RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 ATP1A3P13637 1013 aa5.06□□□□□ -1.6
SPG11-208ENST00000558155 COX6B1P14854 86 aa5.06□□□□□ -1.6
SPG11-208ENST00000558155 BRAFP15056 766 aa5.06□□□□□ -1.6
SPG11-208ENST00000558155 CAPN3P20807 821 aa5.06□□□□□ -1.6
SPG11-208ENST00000558155 AMPD1P23109 780 aa5.06□□□□□ -1.6
SPG11-208ENST00000558155 MIPP30301 263 aa5.06□□□□□ -1.6
SPG11-208ENST00000558155 HNRNPH3P31942 346 aaKnown RBP5.06□□□□□ -1.6
SPG11-208ENST00000558155 OTX2P32243 289 aa5.06□□□□□ -1.6
SPG11-208ENST00000558155 CA5AP35218 305 aa5.06□□□□□ -1.6
SPG11-208ENST00000558155 SERPINB6P35237 376 aa5.06□□□□□ -1.6
SPG11-208ENST00000558155 DRG2P55039 364 aaKnown RBP5.06□□□□□ -1.6
SPG11-208ENST00000558155 SOX8P57073 446 aa5.06□□□□□ -1.6
SPG11-208ENST00000558155 JAM2P57087 298 aa5.06□□□□□ -1.6
SPG11-208ENST00000558155 OGDHQ02218 1023 aa5.06□□□□□ -1.6
SPG11-208ENST00000558155 MAMLD1Q13495 774 aa5.06□□□□□ -1.6
SPG11-208ENST00000558155 ATP1A4Q13733 1029 aa5.06□□□□□ -1.6
SPG11-208ENST00000558155 GTF2H3Q13889 308 aa5.06□□□□□ -1.6
SPG11-208ENST00000558155 DPYSQ14117 519 aa5.06□□□□□ -1.6
SPG11-208ENST00000558155 LLGL1Q15334 1064 aa5.06□□□□□ -1.6
SPG11-208ENST00000558155 GPR19Q15760 415 aa5.06□□□□□ -1.6
SPG11-208ENST00000558155 PLA2G4EQ3MJ16 856 aa5.06□□□□□ -1.6
SPG11-208ENST00000558155 VWA2Q5GFL6 755 aa5.06□□□□□ -1.6
SPG11-208ENST00000558155 ZNF569Q5MCW4 686 aa5.06□□□□□ -1.6
SPG11-208ENST00000558155 DCAF10Q5QP82 559 aa5.06□□□□□ -1.6
SPG11-208ENST00000558155 CCDC122Q5T0U0 273 aa5.06□□□□□ -1.6
SPG11-208ENST00000558155 FKBP15Q5T1M5 1219 aa5.06□□□□□ -1.6
SPG11-208ENST00000558155 ZNF648Q5T619 568 aaPredicted RBP5.06□□□□□ -1.6
SPG11-208ENST00000558155 PDPK2PQ6A1A2 396 aa5.06□□□□□ -1.6
SPG11-208ENST00000558155 FCRL6Q6DN72 434 aa5.06□□□□□ -1.6
SPG11-208ENST00000558155 LCN10Q6JVE6 187 aa5.06□□□□□ -1.6
SPG11-208ENST00000558155 CERS6Q6ZMG9 384 aa5.06□□□□□ -1.6
SPG11-208ENST00000558155 CUZD1Q86UP6 607 aa5.06□□□□□ -1.6
SPG11-208ENST00000558155 FJX1Q86VR8 437 aa5.06□□□□□ -1.6
SPG11-208ENST00000558155 PARP9Q8IXQ6 854 aa5.06□□□□□ -1.6
SPG11-208ENST00000558155 MCOLN2Q8IZK6 566 aa5.06□□□□□ -1.6
SPG11-208ENST00000558155 CARFQ8N187 725 aa5.06□□□□□ -1.6
SPG11-208ENST00000558155 TTC30BQ8N4P2 665 aa5.06□□□□□ -1.6
SPG11-208ENST00000558155 TRAM1L1Q8N609 369 aa5.06□□□□□ -1.6
SPG11-208ENST00000558155 SLC38A9Q8NBW4 561 aa5.06□□□□□ -1.6
SPG11-208ENST00000558155 LPCAT1Q8NF37 534 aa5.06□□□□□ -1.6
SPG11-208ENST00000558155 DNAJB14Q8TBM8 379 aa5.06□□□□□ -1.6
SPG11-208ENST00000558155 BRSK1Q8TDC3 778 aa5.06□□□□□ -1.6
SPG11-208ENST00000558155 FAR1Q8WVX9 515 aa5.06□□□□□ -1.6
SPG11-208ENST00000558155 ZFPM2Q8WW38 1151 aa5.06□□□□□ -1.6
SPG11-208ENST00000558155 GLYATL1Q969I3 302 aa5.06□□□□□ -1.6
SPG11-208ENST00000558155 TTC25Q96NG3 672 aa5.06□□□□□ -1.6
SPG11-208ENST00000558155 AGPAT1Q99943 283 aa5.06□□□□□ -1.6
SPG11-208ENST00000558155 C17orf62Q9BQA9 187 aa5.06□□□□□ -1.6
SPG11-208ENST00000558155 ADGRE3Q9BY15 652 aa5.06□□□□□ -1.6
SPG11-208ENST00000558155 XPO4Q9C0E2 1151 aaKnown RBP5.06□□□□□ -1.6
SPG11-208ENST00000558155 ZNF552Q9H707 407 aaPredicted RBP5.06□□□□□ -1.6
SPG11-208ENST00000558155 ACTR5Q9H9F9 607 aaPredicted RBP5.06□□□□□ -1.6
SPG11-208ENST00000558155 ZFYVE1Q9HBF4 777 aa5.06□□□□□ -1.6
SPG11-208ENST00000558155 PCDH9Q9HC56 1237 aa5.06□□□□□ -1.6
SPG11-208ENST00000558155 ARFGAP3Q9NP61 516 aa5.06□□□□□ -1.6
SPG11-208ENST00000558155 NLRC4Q9NPP4 1024 aa5.06□□□□□ -1.6
SPG11-208ENST00000558155 RBM22Q9NW64 420 aaKnown RBP eCLIP5.06□□□□□ -1.6
SPG11-208ENST00000558155 SOHLH2Q9NX45 425 aa5.06□□□□□ -1.6
SPG11-208ENST00000558155 TRIM10Q9UDY6 481 aa5.06□□□□□ -1.6
SPG11-208ENST00000558155 AMACRQ9UHK6 382 aa5.06□□□□□ -1.6
SPG11-208ENST00000558155 GPN3Q9UHW5 284 aaPredicted RBP5.06□□□□□ -1.6
SPG11-208ENST00000558155 NTNG1Q9Y2I2 539 aa5.06□□□□□ -1.6
SPG11-208ENST00000558155 ANKRD12Q6UB98 2062 aa5.06□□□□□ -1.6
SPG11-208ENST00000558155 CNTRLQ7Z7A1 2325 aa5.06□□□□□ -1.6
SPG11-208ENST00000558155 A0A1W2PQJ5 194 aa5.05□□□□□ -1.6
SPG11-208ENST00000558155 OR5K3A6NET4 321 aa5.05□□□□□ -1.6
SPG11-208ENST00000558155 SLC9B1P1A6NJY1 282 aa5.05□□□□□ -1.6
SPG11-208ENST00000558155 POP7O75817 140 aaKnown RBP5.05□□□□□ -1.6
SPG11-208ENST00000558155 CAPN1P07384 714 aa5.05□□□□□ -1.6
SPG11-208ENST00000558155 BPIP17213 487 aa5.05□□□□□ -1.6
SPG11-208ENST00000558155 CYP2A7P20853 494 aa5.05□□□□□ -1.6
SPG11-208ENST00000558155 IL4RP24394 825 aa5.05□□□□□ -1.6
SPG11-208ENST00000558155 EEF1GP26641 437 aaKnown RBP5.05□□□□□ -1.6
SPG11-208ENST00000558155 HTR1EP28566 365 aa5.05□□□□□ -1.6
SPG11-208ENST00000558155 RORAP35398 523 aa5.05□□□□□ -1.6
SPG11-208ENST00000558155 TSFMP43897 325 aaKnown RBP5.05□□□□□ -1.6
SPG11-208ENST00000558155 GSK3AP49840 483 aa5.05□□□□□ -1.6
SPG11-208ENST00000558155 ZNF165P49910 485 aa5.05□□□□□ -1.6
SPG11-208ENST00000558155 PPP1CAP62136 330 aa5.05□□□□□ -1.6
SPG11-208ENST00000558155 DSC2Q02487 901 aa5.05□□□□□ -1.6
SPG11-208ENST00000558155 TMEM115Q12893 351 aaPredicted RBP5.05□□□□□ -1.6
SPG11-208ENST00000558155 PRKAA1Q13131 559 aa5.05□□□□□ -1.6
SPG11-208ENST00000558155 NCF4Q15080 339 aa5.05□□□□□ -1.6
SPG11-208ENST00000558155 RPE65Q16518 533 aa5.05□□□□□ -1.6
SPG11-208ENST00000558155 CAMK4Q16566 473 aa5.05□□□□□ -1.6
SPG11-208ENST00000558155 QPCTQ16769 361 aa5.05□□□□□ -1.6
SPG11-208ENST00000558155 ZNF630Q2M218 657 aaPredicted RBP5.05□□□□□ -1.6
SPG11-208ENST00000558155 HSP90AA4PQ58FG1 418 aa5.05□□□□□ -1.6
SPG11-208ENST00000558155 TCP11X2Q5H9J9 407 aa5.05□□□□□ -1.6
SPG11-208ENST00000558155 PRAMEF17Q5VTA0 474 aa5.05□□□□□ -1.6
SPG11-208ENST00000558155 IRAK1BP1Q5VVH5 260 aa5.05□□□□□ -1.6
SPG11-208ENST00000558155 MLIPQ5VWP3 458 aa5.05□□□□□ -1.6
SPG11-208ENST00000558155 ALS2CLQ60I27 953 aa5.05□□□□□ -1.6
SPG11-208ENST00000558155 TIGD7Q6NT04 549 aaPredicted RBP5.05□□□□□ -1.6
SPG11-208ENST00000558155 MTFR2Q6P444 385 aa5.05□□□□□ -1.6
SPG11-208ENST00000558155 POLNQ7Z5Q5 900 aa5.05□□□□□ -1.6
SPG11-208ENST00000558155 AMZ2Q86W34 360 aa5.05□□□□□ -1.6
SPG11-208ENST00000558155 OOSP2Q86WS3 158 aa5.05□□□□□ -1.6
SPG11-208ENST00000558155 SYTL1Q8IYJ3 562 aa5.05□□□□□ -1.6
SPG11-208ENST00000558155 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms