RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 DUXAA6NLW8 204 aa8.74□□□□□ -1.01
SYNE3-205ENST00000557275 SELENOVP59797 346 aa8.74□□□□□ -1.01
SYNE3-205ENST00000557275 PPP3CAQ08209 521 aa8.74□□□□□ -1.01
SYNE3-205ENST00000557275 GIT2Q14161 759 aa8.74□□□□□ -1.01
SYNE3-205ENST00000557275 LRRN1Q6UXK5 716 aa8.74□□□□□ -1.01
SYNE3-205ENST00000557275 FAM83HQ6ZRV2 1179 aaPredicted RBP8.74□□□□□ -1.01
SYNE3-205ENST00000557275 RELL1Q8IUW5 271 aa8.74□□□□□ -1.01
SYNE3-205ENST00000557275 UBA3Q8TBC4 463 aa8.74□□□□□ -1.01
SYNE3-205ENST00000557275 ACSS3Q9H6R3 686 aa8.74□□□□□ -1.01
SYNE3-205ENST00000557275 NYAP2Q9P242 653 aa8.74□□□□□ -1.01
SYNE3-205ENST00000557275 CACNB4O00305 520 aaPredicted RBP8.74□□□□□ -1.01
SYNE3-205ENST00000557275 NME6O75414 186 aaPredicted RBP8.74□□□□□ -1.01
SYNE3-205ENST00000557275 GNPDA1P46926 289 aa8.74□□□□□ -1.01
SYNE3-205ENST00000557275 SUSD6Q92537 303 aa8.74□□□□□ -1.01
SYNE3-205ENST00000557275 TRIM43Q96BQ3 446 aaPredicted RBP8.74□□□□□ -1.01
SYNE3-205ENST00000557275 LRRC46Q96FV0 321 aa8.74□□□□□ -1.01
SYNE3-205ENST00000557275 OMDQ99983 421 aa8.74□□□□□ -1.01
SYNE3-205ENST00000557275 BIN3Q9NQY0 253 aa8.74□□□□□ -1.01
SYNE3-205ENST00000557275 CPS1P31327 1500 aa8.74□□□□□ -1.01
SYNE3-205ENST00000557275 NDUFS2O75306 463 aa8.74□□□□□ -1.01
SYNE3-205ENST00000557275 KHKP50053 298 aa8.74□□□□□ -1.01
SYNE3-205ENST00000557275 HEPACAMQ14CZ8 416 aa8.74□□□□□ -1.01
SYNE3-205ENST00000557275 C12orf40Q86WS4 652 aa8.74□□□□□ -1.01
SYNE3-205ENST00000557275 CHPT1Q8WUD6 406 aa8.74□□□□□ -1.01
SYNE3-205ENST00000557275 NCSTNQ92542 709 aa8.74□□□□□ -1.01
SYNE3-205ENST00000557275 NME7Q9Y5B8 376 aa8.74□□□□□ -1.01
SYNE3-205ENST00000557275 SPIN1Q9Y657 262 aaPredicted RBP8.74□□□□□ -1.01
SYNE3-205ENST00000557275 SLC35F4A4IF30 521 aa8.74□□□□□ -1.01
SYNE3-205ENST00000557275 FPGTO14772 594 aa8.74□□□□□ -1.01
SYNE3-205ENST00000557275 BCAS1O75363 584 aaPredicted RBP8.74□□□□□ -1.01
SYNE3-205ENST00000557275 AKAP3O75969 853 aa8.74□□□□□ -1.01
SYNE3-205ENST00000557275 CYP4B1P13584 511 aa8.74□□□□□ -1.01
SYNE3-205ENST00000557275 POLR2JP52435 117 aaKnown RBP8.74□□□□□ -1.01
SYNE3-205ENST00000557275 UNC5CLQ8IV45 518 aa8.74□□□□□ -1.01
SYNE3-205ENST00000557275 RNF148Q8N7C7 305 aa8.74□□□□□ -1.01
SYNE3-205ENST00000557275 C8orf48Q96LL4 319 aa8.74□□□□□ -1.01
SYNE3-205ENST00000557275 RNF38Q9H0F5 515 aa8.74□□□□□ -1.01
SYNE3-205ENST00000557275 XPNPEP3Q9NQH7 507 aa8.74□□□□□ -1.01
SYNE3-205ENST00000557275 SLC12A8A0AV02 714 aa8.74□□□□□ -1.01
SYNE3-205ENST00000557275 TNFRSF11BO00300 401 aa8.74□□□□□ -1.01
SYNE3-205ENST00000557275 ITPKBP27987 946 aa8.74□□□□□ -1.01
SYNE3-205ENST00000557275 IFNL1Q8IU54 200 aa8.74□□□□□ -1.01
SYNE3-205ENST00000557275 TMEM126BQ8IUX1 230 aa8.74□□□□□ -1.01
SYNE3-205ENST00000557275 MCOLN2Q8IZK6 566 aa8.74□□□□□ -1.01
SYNE3-205ENST00000557275 NDC1Q9BTX1 674 aa8.74□□□□□ -1.01
SYNE3-205ENST00000557275 B3GNT4Q9C0J1 378 aa8.74□□□□□ -1.01
SYNE3-205ENST00000557275 BRD9Q9H8M2 597 aa8.74□□□□□ -1.01
SYNE3-205ENST00000557275 S100A14Q9HCY8 104 aa8.74□□□□□ -1.01
SYNE3-205ENST00000557275 SIX4Q9UIU6 781 aa8.74□□□□□ -1.01
SYNE3-205ENST00000557275 BTNL10A8MVZ5 291 aa8.74□□□□□ -1.01
SYNE3-205ENST00000557275 IL12BP29460 328 aa8.74□□□□□ -1.01
SYNE3-205ENST00000557275 ADIGQ0VDE8 80 aa8.74□□□□□ -1.01
SYNE3-205ENST00000557275 MTFR2Q6P444 385 aa8.74□□□□□ -1.01
SYNE3-205ENST00000557275 TM9SF2Q99805 663 aa8.74□□□□□ -1.01
SYNE3-205ENST00000557275 SLC30A2Q9BRI3 323 aa8.74□□□□□ -1.01
SYNE3-205ENST00000557275 COPS4Q9BT78 406 aa8.74□□□□□ -1.01
SYNE3-205ENST00000557275 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.74□□□□□ -1.01
SYNE3-205ENST00000557275 A8MXE2 369 aa8.74□□□□□ -1.01
SYNE3-205ENST00000557275 IFI30P13284 250 aa8.74□□□□□ -1.01
SYNE3-205ENST00000557275 ADRA1DP25100 572 aa8.74□□□□□ -1.01
SYNE3-205ENST00000557275 RYKP34925 604 aa8.74□□□□□ -1.01
SYNE3-205ENST00000557275 SRSF11Q05519 484 aaKnown RBP8.74□□□□□ -1.01
SYNE3-205ENST00000557275 CD47Q08722 323 aa8.74□□□□□ -1.01
SYNE3-205ENST00000557275 RAB41Q5JT25 222 aa8.74□□□□□ -1.01
SYNE3-205ENST00000557275 IFNLR1Q8IU57 520 aaPredicted RBP8.74□□□□□ -1.01
SYNE3-205ENST00000557275 SETD6Q8TBK2 473 aa8.74□□□□□ -1.01
SYNE3-205ENST00000557275 ZFP14Q9HCL3 533 aa8.74□□□□□ -1.01
SYNE3-205ENST00000557275 MIOSQ9NXC5 875 aa8.74□□□□□ -1.01
SYNE3-205ENST00000557275 PPP5CP53041 499 aa8.74□□□□□ -1.01
SYNE3-205ENST00000557275 MAPK10P53779 464 aa8.74□□□□□ -1.01
SYNE3-205ENST00000557275 SLC12A3P55017 1021 aa8.74□□□□□ -1.01
SYNE3-205ENST00000557275 S100A10P60903 97 aa8.74□□□□□ -1.01
SYNE3-205ENST00000557275 UBQLNLQ8IYU4 475 aa8.74□□□□□ -1.01
SYNE3-205ENST00000557275 CCDC24Q8N4L8 307 aa8.74□□□□□ -1.01
SYNE3-205ENST00000557275 SMARCD2Q92925 531 aa8.74□□□□□ -1.01
SYNE3-205ENST00000557275 EPYCQ99645 322 aa8.74□□□□□ -1.01
SYNE3-205ENST00000557275 MAPKAP1Q9BPZ7 522 aa8.74□□□□□ -1.01
SYNE3-205ENST00000557275 HTR3EA5X5Y0 456 aa8.73□□□□□ -1.01
SYNE3-205ENST00000557275 MT-ND2P03891 347 aa8.73□□□□□ -1.01
SYNE3-205ENST00000557275 RABL3Q5HYI8 236 aa8.73□□□□□ -1.01
SYNE3-205ENST00000557275 ZNF529Q6P280 563 aa8.73□□□□□ -1.01
SYNE3-205ENST00000557275 ZNF662Q6ZS27 426 aa8.73□□□□□ -1.01
SYNE3-205ENST00000557275 RAD9AQ99638 391 aa8.73□□□□□ -1.01
SYNE3-205ENST00000557275 TMEM100Q9NV29 134 aa8.73□□□□□ -1.01
SYNE3-205ENST00000557275 EP300Q09472 2414 aaPredicted RBP8.73□□□□□ -1.01
SYNE3-205ENST00000557275 CD72P21854 359 aa8.73□□□□□ -1.01
SYNE3-205ENST00000557275 MGAT1P26572 445 aa8.73□□□□□ -1.01
SYNE3-205ENST00000557275 PRKAG1P54619 331 aa8.73□□□□□ -1.01
SYNE3-205ENST00000557275 MPP1Q00013 466 aa8.73□□□□□ -1.01
SYNE3-205ENST00000557275 SPP2Q13103 211 aa8.73□□□□□ -1.01
SYNE3-205ENST00000557275 ARL14Q8N4G2 192 aa8.73□□□□□ -1.01
SYNE3-205ENST00000557275 C12orf45Q8N5I9 185 aaPredicted RBP8.73□□□□□ -1.01
SYNE3-205ENST00000557275 ZNF334Q9HCZ1 680 aaPredicted RBP8.73□□□□□ -1.01
SYNE3-205ENST00000557275 FRMPD1Q5SYB0 1578 aa8.73□□□□□ -1.01
SYNE3-205ENST00000557275 ANXA8P13928 327 aa8.73□□□□□ -1.01
SYNE3-205ENST00000557275 MTMR2Q13614 643 aa8.73□□□□□ -1.01
SYNE3-205ENST00000557275 KCND1Q9NSA2 647 aa8.73□□□□□ -1.01
SYNE3-205ENST00000557275 TAS2R10Q9NYW0 307 aa8.73□□□□□ -1.01
SYNE3-205ENST00000557275 NOP16Q9Y3C1 178 aaKnown RBP8.73□□□□□ -1.01
SYNE3-205ENST00000557275 H0YGN5 161 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms