RNA–Protein interactions for RNA: ENST00000557442.5

HNRNPC-232, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 1,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-232ENST00000557442 ZNF470Q6ECI4 717 aa10.38□□□□□ -0.75
HNRNPC-232ENST00000557442 TMPRSS7Q7RTY8 843 aa10.38□□□□□ -0.75
HNRNPC-232ENST00000557442 ZNF438Q7Z4V0 828 aa10.38□□□□□ -0.75
HNRNPC-232ENST00000557442 TMEM135Q86UB9 458 aa10.38□□□□□ -0.75
HNRNPC-232ENST00000557442 TMPRSS12Q86WS5 348 aa10.38□□□□□ -0.75
HNRNPC-232ENST00000557442 ZNF761Q86XN6 746 aaPredicted RBP10.38□□□□□ -0.75
HNRNPC-232ENST00000557442 MARCH9Q86YJ5 346 aa10.38□□□□□ -0.75
HNRNPC-232ENST00000557442 AVL9Q8NBF6 648 aa10.38□□□□□ -0.75
HNRNPC-232ENST00000557442 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.38□□□□□ -0.75
HNRNPC-232ENST00000557442 MNS1Q8NEH6 495 aa10.38□□□□□ -0.75
HNRNPC-232ENST00000557442 WDR48Q8TAF3 677 aa10.38□□□□□ -0.75
HNRNPC-232ENST00000557442 CXorf40BQ96DE9 158 aa10.38□□□□□ -0.75
HNRNPC-232ENST00000557442 LINC00615Q96LM1 132 aaPredicted RBP10.38□□□□□ -0.75
HNRNPC-232ENST00000557442 FCRL3Q96P31 734 aaPredicted RBP10.38□□□□□ -0.75
HNRNPC-232ENST00000557442 GFM1Q96RP9 751 aaKnown RBP10.38□□□□□ -0.75
HNRNPC-232ENST00000557442 CCM2Q9BSQ5 444 aa10.38□□□□□ -0.75
HNRNPC-232ENST00000557442 TUBB2BQ9BVA1 445 aa10.38□□□□□ -0.75
HNRNPC-232ENST00000557442 ZMYND15Q9H091 742 aa10.38□□□□□ -0.75
HNRNPC-232ENST00000557442 SARS2Q9NP81 518 aaKnown RBP10.38□□□□□ -0.75
HNRNPC-232ENST00000557442 SCHIP1Q9P0W5 487 aaPredicted RBP10.38□□□□□ -0.75
HNRNPC-232ENST00000557442 WHRNQ9P202 907 aa10.38□□□□□ -0.75
HNRNPC-232ENST00000557442 CPNE7Q9UBL6 633 aa10.38□□□□□ -0.75
HNRNPC-232ENST00000557442 CHMP2BQ9UQN3 213 aa10.38□□□□□ -0.75
HNRNPC-232ENST00000557442 WDR37Q9Y2I8 494 aa10.38□□□□□ -0.75
HNRNPC-232ENST00000557442 NEUROG3Q9Y4Z2 214 aa10.38□□□□□ -0.75
HNRNPC-232ENST00000557442 ACACAQ13085 2346 aa10.38□□□□□ -0.75
HNRNPC-232ENST00000557442 ASPMQ8IZT6 3477 aa10.38□□□□□ -0.75
HNRNPC-232ENST00000557442 ZCWPW2A0A1B0GU75 182 aa10.37□□□□□ -0.75
HNRNPC-232ENST00000557442 A0A1W2PQM1 296 aa10.37□□□□□ -0.75
HNRNPC-232ENST00000557442 CTAGE15A4D2H0 777 aa10.37□□□□□ -0.75
HNRNPC-232ENST00000557442 D6RAR5 112 aa10.37□□□□□ -0.75
HNRNPC-232ENST00000557442 F8W8V4 182 aa10.37□□□□□ -0.75
HNRNPC-232ENST00000557442 PRMT5O14744 637 aaPredicted RBP10.37□□□□□ -0.75
HNRNPC-232ENST00000557442 PFDN6O15212 129 aa10.37□□□□□ -0.75
HNRNPC-232ENST00000557442 TP73O15350 636 aa10.37□□□□□ -0.75
HNRNPC-232ENST00000557442 ZW10O43264 779 aa10.37□□□□□ -0.75
HNRNPC-232ENST00000557442 NDUFS3O75489 264 aa10.37□□□□□ -0.75
HNRNPC-232ENST00000557442 TCEA3O75764 348 aa10.37□□□□□ -0.75
HNRNPC-232ENST00000557442 MT-CO3P00414 261 aa10.37□□□□□ -0.75
HNRNPC-232ENST00000557442 VIPP01282 170 aa10.37□□□□□ -0.75
HNRNPC-232ENST00000557442 CTAGE8P0CG41 777 aa10.37□□□□□ -0.75
HNRNPC-232ENST00000557442 JUPP14923 745 aa10.37□□□□□ -0.75
HNRNPC-232ENST00000557442 OGNP20774 298 aaKnown RBP10.37□□□□□ -0.75
HNRNPC-232ENST00000557442 ALDH4A1P30038 563 aa10.37□□□□□ -0.75
HNRNPC-232ENST00000557442 ELK3P41970 407 aa10.37□□□□□ -0.75
HNRNPC-232ENST00000557442 ARCN1P48444 511 aaKnown RBP10.37□□□□□ -0.75
HNRNPC-232ENST00000557442 EIF3BP55884 814 aaKnown RBP10.37□□□□□ -0.75
HNRNPC-232ENST00000557442 OR1D5P58170 312 aa10.37□□□□□ -0.75
HNRNPC-232ENST00000557442 CCL7P80098 99 aa10.37□□□□□ -0.75
HNRNPC-232ENST00000557442 THOC5Q13769 683 aaKnown RBP10.37□□□□□ -0.75
HNRNPC-232ENST00000557442 BOP1Q14137 746 aaKnown RBP10.37□□□□□ -0.75
HNRNPC-232ENST00000557442 NR1D2Q14995 579 aa10.37□□□□□ -0.75
HNRNPC-232ENST00000557442 CLCA4Q14CN2 919 aa10.37□□□□□ -0.75
HNRNPC-232ENST00000557442 LONRF1Q17RB8 773 aa10.37□□□□□ -0.75
HNRNPC-232ENST00000557442 TYSND1Q2T9J0 566 aa10.37□□□□□ -0.75
HNRNPC-232ENST00000557442 AMZ1Q400G9 498 aa10.37□□□□□ -0.75
HNRNPC-232ENST00000557442 SYTL3Q4VX76 610 aa10.37□□□□□ -0.75
HNRNPC-232ENST00000557442 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.37□□□□□ -0.75
HNRNPC-232ENST00000557442 RNF187Q5TA31 235 aaPredicted RBP10.37□□□□□ -0.75
HNRNPC-232ENST00000557442 METRNLQ641Q3 311 aa10.37□□□□□ -0.75
HNRNPC-232ENST00000557442 DUPD1Q68J44 220 aa10.37□□□□□ -0.75
HNRNPC-232ENST00000557442 NEPROQ6NW34 567 aa10.37□□□□□ -0.75
HNRNPC-232ENST00000557442 ABRAXAS1Q6UWZ7 409 aa10.37□□□□□ -0.75
HNRNPC-232ENST00000557442 WASH2PQ6VEQ5 465 aa10.37□□□□□ -0.75
HNRNPC-232ENST00000557442 RBM44Q6ZP01 1051 aaKnown RBP10.37□□□□□ -0.75
HNRNPC-232ENST00000557442 SDCCAG8Q86SQ7 713 aaPredicted RBP10.37□□□□□ -0.75
HNRNPC-232ENST00000557442 CTAGE6Q86UF2 777 aa10.37□□□□□ -0.75
HNRNPC-232ENST00000557442 CTAGE4Q8IX94 777 aa10.37□□□□□ -0.75
HNRNPC-232ENST00000557442 CFAP206Q8IYR0 622 aa10.37□□□□□ -0.75
HNRNPC-232ENST00000557442 LILRA3Q8N6C8 439 aaPredicted RBP10.37□□□□□ -0.75
HNRNPC-232ENST00000557442 ELMO1Q92556 727 aa10.37□□□□□ -0.75
HNRNPC-232ENST00000557442 CFAP36Q96G28 342 aa10.37□□□□□ -0.75
HNRNPC-232ENST00000557442 DEPDC7Q96QD5 511 aa10.37□□□□□ -0.75
HNRNPC-232ENST00000557442 SLC38A3Q99624 504 aa10.37□□□□□ -0.75
HNRNPC-232ENST00000557442 EBNA1BP2Q99848 306 aaKnown RBP10.37□□□□□ -0.75
HNRNPC-232ENST00000557442 NAT9Q9BTE0 207 aa10.37□□□□□ -0.75
HNRNPC-232ENST00000557442 TSSK1BQ9BXA7 367 aa10.37□□□□□ -0.75
HNRNPC-232ENST00000557442 WWP1Q9H0M0 922 aa10.37□□□□□ -0.75
HNRNPC-232ENST00000557442 LRRN3Q9H3W5 708 aa10.37□□□□□ -0.75
HNRNPC-232ENST00000557442 COG4Q9H9E3 785 aa10.37□□□□□ -0.75
HNRNPC-232ENST00000557442 WASH6PQ9NQA3 447 aa10.37□□□□□ -0.75
HNRNPC-232ENST00000557442 C20orf96Q9NUD7 363 aaPredicted RBP10.37□□□□□ -0.75
HNRNPC-232ENST00000557442 POT1Q9NUX5 634 aa10.37□□□□□ -0.75
HNRNPC-232ENST00000557442 IMP3Q9NV31 184 aaKnown RBP10.37□□□□□ -0.75
HNRNPC-232ENST00000557442 KCNK4Q9NYG8 393 aa10.37□□□□□ -0.75
HNRNPC-232ENST00000557442 ZNF624Q9P2J8 865 aaPredicted RBP10.37□□□□□ -0.75
HNRNPC-232ENST00000557442 GNPTGQ9UJJ9 305 aa10.37□□□□□ -0.75
HNRNPC-232ENST00000557442 ACSL5Q9ULC5 683 aa10.37□□□□□ -0.75
HNRNPC-232ENST00000557442 ANKRD11Q6UB99 2663 aaPredicted RBP10.37□□□□□ -0.75
HNRNPC-232ENST00000557442 C17orf113A0A1B0GUU1 675 aa10.36□□□□□ -0.75
HNRNPC-232ENST00000557442 NTN3O00634 580 aaPredicted RBP10.36□□□□□ -0.75
HNRNPC-232ENST00000557442 CSO75390 466 aaKnown RBP10.36□□□□□ -0.75
HNRNPC-232ENST00000557442 TTC4O95801 387 aa10.36□□□□□ -0.75
HNRNPC-232ENST00000557442 GSTM1P09488 218 aa10.36□□□□□ -0.75
HNRNPC-232ENST00000557442 MTHFD1P11586 935 aaKnown RBP10.36□□□□□ -0.75
HNRNPC-232ENST00000557442 ITGB6P18564 788 aa10.36□□□□□ -0.75
HNRNPC-232ENST00000557442 XRCC1P18887 633 aaPredicted RBP10.36□□□□□ -0.75
HNRNPC-232ENST00000557442 SLC19A1P41440 591 aa10.36□□□□□ -0.75
HNRNPC-232ENST00000557442 MAPK9P45984 424 aa10.36□□□□□ -0.75
HNRNPC-232ENST00000557442 GPR3P46089 330 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms