RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 KEAP1Q14145 624 aa1.67□□□□□ -2.14
HIF1A-212ENST00000557538 MELKQ14680 651 aa1.67□□□□□ -2.14
HIF1A-212ENST00000557538 PDLIM3Q53GG5 364 aaPredicted RBP1.67□□□□□ -2.14
HIF1A-212ENST00000557538 CCNYL2Q5T2Q4 361 aa1.67□□□□□ -2.14
HIF1A-212ENST00000557538 EEF1A1P5Q5VTE0 462 aa1.67□□□□□ -2.14
HIF1A-212ENST00000557538 KRT80Q6KB66 452 aa1.67□□□□□ -2.14
HIF1A-212ENST00000557538 CTR9Q6PD62 1173 aa1.67□□□□□ -2.14
HIF1A-212ENST00000557538 PLEKHM3Q6ZWE6 761 aa1.67□□□□□ -2.14
HIF1A-212ENST00000557538 GPALPP1Q8IXQ4 340 aa1.67□□□□□ -2.14
HIF1A-212ENST00000557538 ZNF713Q8N859 430 aaPredicted RBP1.67□□□□□ -2.14
HIF1A-212ENST00000557538 POGLUT1Q8NBL1 392 aa1.67□□□□□ -2.14
HIF1A-212ENST00000557538 EXD1Q8NHP7 514 aa1.67□□□□□ -2.14
HIF1A-212ENST00000557538 CCDC26Q8TAB7 109 aa1.67□□□□□ -2.14
HIF1A-212ENST00000557538 ZNF606Q8WXB4 792 aa1.67□□□□□ -2.14
HIF1A-212ENST00000557538 JAKMIP2Q96AA8 810 aa1.67□□□□□ -2.14
HIF1A-212ENST00000557538 GRAMD2BQ96HH9 432 aa1.67□□□□□ -2.14
HIF1A-212ENST00000557538 DDX25Q9UHL0 483 aaKnown RBP1.67□□□□□ -2.14
HIF1A-212ENST00000557538 ZCWPW2A0A1B0GU75 182 aa1.67□□□□□ -2.14
HIF1A-212ENST00000557538 KDM4EB2RXH2 506 aaPredicted RBP1.67□□□□□ -2.14
HIF1A-212ENST00000557538 PLOD2O00469 737 aa1.67□□□□□ -2.14
HIF1A-212ENST00000557538 HS3ST1O14792 307 aa1.67□□□□□ -2.14
HIF1A-212ENST00000557538 SLC16A5O15375 505 aa1.67□□□□□ -2.14
HIF1A-212ENST00000557538 ZIC3O60481 467 aa1.67□□□□□ -2.14
HIF1A-212ENST00000557538 ATP2C2O75185 946 aa1.67□□□□□ -2.14
HIF1A-212ENST00000557538 SERPINI2O75830 405 aa1.67□□□□□ -2.14
HIF1A-212ENST00000557538 KRT36O76013 467 aa1.67□□□□□ -2.14
HIF1A-212ENST00000557538 RECQL5O94762 991 aaPredicted RBP1.67□□□□□ -2.14
HIF1A-212ENST00000557538 FAM106CPP0CH98 169 aa1.67□□□□□ -2.14
HIF1A-212ENST00000557538 CCNCP24863 283 aa1.67□□□□□ -2.14
HIF1A-212ENST00000557538 OAS2P29728 719 aaKnown RBP1.67□□□□□ -2.14
HIF1A-212ENST00000557538 CCR3P51677 355 aa1.67□□□□□ -2.14
HIF1A-212ENST00000557538 GALCP54803 685 aa1.67□□□□□ -2.14
HIF1A-212ENST00000557538 CSE1LP55060 971 aaKnown RBP1.67□□□□□ -2.14
HIF1A-212ENST00000557538 TFCP2Q12800 502 aa1.67□□□□□ -2.14
HIF1A-212ENST00000557538 CDC16Q13042 620 aa1.67□□□□□ -2.14
HIF1A-212ENST00000557538 ZNF628Q5EBL2 1059 aa1.67□□□□□ -2.14
HIF1A-212ENST00000557538 ZNF449Q6P9G9 518 aa1.67□□□□□ -2.14
HIF1A-212ENST00000557538 GFRALQ6UXV0 394 aa1.67□□□□□ -2.14
HIF1A-212ENST00000557538 EFCAB13Q8IY85 973 aa1.67□□□□□ -2.14
HIF1A-212ENST00000557538 SCYL3Q8IZE3 742 aa1.67□□□□□ -2.14
HIF1A-212ENST00000557538 OR8H1Q8NGG4 311 aa1.67□□□□□ -2.14
HIF1A-212ENST00000557538 TAS1R2Q8TE23 839 aa1.67□□□□□ -2.14
HIF1A-212ENST00000557538 SMPDL3BQ92485 455 aa1.67□□□□□ -2.14
HIF1A-212ENST00000557538 ABTB1Q969K4 478 aaPredicted RBP1.67□□□□□ -2.14
HIF1A-212ENST00000557538 DGAT2Q96PD7 388 aa1.67□□□□□ -2.14
HIF1A-212ENST00000557538 GCNAQ96QF7 691 aa1.67□□□□□ -2.14
HIF1A-212ENST00000557538 NEURL2Q9BR09 285 aa1.67□□□□□ -2.14
HIF1A-212ENST00000557538 POLDIP3Q9BY77 421 aaKnown RBP1.67□□□□□ -2.14
HIF1A-212ENST00000557538 RBM38Q9H0Z9 239 aaKnown RBP1.67□□□□□ -2.14
HIF1A-212ENST00000557538 WNT5BQ9H1J7 359 aa1.67□□□□□ -2.14
HIF1A-212ENST00000557538 SH3GLB2Q9NR46 395 aa1.67□□□□□ -2.14
HIF1A-212ENST00000557538 MBNL1Q9NR56 388 aaKnown RBP1.67□□□□□ -2.14
HIF1A-212ENST00000557538 CFDP1Q9UEE9 299 aaPredicted RBP1.67□□□□□ -2.14
HIF1A-212ENST00000557538 SIX4Q9UIU6 781 aa1.67□□□□□ -2.14
HIF1A-212ENST00000557538 TUBE1Q9UJT0 475 aa1.67□□□□□ -2.14
HIF1A-212ENST00000557538 RPS6KA6Q9UK32 745 aa1.67□□□□□ -2.14
HIF1A-212ENST00000557538 PADI3Q9ULW8 664 aa1.67□□□□□ -2.14
HIF1A-212ENST00000557538 NFS1Q9Y697 457 aa1.67□□□□□ -2.14
HIF1A-212ENST00000557538 TTC3P53804 2025 aa1.67□□□□□ -2.14
HIF1A-212ENST00000557538 NINLQ9Y2I6 1382 aa1.67□□□□□ -2.14
HIF1A-212ENST00000557538 LACTBL1A8MY62 500 aa1.67□□□□□ -2.14
HIF1A-212ENST00000557538 MED24O75448 989 aa1.67□□□□□ -2.14
HIF1A-212ENST00000557538 PDE9AO76083 593 aa1.67□□□□□ -2.14
HIF1A-212ENST00000557538 CAMTA2O94983 1202 aa1.67□□□□□ -2.14
HIF1A-212ENST00000557538 NTN1O95631 604 aa1.67□□□□□ -2.14
HIF1A-212ENST00000557538 OLFM2O95897 454 aa1.67□□□□□ -2.14
HIF1A-212ENST00000557538 CRYABP02511 175 aaKnown RBP1.67□□□□□ -2.14
HIF1A-212ENST00000557538 HSP90AB1P08238 724 aaKnown RBP1.67□□□□□ -2.14
HIF1A-212ENST00000557538 FCGR1AP12314 374 aa1.67□□□□□ -2.14
HIF1A-212ENST00000557538 GP1BBP13224 206 aa1.67□□□□□ -2.14
HIF1A-212ENST00000557538 CYP11B2P19099 503 aa1.67□□□□□ -2.14
HIF1A-212ENST00000557538 SLC6A6P31641 620 aa1.67□□□□□ -2.14
HIF1A-212ENST00000557538 MFAP4P55083 255 aa1.67□□□□□ -2.14
HIF1A-212ENST00000557538 TUBA1BP68363 451 aa1.67□□□□□ -2.14
HIF1A-212ENST00000557538 CDK3Q00526 305 aa1.67□□□□□ -2.14
HIF1A-212ENST00000557538 FOXM1Q08050 763 aa1.67□□□□□ -2.14
HIF1A-212ENST00000557538 SNTB1Q13884 538 aaKnown RBP1.67□□□□□ -2.14
HIF1A-212ENST00000557538 PTPRCAPQ14761 206 aa1.67□□□□□ -2.14
HIF1A-212ENST00000557538 TNIP1Q15025 636 aa1.67□□□□□ -2.14
HIF1A-212ENST00000557538 RASA2Q15283 850 aa1.67□□□□□ -2.14
HIF1A-212ENST00000557538 CALCRLQ16602 461 aa1.67□□□□□ -2.14
HIF1A-212ENST00000557538 TTC19Q6DKK2 380 aaPredicted RBP1.67□□□□□ -2.14
HIF1A-212ENST00000557538 Q6ZTK2 550 aa1.67□□□□□ -2.14
HIF1A-212ENST00000557538 MCM10Q7L590 875 aa1.67□□□□□ -2.14
HIF1A-212ENST00000557538 LDB1Q86U70 411 aaPredicted RBP1.67□□□□□ -2.14
HIF1A-212ENST00000557538 NUDT13Q86X67 352 aa1.67□□□□□ -2.14
HIF1A-212ENST00000557538 ADHFE1Q8IWW8 467 aa1.67□□□□□ -2.14
HIF1A-212ENST00000557538 DCP1BQ8IZD4 617 aaKnown RBP1.67□□□□□ -2.14
HIF1A-212ENST00000557538 DSELQ8IZU8 1212 aa1.67□□□□□ -2.14
HIF1A-212ENST00000557538 MUC20Q8N307 709 aaPredicted RBP1.67□□□□□ -2.14
HIF1A-212ENST00000557538 EMC1Q8N766 993 aa1.67□□□□□ -2.14
HIF1A-212ENST00000557538 LINC00469Q8N7U9 141 aa1.67□□□□□ -2.14
HIF1A-212ENST00000557538 C9orf106Q8NAJ2 232 aa1.67□□□□□ -2.14
HIF1A-212ENST00000557538 AVL9Q8NBF6 648 aa1.67□□□□□ -2.14
HIF1A-212ENST00000557538 OR8K5Q8NH50 307 aa1.67□□□□□ -2.14
HIF1A-212ENST00000557538 OR5R1Q8NH85 324 aa1.67□□□□□ -2.14
HIF1A-212ENST00000557538 C9orf43Q8TAL5 461 aaPredicted RBP1.67□□□□□ -2.14
HIF1A-212ENST00000557538 SNX21Q969T3 373 aa1.67□□□□□ -2.14
HIF1A-212ENST00000557538 SGK494Q96LW2 274 aa1.67□□□□□ -2.14
HIF1A-212ENST00000557538 PI4K2AQ9BTU6 479 aa1.67□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms