RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 RBM12BQ8IXT5 1001 aaKnown RBP12.26□□□□□ -0.45
SLIRP-211ENST00000557623 PPIL6Q8IXY8 311 aa12.26□□□□□ -0.45
SLIRP-211ENST00000557623 LSMEM2Q8N112 164 aa12.26□□□□□ -0.45
SLIRP-211ENST00000557623 HM13Q8TCT9 377 aa12.26□□□□□ -0.45
SLIRP-211ENST00000557623 CXorf40BQ96DE9 158 aa12.26□□□□□ -0.45
SLIRP-211ENST00000557623 LIN37Q96GY3 246 aaPredicted RBP12.26□□□□□ -0.45
SLIRP-211ENST00000557623 ZNF778Q96MU6 729 aa12.26□□□□□ -0.45
SLIRP-211ENST00000557623 KIFC1Q9BW19 673 aa12.26□□□□□ -0.45
SLIRP-211ENST00000557623 EPB41L1Q9H4G0 881 aa12.26□□□□□ -0.45
SLIRP-211ENST00000557623 SLC2A6Q9UGQ3 507 aa12.26□□□□□ -0.45
SLIRP-211ENST00000557623 ASIC3Q9UHC3 531 aa12.26□□□□□ -0.45
SLIRP-211ENST00000557623 ATXN7L1Q9ULK2 861 aaPredicted RBP12.26□□□□□ -0.45
SLIRP-211ENST00000557623 SOX13Q9UN79 622 aa12.26□□□□□ -0.45
SLIRP-211ENST00000557623 PCDHB1Q9Y5F3 818 aa12.26□□□□□ -0.45
SLIRP-211ENST00000557623 KIF26BQ2KJY2 2108 aa12.26□□□□□ -0.45
SLIRP-211ENST00000557623 SPEGQ15772 3267 aa12.25□□□□□ -0.45
SLIRP-211ENST00000557623 IGHV1OR21-1A0A087WYE8 117 aa12.25□□□□□ -0.45
SLIRP-211ENST00000557623 CCDC187A0A096LP49 1063 aa12.25□□□□□ -0.45
SLIRP-211ENST00000557623 MAGEB16A2A368 324 aa12.25□□□□□ -0.45
SLIRP-211ENST00000557623 OR51F1A6NGY5 319 aa12.25□□□□□ -0.45
SLIRP-211ENST00000557623 SGTAO43765 313 aa12.25□□□□□ -0.45
SLIRP-211ENST00000557623 PRSS56P0CW18 603 aa12.25□□□□□ -0.45
SLIRP-211ENST00000557623 CD1CP29017 333 aa12.25□□□□□ -0.45
SLIRP-211ENST00000557623 SLC19A1P41440 591 aa12.25□□□□□ -0.45
SLIRP-211ENST00000557623 LSSP48449 732 aa12.25□□□□□ -0.45
SLIRP-211ENST00000557623 DRG2P55039 364 aaKnown RBP12.25□□□□□ -0.45
SLIRP-211ENST00000557623 CRADDP78560 199 aa12.25□□□□□ -0.45
SLIRP-211ENST00000557623 CYP4F3Q08477 520 aa12.25□□□□□ -0.45
SLIRP-211ENST00000557623 PTK6Q13882 451 aa12.25□□□□□ -0.45
SLIRP-211ENST00000557623 NFE2L1Q14494 772 aa12.25□□□□□ -0.45
SLIRP-211ENST00000557623 ANKRD22Q5VYY1 191 aa12.25□□□□□ -0.45
SLIRP-211ENST00000557623 KLHL7Q8IXQ5 586 aa12.25□□□□□ -0.45
SLIRP-211ENST00000557623 PIANPQ8IYJ0 282 aa12.25□□□□□ -0.45
SLIRP-211ENST00000557623 NAT8LQ8N9F0 302 aa12.25□□□□□ -0.45
SLIRP-211ENST00000557623 WDR36Q8NI36 951 aaKnown RBP12.25□□□□□ -0.45
SLIRP-211ENST00000557623 MDM1Q8TC05 714 aa12.25□□□□□ -0.45
SLIRP-211ENST00000557623 TMEM159Q96B96 161 aa12.25□□□□□ -0.45
SLIRP-211ENST00000557623 ATXN7L3BQ96GX2 97 aa12.25□□□□□ -0.45
SLIRP-211ENST00000557623 CCM2Q9BSQ5 444 aa12.25□□□□□ -0.45
SLIRP-211ENST00000557623 ZMYND15Q9H091 742 aa12.25□□□□□ -0.45
SLIRP-211ENST00000557623 POLR1BQ9H9Y6 1135 aa12.25□□□□□ -0.45
SLIRP-211ENST00000557623 TREX1Q9NSU2 369 aa12.25□□□□□ -0.45
SLIRP-211ENST00000557623 CATSPERZQ9NTU4 200 aa12.25□□□□□ -0.45
SLIRP-211ENST00000557623 SYBUQ9NX95 663 aa12.25□□□□□ -0.45
SLIRP-211ENST00000557623 AKAP7Q9P0M2 348 aaPredicted RBP12.25□□□□□ -0.45
SLIRP-211ENST00000557623 SCHIP1Q9P0W5 487 aaPredicted RBP12.25□□□□□ -0.45
SLIRP-211ENST00000557623 SAMD15Q9P1V8 674 aa12.25□□□□□ -0.45
SLIRP-211ENST00000557623 ZNF624Q9P2J8 865 aaPredicted RBP12.25□□□□□ -0.45
SLIRP-211ENST00000557623 LILRA5A6NI73 299 aa12.24□□□□□ -0.45
SLIRP-211ENST00000557623 SDR42E2A6NKP2 422 aa12.24□□□□□ -0.45
SLIRP-211ENST00000557623 DNALI1O14645 258 aaPredicted RBP12.24□□□□□ -0.45
SLIRP-211ENST00000557623 CASC3O15234 703 aaKnown RBP12.24□□□□□ -0.45
SLIRP-211ENST00000557623 TMEM63AO94886 807 aa12.24□□□□□ -0.45
SLIRP-211ENST00000557623 FTH1P02794 183 aa12.24□□□□□ -0.45
SLIRP-211ENST00000557623 CAPNS1P04632 268 aa12.24□□□□□ -0.45
SLIRP-211ENST00000557623 SLC35G4P0C7Q5 338 aa12.24□□□□□ -0.45
SLIRP-211ENST00000557623 OR56A5P0C7T3 313 aa12.24□□□□□ -0.45
SLIRP-211ENST00000557623 BRAFP15056 766 aa12.24□□□□□ -0.45
SLIRP-211ENST00000557623 PAMP19021 973 aa12.24□□□□□ -0.45
SLIRP-211ENST00000557623 NMBRP28336 390 aa12.24□□□□□ -0.45
SLIRP-211ENST00000557623 TTPAP49638 278 aa12.24□□□□□ -0.45
SLIRP-211ENST00000557623 PDX1P52945 283 aa12.24□□□□□ -0.45
SLIRP-211ENST00000557623 GABREP78334 506 aa12.24□□□□□ -0.45
SLIRP-211ENST00000557623 DR1Q01658 176 aa12.24□□□□□ -0.45
SLIRP-211ENST00000557623 ZFP36L1Q07352 338 aaKnown RBP12.24□□□□□ -0.45
SLIRP-211ENST00000557623 TRA2AQ13595 282 aaKnown RBP eCLIP12.24□□□□□ -0.45
SLIRP-211ENST00000557623 DHX34Q14147 1143 aaKnown RBP12.24□□□□□ -0.45
SLIRP-211ENST00000557623 CLCA4Q14CN2 919 aa12.24□□□□□ -0.45
SLIRP-211ENST00000557623 ST3GAL2Q16842 350 aa12.24□□□□□ -0.45
SLIRP-211ENST00000557623 KCTD19Q17RG1 926 aaPredicted RBP12.24□□□□□ -0.45
SLIRP-211ENST00000557623 C3orf38Q5JPI3 329 aa12.24□□□□□ -0.45
SLIRP-211ENST00000557623 CASC4Q6P4E1 433 aa12.24□□□□□ -0.45
SLIRP-211ENST00000557623 TMEM71Q6P5X7 295 aa12.24□□□□□ -0.45
SLIRP-211ENST00000557623 FAM83HQ6ZRV2 1179 aaPredicted RBP12.24□□□□□ -0.45
SLIRP-211ENST00000557623 TMEM26Q6ZUK4 368 aa12.24□□□□□ -0.45
SLIRP-211ENST00000557623 USP53Q70EK8 1073 aa12.24□□□□□ -0.45
SLIRP-211ENST00000557623 CAND1Q86VP6 1230 aaKnown RBP12.24□□□□□ -0.45
SLIRP-211ENST00000557623 ZNF761Q86XN6 746 aaPredicted RBP12.24□□□□□ -0.45
SLIRP-211ENST00000557623 CFAP206Q8IYR0 622 aa12.24□□□□□ -0.45
SLIRP-211ENST00000557623 C17orf53Q8N3J3 647 aaPredicted RBP12.24□□□□□ -0.45
SLIRP-211ENST00000557623 MPP5Q8N3R9 675 aa12.24□□□□□ -0.45
SLIRP-211ENST00000557623 OR4D9Q8NGE8 314 aa12.24□□□□□ -0.45
SLIRP-211ENST00000557623 SERPINB12Q96P63 405 aa12.24□□□□□ -0.45
SLIRP-211ENST00000557623 TSSK1BQ9BXA7 367 aa12.24□□□□□ -0.45
SLIRP-211ENST00000557623 EPB41L5Q9HCM4 733 aa12.24□□□□□ -0.45
SLIRP-211ENST00000557623 SATB2Q9UPW6 733 aa12.24□□□□□ -0.45
SLIRP-211ENST00000557623 WDR37Q9Y2I8 494 aa12.24□□□□□ -0.45
SLIRP-211ENST00000557623 PCDHGA8Q9Y5G5 932 aa12.24□□□□□ -0.45
SLIRP-211ENST00000557623 FAM237BA0A1B0GVD1 139 aa12.23□□□□□ -0.45
SLIRP-211ENST00000557623 OR52A4PA6NMU1 304 aa12.23□□□□□ -0.45
SLIRP-211ENST00000557623 GOLGA8MH3BSY2 632 aa12.23□□□□□ -0.45
SLIRP-211ENST00000557623 PFDN6O15212 129 aa12.23□□□□□ -0.45
SLIRP-211ENST00000557623 CD3EAPO15446 510 aaKnown RBP12.23□□□□□ -0.45
SLIRP-211ENST00000557623 DXOO77932 396 aaKnown RBP12.23□□□□□ -0.45
SLIRP-211ENST00000557623 MPOP05164 745 aa12.23□□□□□ -0.45
SLIRP-211ENST00000557623 RBMS1P29558 406 aaKnown RBP12.23□□□□□ -0.45
SLIRP-211ENST00000557623 PTGIRP43119 386 aa12.23□□□□□ -0.45
SLIRP-211ENST00000557623 LIMK2P53671 638 aa12.23□□□□□ -0.45
SLIRP-211ENST00000557623 RPA4Q13156 261 aa12.23□□□□□ -0.45
SLIRP-211ENST00000557623 RPE65Q16518 533 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms