RNA–Protein interactions for RNA: ENST00000559494.1

TSPAN3-207, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-207ENST00000559494 SPANXN3Q5MJ09 141 aa19.9■□□□□ 0.78
TSPAN3-207ENST00000559494 UNC5AQ6ZN44 842 aa19.9■□□□□ 0.78
TSPAN3-207ENST00000559494 CILP2Q8IUL8 1156 aa19.9■□□□□ 0.78
TSPAN3-207ENST00000559494 MAPK15Q8TD08 544 aa19.9■□□□□ 0.78
TSPAN3-207ENST00000559494 CFAP36Q96G28 342 aa19.9■□□□□ 0.78
TSPAN3-207ENST00000559494 CCDC3Q9BQI4 270 aa19.9■□□□□ 0.78
TSPAN3-207ENST00000559494 P2RY12Q9H244 342 aa19.9■□□□□ 0.78
TSPAN3-207ENST00000559494 ZNF624Q9P2J8 865 aaPredicted RBP19.9■□□□□ 0.78
TSPAN3-207ENST00000559494 ZC3H7BQ9UGR2 993 aaKnown RBP19.9■□□□□ 0.78
TSPAN3-207ENST00000559494 WASF3Q9UPY6 502 aa19.9■□□□□ 0.78
TSPAN3-207ENST00000559494 KIR2DS5A0A0G2JLQ3 304 aa19.89■□□□□ 0.77
TSPAN3-207ENST00000559494 A0A0G2JNG1 304 aa19.89■□□□□ 0.77
TSPAN3-207ENST00000559494 KIR2DS3K7RE56 304 aa19.89■□□□□ 0.77
TSPAN3-207ENST00000559494 OPA1O60313 960 aa19.89■□□□□ 0.77
TSPAN3-207ENST00000559494 S1PR4O95977 384 aa19.89■□□□□ 0.77
TSPAN3-207ENST00000559494 F7P08709 466 aaPredicted RBP19.89■□□□□ 0.77
TSPAN3-207ENST00000559494 OR56A5P0C7T3 313 aa19.89■□□□□ 0.77
TSPAN3-207ENST00000559494 CDK4P11802 303 aa19.89■□□□□ 0.77
TSPAN3-207ENST00000559494 PNLIPP16233 465 aa19.89■□□□□ 0.77
TSPAN3-207ENST00000559494 XRCC1P18887 633 aaPredicted RBP19.89■□□□□ 0.77
TSPAN3-207ENST00000559494 OGNP20774 298 aaKnown RBP19.89■□□□□ 0.77
TSPAN3-207ENST00000559494 SLC19A1P41440 591 aa19.89■□□□□ 0.77
TSPAN3-207ENST00000559494 FASLGP48023 281 aa19.89■□□□□ 0.77
TSPAN3-207ENST00000559494 CAV1Q03135 178 aa19.89■□□□□ 0.77
TSPAN3-207ENST00000559494 FOXC1Q12948 553 aa19.89■□□□□ 0.77
TSPAN3-207ENST00000559494 CTBP1Q13363 440 aa19.89■□□□□ 0.77
TSPAN3-207ENST00000559494 KIR2DS5Q14953 304 aa19.89■□□□□ 0.77
TSPAN3-207ENST00000559494 GLE1Q53GS7 698 aaKnown RBP19.89■□□□□ 0.77
TSPAN3-207ENST00000559494 HSP90AA5PQ58FG0 334 aa19.89■□□□□ 0.77
TSPAN3-207ENST00000559494 ZNF789Q5FWF6 425 aa19.89■□□□□ 0.77
TSPAN3-207ENST00000559494 CHCHD2P9Q5T1J5 151 aaPredicted RBP19.89■□□□□ 0.77
TSPAN3-207ENST00000559494 STEAP4Q687X5 459 aa19.89■□□□□ 0.77
TSPAN3-207ENST00000559494 ZNF438Q7Z4V0 828 aa19.89■□□□□ 0.77
TSPAN3-207ENST00000559494 DENND6AQ8IWF6 608 aa19.89■□□□□ 0.77
TSPAN3-207ENST00000559494 FBXO36Q8NEA4 188 aa19.89■□□□□ 0.77
TSPAN3-207ENST00000559494 HM13Q8TCT9 377 aa19.89■□□□□ 0.77
TSPAN3-207ENST00000559494 LPGAT1Q92604 370 aa19.89■□□□□ 0.77
TSPAN3-207ENST00000559494 L2HGDHQ9H9P8 463 aa19.89■□□□□ 0.77
TSPAN3-207ENST00000559494 EPB41L5Q9HCM4 733 aa19.89■□□□□ 0.77
TSPAN3-207ENST00000559494 ACSL5Q9ULC5 683 aa19.89■□□□□ 0.77
TSPAN3-207ENST00000559494 PSMD13Q9UNM6 376 aa19.89■□□□□ 0.77
TSPAN3-207ENST00000559494 PTPRBP23467 1997 aa19.88■□□□□ 0.77
TSPAN3-207ENST00000559494 RHPN2P1A8MT19 583 aa19.88■□□□□ 0.77
TSPAN3-207ENST00000559494 IQCF5A8MTL0 148 aa19.88■□□□□ 0.77
TSPAN3-207ENST00000559494 QSOX1O00391 747 aa19.88■□□□□ 0.77
TSPAN3-207ENST00000559494 B4GAT1O43505 415 aa19.88■□□□□ 0.77
TSPAN3-207ENST00000559494 HYAL3O43820 417 aaPredicted RBP19.88■□□□□ 0.77
TSPAN3-207ENST00000559494 ERVK-10P10266 1014 aa19.88■□□□□ 0.77
TSPAN3-207ENST00000559494 SLC2A4P14672 509 aa19.88■□□□□ 0.77
TSPAN3-207ENST00000559494 UBE2IP63279 158 aaKnown RBP19.88■□□□□ 0.77
TSPAN3-207ENST00000559494 CCL7P80098 99 aa19.88■□□□□ 0.77
TSPAN3-207ENST00000559494 INSM1Q01101 510 aaPredicted RBP19.88■□□□□ 0.77
TSPAN3-207ENST00000559494 ZNF470Q6ECI4 717 aa19.88■□□□□ 0.77
TSPAN3-207ENST00000559494 KCNMB4Q86W47 210 aa19.88■□□□□ 0.77
TSPAN3-207ENST00000559494 Q8N9G6 341 aaPredicted RBP19.88■□□□□ 0.77
TSPAN3-207ENST00000559494 LRRN4CLQ8ND94 238 aa19.88■□□□□ 0.77
TSPAN3-207ENST00000559494 LKAAEAR1Q8TD35 194 aa19.88■□□□□ 0.77
TSPAN3-207ENST00000559494 COG4Q9H9E3 785 aa19.88■□□□□ 0.77
TSPAN3-207ENST00000559494 VPS37BQ9H9H4 285 aa19.88■□□□□ 0.77
TSPAN3-207ENST00000559494 SARS2Q9NP81 518 aaKnown RBP19.88■□□□□ 0.77
TSPAN3-207ENST00000559494 SAYSD1Q9NPB0 183 aa19.88■□□□□ 0.77
TSPAN3-207ENST00000559494 IARS2Q9NSE4 1012 aaKnown RBP19.88■□□□□ 0.77
TSPAN3-207ENST00000559494 ZDHHC18Q9NUE0 388 aa19.88■□□□□ 0.77
TSPAN3-207ENST00000559494 CPNE7Q9UBL6 633 aa19.88■□□□□ 0.77
TSPAN3-207ENST00000559494 PRAMEF33A0A0G2JMD5 474 aa19.87■□□□□ 0.77
TSPAN3-207ENST00000559494 UBA6A0AVT1 1052 aaPredicted RBP19.87■□□□□ 0.77
TSPAN3-207ENST00000559494 OR52A4PA6NMU1 304 aa19.87■□□□□ 0.77
TSPAN3-207ENST00000559494 EIF3HO15372 352 aaKnown RBP eCLIP19.87■□□□□ 0.77
TSPAN3-207ENST00000559494 FTH1P02794 183 aa19.87■□□□□ 0.77
TSPAN3-207ENST00000559494 GSTM1P09488 218 aa19.87■□□□□ 0.77
TSPAN3-207ENST00000559494 ITGB6P18564 788 aa19.87■□□□□ 0.77
TSPAN3-207ENST00000559494 RPS3P23396 243 aaKnown RBP eCLIP19.87■□□□□ 0.773e-7■■■□□ 18.1
TSPAN3-207ENST00000559494 FMO4P31512 558 aa19.87■□□□□ 0.77
TSPAN3-207ENST00000559494 GSTM4Q03013 218 aa19.87■□□□□ 0.77
TSPAN3-207ENST00000559494 HHEXQ03014 270 aa19.87■□□□□ 0.77
TSPAN3-207ENST00000559494 NR1D2Q14995 579 aa19.87■□□□□ 0.77
TSPAN3-207ENST00000559494 RPE65Q16518 533 aa19.87■□□□□ 0.77
TSPAN3-207ENST00000559494 TRMT10BQ6PF06 316 aaKnown RBP19.87■□□□□ 0.77
TSPAN3-207ENST00000559494 NAPRTQ6XQN6 538 aa19.87■□□□□ 0.77
TSPAN3-207ENST00000559494 SLC9B2Q86UD5 537 aa19.87■□□□□ 0.77
TSPAN3-207ENST00000559494 LRRC6Q86X45 466 aa19.87■□□□□ 0.77
TSPAN3-207ENST00000559494 LMNTD2Q8IXW0 634 aa19.87■□□□□ 0.77
TSPAN3-207ENST00000559494 ZBED8Q8IZ13 594 aa19.87■□□□□ 0.77
TSPAN3-207ENST00000559494 KRT222Q8N1A0 295 aa19.87■□□□□ 0.77
TSPAN3-207ENST00000559494 SPDYE1Q8NFV5 336 aaPredicted RBP19.87■□□□□ 0.77
TSPAN3-207ENST00000559494 CALML6Q8TD86 181 aa19.87■□□□□ 0.77
TSPAN3-207ENST00000559494 BIRC8Q96P09 236 aa19.87■□□□□ 0.77
TSPAN3-207ENST00000559494 INSM2Q96T92 566 aaPredicted RBP19.87■□□□□ 0.77
TSPAN3-207ENST00000559494 WWP1Q9H0M0 922 aa19.87■□□□□ 0.77
TSPAN3-207ENST00000559494 ABCG4Q9H172 646 aa19.87■□□□□ 0.77
TSPAN3-207ENST00000559494 FBXO5Q9UKT4 447 aa19.87■□□□□ 0.77
TSPAN3-207ENST00000559494 CRYL1Q9Y2S2 319 aa19.87■□□□□ 0.77
TSPAN3-207ENST00000559494 A0A1W2PQM1 296 aa19.86■□□□□ 0.77
TSPAN3-207ENST00000559494 PDHA2P29803 388 aa19.86■□□□□ 0.77
TSPAN3-207ENST00000559494 CCR7P32248 378 aa19.86■□□□□ 0.77
TSPAN3-207ENST00000559494 SLC1A2P43004 574 aa19.86■□□□□ 0.77
TSPAN3-207ENST00000559494 EIF3BP55884 814 aaKnown RBP19.86■□□□□ 0.77
TSPAN3-207ENST00000559494 OR1D5P58170 312 aa19.86■□□□□ 0.77
TSPAN3-207ENST00000559494 BIRC2Q13490 618 aa19.86■□□□□ 0.77
TSPAN3-207ENST00000559494 CTSL3PQ5NE16 218 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms