RNA–Protein interactions for RNA: ENST00000559389.1

SNX1-206, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-206ENST00000559389 SLMAPQ14BN4 828 aa21.28■■□□□ 1
SNX1-206ENST00000559389 FAM153CQ494X1 144 aa21.28■■□□□ 1
SNX1-206ENST00000559389 UBAP2Q5T6F2 1119 aaKnown RBP21.28■■□□□ 1
SNX1-206ENST00000559389 CNSTQ6PJW8 725 aa21.28■■□□□ 1
SNX1-206ENST00000559389 OGFOD3Q6PK18 319 aa21.28■■□□□ 1
SNX1-206ENST00000559389 SFTPA2Q8IWL1 248 aa21.28■■□□□ 1
SNX1-206ENST00000559389 NAGSQ8N159 534 aa21.28■■□□□ 1
SNX1-206ENST00000559389 DEFB124Q8NES8 71 aa21.28■■□□□ 1
SNX1-206ENST00000559389 GPR156Q8NFN8 814 aa21.28■■□□□ 1
SNX1-206ENST00000559389 ZDHHC1Q8WTX9 485 aa21.28■■□□□ 1
SNX1-206ENST00000559389 CNDP2Q96KP4 475 aaKnown RBP21.28■■□□□ 1
SNX1-206ENST00000559389 PANX3Q96QZ0 392 aa21.28■■□□□ 1
SNX1-206ENST00000559389 CDC6Q99741 560 aa21.28■■□□□ 1
SNX1-206ENST00000559389 RTKNQ9BST9 563 aa21.28■■□□□ 1
SNX1-206ENST00000559389 TSSK1BQ9BXA7 367 aa21.28■■□□□ 1
SNX1-206ENST00000559389 FAM8A1Q9UBU6 413 aa21.28■■□□□ 1
SNX1-206ENST00000559389 PIKFYVEQ9Y2I7 2098 aa21.27■■□□□ 1
SNX1-206ENST00000559389 IQCF5A8MTL0 148 aa21.27■■□□□ 1
SNX1-206ENST00000559389 SNX2O60749 519 aa21.27■■□□□ 1
SNX1-206ENST00000559389 F3P13726 295 aa21.27■■□□□ 1
SNX1-206ENST00000559389 PKMP14618 531 aaKnown RBP21.27■■□□□ 1
SNX1-206ENST00000559389 IDSP22304 550 aa21.27■■□□□ 1
SNX1-206ENST00000559389 GABRB3P28472 473 aa21.27■■□□□ 1
SNX1-206ENST00000559389 FMO4P31512 558 aa21.27■■□□□ 1
SNX1-206ENST00000559389 KYNUQ16719 465 aa21.27■■□□□ 1
SNX1-206ENST00000559389 AGAP9Q5VTM2 703 aa21.27■■□□□ 1
SNX1-206ENST00000559389 METRNLQ641Q3 311 aa21.27■■□□□ 1
SNX1-206ENST00000559389 WASH2PQ6VEQ5 465 aa21.27■■□□□ 1
SNX1-206ENST00000559389 SLC26A11Q86WA9 606 aa21.27■■□□□ 1
SNX1-206ENST00000559389 C17orf82Q86X59 251 aaPredicted RBP21.27■■□□□ 1
SNX1-206ENST00000559389 KRT222Q8N1A0 295 aa21.27■■□□□ 1
SNX1-206ENST00000559389 LILRA3Q8N6C8 439 aaPredicted RBP21.27■■□□□ 1
SNX1-206ENST00000559389 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP21.27■■□□□ 12e-6■■■■■ 29
SNX1-206ENST00000559389 ELMO1Q92556 727 aa21.27■■□□□ 1
SNX1-206ENST00000559389 CDKL2Q92772 493 aa21.27■■□□□ 1
SNX1-206ENST00000559389 TXLNGYQ9BZA5 131 aa21.27■■□□□ 1
SNX1-206ENST00000559389 SLC32A1Q9H598 525 aa21.27■■□□□ 1
SNX1-206ENST00000559389 WASH6PQ9NQA3 447 aa21.27■■□□□ 1
SNX1-206ENST00000559389 PRDM8Q9NQV8 689 aa21.27■■□□□ 1
SNX1-206ENST00000559389 NSMCE4AQ9NXX6 385 aa21.27■■□□□ 1
SNX1-206ENST00000559389 NCKIPSDQ9NZQ3 722 aa21.27■■□□□ 1
SNX1-206ENST00000559389 PSAT1Q9Y617 370 aa21.27■■□□□ 1
SNX1-206ENST00000559389 LAMA1P25391 3075 aa21.26■□□□□ 0.99
SNX1-206ENST00000559389 PDZK1P1A8MUH7 402 aa21.26■□□□□ 0.99
SNX1-206ENST00000559389 NIPSNAP2O75323 286 aa21.26■□□□□ 0.99
SNX1-206ENST00000559389 HAUS5O94927 633 aa21.26■□□□□ 0.99
SNX1-206ENST00000559389 LDOC1O95751 146 aaPredicted RBP21.26■□□□□ 0.99
SNX1-206ENST00000559389 CKMT1AP12532 417 aa21.26■□□□□ 0.99
SNX1-206ENST00000559389 SLC2A4P14672 509 aa21.26■□□□□ 0.99
SNX1-206ENST00000559389 ITGB6P18564 788 aa21.26■□□□□ 0.99
SNX1-206ENST00000559389 CCR7P32248 378 aa21.26■□□□□ 0.99
SNX1-206ENST00000559389 CD151P48509 253 aa21.26■□□□□ 0.99
SNX1-206ENST00000559389 VSNL1P62760 191 aa21.26■□□□□ 0.99
SNX1-206ENST00000559389 SEPT7Q16181 437 aaKnown RBP21.26■□□□□ 0.99
SNX1-206ENST00000559389 ERCC6LQ2NKX8 1250 aa21.26■□□□□ 0.99
SNX1-206ENST00000559389 C14orf28Q4W4Y0 310 aa21.26■□□□□ 0.99
SNX1-206ENST00000559389 WDR93Q6P2C0 686 aa21.26■□□□□ 0.99
SNX1-206ENST00000559389 ZNF549Q6P9A3 640 aa21.26■□□□□ 0.99
SNX1-206ENST00000559389 ABRAXAS1Q6UWZ7 409 aa21.26■□□□□ 0.99
SNX1-206ENST00000559389 GLRX5Q86SX6 157 aa21.26■□□□□ 0.99
SNX1-206ENST00000559389 FBF1Q8TES7 1133 aa21.26■□□□□ 0.99
SNX1-206ENST00000559389 PATE1Q8WXA2 126 aa21.26■□□□□ 0.99
SNX1-206ENST00000559389 GLMNQ92990 594 aa21.26■□□□□ 0.99
SNX1-206ENST00000559389 FUT8Q9BYC5 575 aa21.26■□□□□ 0.99
SNX1-206ENST00000559389 DLL3Q9NYJ7 618 aa21.26■□□□□ 0.99
SNX1-206ENST00000559389 COMMD10Q9Y6G5 202 aa21.26■□□□□ 0.99
SNX1-206ENST00000559389 ARID1BQ8NFD5 2236 aaPredicted RBP21.26■□□□□ 0.99
SNX1-206ENST00000559389 CXorf49A8MYA2 514 aaPredicted RBP21.25■□□□□ 0.99
SNX1-206ENST00000559389 LIN7AO14910 233 aaPredicted RBP21.25■□□□□ 0.99
SNX1-206ENST00000559389 PIAS1O75925 651 aa21.25■□□□□ 0.99
SNX1-206ENST00000559389 TRIM16O95361 564 aa21.25■□□□□ 0.99
SNX1-206ENST00000559389 AHSGP02765 367 aa21.25■□□□□ 0.99
SNX1-206ENST00000559389 BRAFP15056 766 aa21.25■□□□□ 0.99
SNX1-206ENST00000559389 PHBP35232 272 aa21.25■□□□□ 0.99
SNX1-206ENST00000559389 RPIAP49247 311 aa21.25■□□□□ 0.99
SNX1-206ENST00000559389 MAZP56270 477 aaKnown RBP21.25■□□□□ 0.99
SNX1-206ENST00000559389 RPA4Q13156 261 aa21.25■□□□□ 0.99
SNX1-206ENST00000559389 BOP1Q14137 746 aaKnown RBP21.25■□□□□ 0.99
SNX1-206ENST00000559389 NR0B2Q15466 257 aa21.25■□□□□ 0.99
SNX1-206ENST00000559389 KBTBD12Q3ZCT8 623 aa21.25■□□□□ 0.99
SNX1-206ENST00000559389 IYDQ6PHW0 289 aa21.25■□□□□ 0.99
SNX1-206ENST00000559389 CFAP206Q8IYR0 622 aa21.25■□□□□ 0.99
SNX1-206ENST00000559389 SFRP1Q8N474 314 aa21.25■□□□□ 0.99
SNX1-206ENST00000559389 SLC37A2Q8TED4 501 aa21.25■□□□□ 0.99
SNX1-206ENST00000559389 KCNJ9Q92806 393 aa21.25■□□□□ 0.99
SNX1-206ENST00000559389 AARSD1Q9BTE6 412 aaKnown RBP21.25■□□□□ 0.99
SNX1-206ENST00000559389 CCDC68Q9H2F9 335 aa21.25■□□□□ 0.99
SNX1-206ENST00000559389 EVA1BQ9NVM1 165 aa21.25■□□□□ 0.99
SNX1-206ENST00000559389 ACSL5Q9ULC5 683 aa21.25■□□□□ 0.99
SNX1-206ENST00000559389 CORO1CQ9ULV4 474 aaPredicted RBP21.25■□□□□ 0.99
SNX1-206ENST00000559389 WDR37Q9Y2I8 494 aa21.25■□□□□ 0.99
SNX1-206ENST00000559389 MED16Q9Y2X0 877 aa21.25■□□□□ 0.99
SNX1-206ENST00000559389 PIEZO1Q92508 2521 aa21.24■□□□□ 0.99
SNX1-206ENST00000559389 KIR2DS5A0A0G2JLQ3 304 aa21.24■□□□□ 0.99
SNX1-206ENST00000559389 A0A0G2JNG1 304 aa21.24■□□□□ 0.99
SNX1-206ENST00000559389 SLC5A10A0PJK1 596 aa21.24■□□□□ 0.99
SNX1-206ENST00000559389 KIR2DS3K7RE56 304 aa21.24■□□□□ 0.99
SNX1-206ENST00000559389 TNFSF14O43557 240 aa21.24■□□□□ 0.99
SNX1-206ENST00000559389 ACSL3O95573 720 aa21.24■□□□□ 0.99
SNX1-206ENST00000559389 SLC35G4P0C7Q5 338 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms