RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 CCDC103Q8IW40 242 aa10.53□□□□□ -0.72
CARMIL3-202ENST00000559694 FAM3CQ92520 227 aa10.53□□□□□ -0.72
CARMIL3-202ENST00000559694 NLNQ9BYT8 704 aa10.53□□□□□ -0.72
CARMIL3-202ENST00000559694 DPY30Q9C005 99 aa10.53□□□□□ -0.72
CARMIL3-202ENST00000559694 CRISPLD1Q9H336 500 aa10.53□□□□□ -0.72
CARMIL3-202ENST00000559694 OSER1Q9NX31 292 aa10.53□□□□□ -0.72
CARMIL3-202ENST00000559694 SLC2A6Q9UGQ3 507 aa10.53□□□□□ -0.72
CARMIL3-202ENST00000559694 POLG2Q9UHN1 485 aa10.53□□□□□ -0.72
CARMIL3-202ENST00000559694 ACP5P13686 325 aa10.53□□□□□ -0.72
CARMIL3-202ENST00000559694 TNNI3P19429 210 aa10.53□□□□□ -0.72
CARMIL3-202ENST00000559694 PRIM2P49643 509 aa10.53□□□□□ -0.72
CARMIL3-202ENST00000559694 LIMK2P53671 638 aa10.53□□□□□ -0.72
CARMIL3-202ENST00000559694 KLF1Q13351 362 aaPredicted RBP10.53□□□□□ -0.72
CARMIL3-202ENST00000559694 NAE1Q13564 534 aa10.53□□□□□ -0.72
CARMIL3-202ENST00000559694 GPR33Q49SQ1 333 aa10.53□□□□□ -0.72
CARMIL3-202ENST00000559694 USP39Q53GS9 565 aaKnown RBP10.53□□□□□ -0.72
CARMIL3-202ENST00000559694 FAM78AQ5JUQ0 283 aa10.53□□□□□ -0.72
CARMIL3-202ENST00000559694 AMZ2Q86W34 360 aa10.53□□□□□ -0.72
CARMIL3-202ENST00000559694 HOMEZQ8IX15 550 aa10.53□□□□□ -0.72
CARMIL3-202ENST00000559694 FAM9CQ8IZT9 166 aa10.53□□□□□ -0.72
CARMIL3-202ENST00000559694 DEFB123Q8N688 67 aa10.53□□□□□ -0.72
CARMIL3-202ENST00000559694 DLG3Q92796 817 aa10.53□□□□□ -0.72
CARMIL3-202ENST00000559694 USP29Q9HBJ7 922 aa10.53□□□□□ -0.72
CARMIL3-202ENST00000559694 ZC4H2Q9NQZ6 224 aa10.53□□□□□ -0.72
CARMIL3-202ENST00000559694 ATAD3AQ9NVI7 634 aa10.53□□□□□ -0.72
CARMIL3-202ENST00000559694 SATB2Q9UPW6 733 aa10.53□□□□□ -0.72
CARMIL3-202ENST00000559694 KANSL1LA0AUZ9 987 aa10.52□□□□□ -0.72
CARMIL3-202ENST00000559694 NPEPPSL1A6NEC2 478 aa10.52□□□□□ -0.72
CARMIL3-202ENST00000559694 CBFA2T3O75081 653 aa10.52□□□□□ -0.72
CARMIL3-202ENST00000559694 ULK1O75385 1050 aa10.52□□□□□ -0.72
CARMIL3-202ENST00000559694 TGDSO95455 350 aa10.52□□□□□ -0.72
CARMIL3-202ENST00000559694 F7P08709 466 aaPredicted RBP10.52□□□□□ -0.72
CARMIL3-202ENST00000559694 PFKLP17858 780 aa10.52□□□□□ -0.72
CARMIL3-202ENST00000559694 RPIAP49247 311 aa10.52□□□□□ -0.72
CARMIL3-202ENST00000559694 SLC7A9P82251 487 aa10.52□□□□□ -0.72
CARMIL3-202ENST00000559694 FUT11Q495W5 492 aa10.52□□□□□ -0.72
CARMIL3-202ENST00000559694 KLHL35Q6PF15 583 aa10.52□□□□□ -0.72
CARMIL3-202ENST00000559694 ERN2Q76MJ5 926 aaKnown RBP10.52□□□□□ -0.72
CARMIL3-202ENST00000559694 PIWIL4Q7Z3Z4 852 aaKnown RBP10.52□□□□□ -0.72
CARMIL3-202ENST00000559694 KRT78Q8N1N4 520 aa10.52□□□□□ -0.72
CARMIL3-202ENST00000559694 ARFGAP1Q8N6T3 406 aa10.52□□□□□ -0.72
CARMIL3-202ENST00000559694 SCAMP4Q969E2 229 aa10.52□□□□□ -0.72
CARMIL3-202ENST00000559694 MAGED4Q96JG8 741 aa10.52□□□□□ -0.72
CARMIL3-202ENST00000559694 RBBP8Q99708 897 aa10.52□□□□□ -0.72
CARMIL3-202ENST00000559694 C8orf33Q9H7E9 229 aaPredicted RBP10.52□□□□□ -0.72
CARMIL3-202ENST00000559694 DNAJC28Q9NX36 388 aa10.52□□□□□ -0.72
CARMIL3-202ENST00000559694 KIF17Q9P2E2 1029 aa10.52□□□□□ -0.72
CARMIL3-202ENST00000559694 TCRBV21S2A2A0A5A6 115 aa10.52□□□□□ -0.73
CARMIL3-202ENST00000559694 EPOP01588 193 aa10.52□□□□□ -0.73
CARMIL3-202ENST00000559694 F11P03951 625 aa10.52□□□□□ -0.73
CARMIL3-202ENST00000559694 CXCR2P25025 360 aa10.52□□□□□ -0.73
CARMIL3-202ENST00000559694 FASP25445 335 aa10.52□□□□□ -0.73
CARMIL3-202ENST00000559694 SLC1A2P43004 574 aa10.52□□□□□ -0.73
CARMIL3-202ENST00000559694 GNPDA1P46926 289 aa10.52□□□□□ -0.73
CARMIL3-202ENST00000559694 BLKP51451 505 aa10.52□□□□□ -0.73
CARMIL3-202ENST00000559694 AQP4P55087 323 aa10.52□□□□□ -0.73
CARMIL3-202ENST00000559694 ZNF460Q14592 562 aa10.52□□□□□ -0.73
CARMIL3-202ENST00000559694 ZNF805Q5CZA5 627 aa10.52□□□□□ -0.73
CARMIL3-202ENST00000559694 LDLRAP1Q5SW96 308 aa10.52□□□□□ -0.73
CARMIL3-202ENST00000559694 TANGO2Q6ICL3 276 aa10.52□□□□□ -0.73
CARMIL3-202ENST00000559694 PTCRAQ6ISU1 281 aaPredicted RBP10.52□□□□□ -0.73
CARMIL3-202ENST00000559694 HTR3DQ70Z44 454 aa10.52□□□□□ -0.73
CARMIL3-202ENST00000559694 ZNF438Q7Z4V0 828 aa10.52□□□□□ -0.73
CARMIL3-202ENST00000559694 ZCCHC7Q8N3Z6 543 aaKnown RBP10.52□□□□□ -0.73
CARMIL3-202ENST00000559694 SLCO2A1Q92959 643 aa10.52□□□□□ -0.73
CARMIL3-202ENST00000559694 REPS1Q96D71 796 aa10.52□□□□□ -0.73
CARMIL3-202ENST00000559694 ASB2Q96Q27 587 aa10.52□□□□□ -0.73
CARMIL3-202ENST00000559694 TIMMDC1Q9NPL8 285 aa10.52□□□□□ -0.73
CARMIL3-202ENST00000559694 ACSS2Q9NR19 701 aa10.52□□□□□ -0.73
CARMIL3-202ENST00000559694 SPATA6Q9NWH7 488 aaPredicted RBP10.52□□□□□ -0.73
CARMIL3-202ENST00000559694 SLC17A6Q9P2U8 582 aa10.52□□□□□ -0.73
CARMIL3-202ENST00000559694 RABGEF1Q9UJ41 708 aa10.52□□□□□ -0.73
CARMIL3-202ENST00000559694 CYP8B1Q9UNU6 501 aa10.52□□□□□ -0.73
CARMIL3-202ENST00000559694 ACTL7AQ9Y615 435 aa10.52□□□□□ -0.73
CARMIL3-202ENST00000559694 NR5A2O00482 541 aa10.52□□□□□ -0.73
CARMIL3-202ENST00000559694 FKBP9O95302 570 aa10.52□□□□□ -0.73
CARMIL3-202ENST00000559694 SLC6A4P31645 630 aa10.52□□□□□ -0.73
CARMIL3-202ENST00000559694 SOX9P48436 509 aa10.52□□□□□ -0.73
CARMIL3-202ENST00000559694 CBX3Q13185 183 aa10.52□□□□□ -0.73
CARMIL3-202ENST00000559694 TP53BP2Q13625 1128 aa10.52□□□□□ -0.73
CARMIL3-202ENST00000559694 PRKD1Q15139 912 aaPredicted RBP10.52□□□□□ -0.73
CARMIL3-202ENST00000559694 MAPK11Q15759 364 aa10.52□□□□□ -0.73
CARMIL3-202ENST00000559694 OTUD3Q5T2D3 398 aaPredicted RBP10.52□□□□□ -0.73
CARMIL3-202ENST00000559694 FKBP9P1Q75LS8 142 aa10.52□□□□□ -0.73
CARMIL3-202ENST00000559694 NANOGNBQ7Z5D8 188 aa10.52□□□□□ -0.73
CARMIL3-202ENST00000559694 DHFR2Q86XF0 187 aa10.52□□□□□ -0.73
CARMIL3-202ENST00000559694 GLMNQ92990 594 aa10.52□□□□□ -0.73
CARMIL3-202ENST00000559694 ATP6AP2A0A1C7CYW4 349 aa10.52□□□□□ -0.73
CARMIL3-202ENST00000559694 DYRK3O43781 588 aa10.52□□□□□ -0.73
CARMIL3-202ENST00000559694 NIPSNAP2O75323 286 aa10.52□□□□□ -0.73
CARMIL3-202ENST00000559694 ATP6AP2O75787 350 aa10.52□□□□□ -0.73
CARMIL3-202ENST00000559694 MTTPP55157 894 aa10.52□□□□□ -0.73
CARMIL3-202ENST00000559694 EIF2B5Q13144 721 aaKnown RBP10.52□□□□□ -0.73
CARMIL3-202ENST00000559694 RALGPS1Q5JS13 557 aa10.52□□□□□ -0.73
CARMIL3-202ENST00000559694 HEATR4Q86WZ0 1026 aa10.52□□□□□ -0.73
CARMIL3-202ENST00000559694 DRAXINQ8NBI3 349 aaPredicted RBP10.52□□□□□ -0.73
CARMIL3-202ENST00000559694 KCNN1Q92952 543 aa10.52□□□□□ -0.73
CARMIL3-202ENST00000559694 CLP1Q92989 425 aaKnown RBP10.52□□□□□ -0.73
CARMIL3-202ENST00000559694 ZNF641Q96N77 438 aaPredicted RBP10.52□□□□□ -0.73
CARMIL3-202ENST00000559694 TTLL2Q9BWV7 592 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms