□ -0.98
HDDC3-204ENST00000559834 FNBP1LQ5T0N5 605 aa8.95□□□□□ -0.98
HDDC3-204ENST00000559834 FAM182AQ5T1J6 154 aa8.95□□□□□ -0.98
HDDC3-204ENST00000559834 GPRC6AQ5T6X5 926 aa8.95□□□□□ -0.98
HDDC3-204ENST00000559834 PAPD7Q5XG87 772 aaKnown RBP8.95□□□□□ -0.98
HDDC3-204ENST00000559834 CAPRIN2Q6IMN6 1127 aaKnown RBP8.95□□□□□ -0.98
HDDC3-204ENST00000559834 ZNF517Q6ZMY9 492 aaPredicted RBP8.95□□□□□ -0.98
HDDC3-204ENST00000559834 FAM83HQ6ZRV2 1179 aaPredicted RBP8.95□□□□□ -0.98
HDDC3-204ENST00000559834 B4GALNT4Q76KP1 1039 aa8.95□□□□□ -0.98
HDDC3-204ENST00000559834 LURAP1LQ8IV03 231 aa8.95□□□□□ -0.98
HDDC3-204ENST00000559834 TTC30BQ8N4P2 665 aa8.95□□□□□ -0.98
HDDC3-204ENST00000559834 GPR150Q8NGU9 434 aa8.95□□□□□ -0.98
HDDC3-204ENST00000559834 OR2L2Q8NH16 312 aa8.95□□□□□ -0.98
HDDC3-204ENST00000559834 ZNF398Q8TD17 642 aa8.95□□□□□ -0.98
HDDC3-204ENST00000559834 DCUN1D1Q96GG9 259 aa8.95□□□□□ -0.98
HDDC3-204ENST00000559834 CCDC42Q96M95 316 aa8.95□□□□□ -0.98
HDDC3-204ENST00000559834 C12orf66Q96MD2 445 aa8.95□□□□□ -0.98
HDDC3-204ENST00000559834 FCRL5Q96RD9 977 aa8.95□□□□□ -0.98
HDDC3-204ENST00000559834 INSM2Q96T92 566 aaPredicted RBP8.95□□□□□ -0.98
HDDC3-204ENST00000559834 CCM2Q9BSQ5 444 aa8.95□□□□□ -0.98
HDDC3-204ENST00000559834 FSD1LQ9BXM9 530 aa8.95□□□□□ -0.98
HDDC3-204ENST00000559834 WWP1Q9H0M0 922 aa8.95□□□□□ -0.98
HDDC3-204ENST00000559834 KIR3DX1Q9H7L2 352 aa8.95□□□□□ -0.98
HDDC3-204ENST00000559834 AKIRIN1Q9H9L7 192 aaPredicted RBP8.95□□□□□ -0.98
HDDC3-204ENST00000559834 CUEDC1Q9NWM3 386 aaPredicted RBP8.95□□□□□ -0.98
HDDC3-204ENST00000559834 SOHLH2Q9NX45 425 aa8.95□□□□□ -0.98
HDDC3-204ENST00000559834 KLHL8Q9P2G9 620 aaPredicted RBP8.95□□□□□ -0.98
HDDC3-204ENST00000559834 SLC24A2Q9UI40 661 aa8.95□□□□□ -0.98
HDDC3-204ENST00000559834 SERTAD3Q9UJW9 196 aa8.95□□□□□ -0.98
HDDC3-204ENST00000559834 TRHDEQ9UKU6 1024 aa8.95□□□□□ -0.98
HDDC3-204ENST00000559834 SNX7Q9UNH6 387 aa8.95□□□□□ -0.98
HDDC3-204ENST00000559834 MAP4K5Q9Y4K4 846 aa8.95□□□□□ -0.98
HDDC3-204ENST00000559834 HEBP2Q9Y5Z4 205 aa8.95□□□□□ -0.98
HDDC3-204ENST00000559834 UBR5O95071 2799 aaPredicted RBP8.94□□□□□ -0.98
HDDC3-204ENST00000559834 SYCE3A1L190 88 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms