RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 HMX2A2RU54 273 aa12.2□□□□□ -0.46
TPM1-209ENST00000558072 POM121BA6NF01 834 aa12.2□□□□□ -0.46
TPM1-209ENST00000558072 SYCE1LA8MT33 242 aa12.2□□□□□ -0.46
TPM1-209ENST00000558072 H0Y8X5 98 aa12.2□□□□□ -0.46
TPM1-209ENST00000558072 H3BM21 787 aa12.2□□□□□ -0.46
TPM1-209ENST00000558072 TLR4O00206 839 aa12.2□□□□□ -0.46
TPM1-209ENST00000558072 VILLO15195 856 aa12.2□□□□□ -0.46
TPM1-209ENST00000558072 BCAT2O15382 392 aaPredicted RBP12.2□□□□□ -0.46
TPM1-209ENST00000558072 KDM1AO60341 852 aa12.2□□□□□ -0.46
TPM1-209ENST00000558072 DFNA5O60443 496 aa12.2□□□□□ -0.46
TPM1-209ENST00000558072 NIPSNAP2O75323 286 aa12.2□□□□□ -0.46
TPM1-209ENST00000558072 MTX2O75431 263 aa12.2□□□□□ -0.46
TPM1-209ENST00000558072 POP7O75817 140 aaKnown RBP12.2□□□□□ -0.46
TPM1-209ENST00000558072 RPN2P04844 631 aa12.2□□□□□ -0.46
TPM1-209ENST00000558072 CEACAM5P06731 702 aa12.2□□□□□ -0.46
TPM1-209ENST00000558072 MPC1LP0DKB6 136 aa12.2□□□□□ -0.46
TPM1-209ENST00000558072 SLC2A4P14672 509 aa12.2□□□□□ -0.46
TPM1-209ENST00000558072 ZNF37AP17032 561 aaPredicted RBP12.2□□□□□ -0.46
TPM1-209ENST00000558072 AOAHP28039 575 aa12.2□□□□□ -0.46
TPM1-209ENST00000558072 CLCN7P51798 805 aa12.2□□□□□ -0.46
TPM1-209ENST00000558072 CDKN2DP55273 166 aa12.2□□□□□ -0.46
TPM1-209ENST00000558072 CLDN2P57739 230 aa12.2□□□□□ -0.46
TPM1-209ENST00000558072 PPP2R2AP63151 447 aa12.2□□□□□ -0.46
TPM1-209ENST00000558072 PPARDQ03181 441 aa12.2□□□□□ -0.46
TPM1-209ENST00000558072 DMPKQ09013 629 aa12.2□□□□□ -0.46
TPM1-209ENST00000558072 ASPHQ12797 758 aa12.2□□□□□ -0.46
TPM1-209ENST00000558072 TCF15Q12870 199 aa12.2□□□□□ -0.46
TPM1-209ENST00000558072 PDE1CQ14123 709 aaPredicted RBP12.2□□□□□ -0.46
TPM1-209ENST00000558072 DOK6Q6PKX4 331 aa12.2□□□□□ -0.46
TPM1-209ENST00000558072 DET1Q7L5Y6 550 aa12.2□□□□□ -0.46
TPM1-209ENST00000558072 PARGQ86W56 976 aa12.2□□□□□ -0.46
TPM1-209ENST00000558072 SPNS2Q8IVW8 549 aa12.2□□□□□ -0.46
TPM1-209ENST00000558072 BANPQ8N9N5 519 aa12.2□□□□□ -0.46
TPM1-209ENST00000558072 ZBTB44Q8NCP5 570 aa12.2□□□□□ -0.46
TPM1-209ENST00000558072 PHC3Q8NDX5 983 aa12.2□□□□□ -0.46
TPM1-209ENST00000558072 STAG3L4Q8TBR4 150 aa12.2□□□□□ -0.46
TPM1-209ENST00000558072 RDH11Q8TC12 318 aa12.2□□□□□ -0.46
TPM1-209ENST00000558072 CD200R1Q8TD46 325 aa12.2□□□□□ -0.46
TPM1-209ENST00000558072 MAGEC3Q8TD91 643 aa12.2□□□□□ -0.46
TPM1-209ENST00000558072 GLMNQ92990 594 aa12.2□□□□□ -0.46
TPM1-209ENST00000558072 ARL8AQ96BM9 186 aa12.2□□□□□ -0.46
TPM1-209ENST00000558072 CCDC126Q96EE4 140 aa12.2□□□□□ -0.46
TPM1-209ENST00000558072 OR2M4Q96R27 311 aa12.2□□□□□ -0.46
TPM1-209ENST00000558072 TRIM54Q9BYV2 358 aa12.2□□□□□ -0.46
TPM1-209ENST00000558072 MIR1-1HGQ9H1L0 117 aa12.2□□□□□ -0.46
TPM1-209ENST00000558072 SARS2Q9NP81 518 aaKnown RBP12.2□□□□□ -0.46
TPM1-209ENST00000558072 PCMTD2Q9NV79 361 aa12.2□□□□□ -0.46
TPM1-209ENST00000558072 MOSPD1Q9UJG1 213 aa12.2□□□□□ -0.46
TPM1-209ENST00000558072 THADAQ6YHU6 1953 aa12.19□□□□□ -0.46
TPM1-209ENST00000558072 A0A1W2PPM1 405 aa12.19□□□□□ -0.46
TPM1-209ENST00000558072 OR2AG2A6NM03 316 aa12.19□□□□□ -0.46
TPM1-209ENST00000558072 IFRD1O00458 451 aaPredicted RBP12.19□□□□□ -0.46
TPM1-209ENST00000558072 SLC16A5O15375 505 aa12.19□□□□□ -0.46
TPM1-209ENST00000558072 SLCO2B1O94956 709 aa12.19□□□□□ -0.46
TPM1-209ENST00000558072 C8GP07360 202 aa12.19□□□□□ -0.46
TPM1-209ENST00000558072 ENO2P09104 434 aaPredicted RBP12.19□□□□□ -0.46
TPM1-209ENST00000558072 SLC35E2BP0CK96 405 aa12.19□□□□□ -0.46
TPM1-209ENST00000558072 CCDC166P0CW27 439 aa12.19□□□□□ -0.46
TPM1-209ENST00000558072 TAC1P20366 129 aa12.19□□□□□ -0.46
TPM1-209ENST00000558072 NR1D1P20393 614 aa12.19□□□□□ -0.46
TPM1-209ENST00000558072 DHPSP49366 369 aaPredicted RBP12.19□□□□□ -0.46
TPM1-209ENST00000558072 CSRP3P50461 194 aa12.19□□□□□ -0.46
TPM1-209ENST00000558072 SRP54P61011 504 aaKnown RBP12.19□□□□□ -0.46
TPM1-209ENST00000558072 NAA20P61599 178 aa12.19□□□□□ -0.46
TPM1-209ENST00000558072 ARHGAP8P85298 464 aa12.19□□□□□ -0.46
TPM1-209ENST00000558072 SP140Q13342 867 aa12.19□□□□□ -0.46
TPM1-209ENST00000558072 SIM2Q14190 667 aaPredicted RBP12.19□□□□□ -0.46
TPM1-209ENST00000558072 CCDC6Q16204 474 aa12.19□□□□□ -0.46
TPM1-209ENST00000558072 PLK5Q496M5 336 aa12.19□□□□□ -0.46
TPM1-209ENST00000558072 PYCR3Q53H96 274 aa12.19□□□□□ -0.46
TPM1-209ENST00000558072 TTMPQ5BVD1 217 aa12.19□□□□□ -0.46
TPM1-209ENST00000558072 ZNF648Q5T619 568 aaPredicted RBP12.19□□□□□ -0.46
TPM1-209ENST00000558072 KCTD16Q68DU8 428 aa12.19□□□□□ -0.46
TPM1-209ENST00000558072 TTC23LQ6PF05 361 aa12.19□□□□□ -0.46
TPM1-209ENST00000558072 PRR23BQ6ZRT6 265 aa12.19□□□□□ -0.46
TPM1-209ENST00000558072 ADAMTSL2Q86TH1 951 aa12.19□□□□□ -0.46
TPM1-209ENST00000558072 TRIM74Q86UV6 250 aa12.19□□□□□ -0.46
TPM1-209ENST00000558072 HOMEZQ8IX15 550 aa12.19□□□□□ -0.46
TPM1-209ENST00000558072 AVL9Q8NBF6 648 aa12.19□□□□□ -0.46
TPM1-209ENST00000558072 RHEBL1Q8TAI7 183 aa12.19□□□□□ -0.46
TPM1-209ENST00000558072 FAM76AQ8TAV0 307 aa12.19□□□□□ -0.46
TPM1-209ENST00000558072 UBXN10Q96LJ8 280 aa12.19□□□□□ -0.46
TPM1-209ENST00000558072 SLC6A18Q96N87 628 aa12.19□□□□□ -0.46
TPM1-209ENST00000558072 OLFM1Q99784 485 aa12.19□□□□□ -0.46
TPM1-209ENST00000558072 MRPL57Q9BQC6 102 aaKnown RBP12.19□□□□□ -0.46
TPM1-209ENST00000558072 ORAI3Q9BRQ5 295 aa12.19□□□□□ -0.46
TPM1-209ENST00000558072 LGR4Q9BXB1 951 aa12.19□□□□□ -0.46
TPM1-209ENST00000558072 GSDMCQ9BYG8 508 aa12.19□□□□□ -0.46
TPM1-209ENST00000558072 SLC13A1Q9BZW2 595 aa12.19□□□□□ -0.46
TPM1-209ENST00000558072 ZDHHC5Q9C0B5 715 aa12.19□□□□□ -0.46
TPM1-209ENST00000558072 TFB2MQ9H5Q4 396 aaKnown RBP12.19□□□□□ -0.46
TPM1-209ENST00000558072 ERVMER34-1Q9H9K5 563 aa12.19□□□□□ -0.46
TPM1-209ENST00000558072 CARS2Q9HA77 564 aaKnown RBP12.19□□□□□ -0.46
TPM1-209ENST00000558072 TM9SF3Q9HD45 589 aa12.19□□□□□ -0.46
TPM1-209ENST00000558072 FSCN3Q9NQT6 498 aa12.19□□□□□ -0.46
TPM1-209ENST00000558072 GPR27Q9NS67 375 aa12.19□□□□□ -0.46
TPM1-209ENST00000558072 RUVBL2Q9Y230 463 aaKnown RBP12.19□□□□□ -0.46
TPM1-209ENST00000558072 TMEM98Q9Y2Y6 226 aa12.19□□□□□ -0.46
TPM1-209ENST00000558072 GPSM3Q9Y4H4 160 aa12.19□□□□□ -0.46
TPM1-209ENST00000558072 PRSS21Q9Y6M0 314 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms