RNA–Protein interactions for RNA: ENST00000556951.5

PSEN1-219, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-219ENST00000556951 LRRN4Q8WUT4 740 aa12.55□□□□□ -0.4
PSEN1-219ENST00000556951 ECHDC3Q96DC8 303 aa12.55□□□□□ -0.4
PSEN1-219ENST00000556951 TCTN2Q96GX1 697 aa12.55□□□□□ -0.4
PSEN1-219ENST00000556951 COQ10AQ96MF6 247 aa12.55□□□□□ -0.4
PSEN1-219ENST00000556951 SPATA13Q96N96 652 aa12.55□□□□□ -0.4
PSEN1-219ENST00000556951 TEFMQ96QE5 360 aaKnown RBP12.55□□□□□ -0.4
PSEN1-219ENST00000556951 VAT1Q99536 393 aa12.55□□□□□ -0.4
PSEN1-219ENST00000556951 EFHD1Q9BUP0 239 aa12.55□□□□□ -0.4
PSEN1-219ENST00000556951 TEX101Q9BY14 249 aa12.55□□□□□ -0.4
PSEN1-219ENST00000556951 FUT8Q9BYC5 575 aa12.55□□□□□ -0.4
PSEN1-219ENST00000556951 VIPAS39Q9H9C1 493 aa12.55□□□□□ -0.4
PSEN1-219ENST00000556951 PDFQ9HBH1 243 aa12.55□□□□□ -0.4
PSEN1-219ENST00000556951 PRDM8Q9NQV8 689 aa12.55□□□□□ -0.4
PSEN1-219ENST00000556951 FBXO8Q9NRD0 319 aa12.55□□□□□ -0.4
PSEN1-219ENST00000556951 TRHDEQ9UKU6 1024 aa12.55□□□□□ -0.4
PSEN1-219ENST00000556951 SHOC2Q9UQ13 582 aa12.55□□□□□ -0.4
PSEN1-219ENST00000556951 DCHS2Q6V1P9 2916 aa12.55□□□□□ -0.4
PSEN1-219ENST00000556951 A8MX80 341 aa12.54□□□□□ -0.4
PSEN1-219ENST00000556951 J3KR12 359 aa12.54□□□□□ -0.4
PSEN1-219ENST00000556951 FDFT1P37268 417 aa12.54□□□□□ -0.4
PSEN1-219ENST00000556951 MAGEA6P43360 314 aa12.54□□□□□ -0.4
PSEN1-219ENST00000556951 CSNK1DP48730 415 aa12.54□□□□□ -0.4
PSEN1-219ENST00000556951 POLD2P49005 469 aa12.54□□□□□ -0.4
PSEN1-219ENST00000556951 PAPOLAP51003 745 aaKnown RBP12.54□□□□□ -0.4
PSEN1-219ENST00000556951 MC1RQ01726 317 aa12.54□□□□□ -0.4
PSEN1-219ENST00000556951 DHX9Q08211 1270 aaKnown RBP12.54□□□□□ -0.4
PSEN1-219ENST00000556951 WASHC5Q12768 1159 aa12.54□□□□□ -0.4
PSEN1-219ENST00000556951 CASP8Q14790 479 aa12.54□□□□□ -0.4
PSEN1-219ENST00000556951 GRM3Q14832 879 aa12.54□□□□□ -0.4
PSEN1-219ENST00000556951 PARP6Q2NL67 630 aa12.54□□□□□ -0.4
PSEN1-219ENST00000556951 PARP15Q460N3 678 aa12.54□□□□□ -0.4
PSEN1-219ENST00000556951 TIGD7Q6NT04 549 aaPredicted RBP12.54□□□□□ -0.4
PSEN1-219ENST00000556951 SLC30A9Q6PML9 568 aa12.54□□□□□ -0.4
PSEN1-219ENST00000556951 ASB18Q6ZVZ8 466 aa12.54□□□□□ -0.4
PSEN1-219ENST00000556951 DPPA4Q7L190 304 aa12.54□□□□□ -0.4
PSEN1-219ENST00000556951 SRLQ86TD4 932 aa12.54□□□□□ -0.4
PSEN1-219ENST00000556951 ATPAF2Q8N5M1 289 aa12.54□□□□□ -0.4
PSEN1-219ENST00000556951 NAT8LQ8N9F0 302 aa12.54□□□□□ -0.4
PSEN1-219ENST00000556951 CCDC110Q8TBZ0 833 aa12.54□□□□□ -0.4
PSEN1-219ENST00000556951 CPT1BQ92523 772 aa12.54□□□□□ -0.4
PSEN1-219ENST00000556951 FATE1Q969F0 183 aa12.54□□□□□ -0.4
PSEN1-219ENST00000556951 KIAA1143Q96AT1 154 aaPredicted RBP12.54□□□□□ -0.4
PSEN1-219ENST00000556951 DPYSL5Q9BPU6 564 aa12.54□□□□□ -0.4
PSEN1-219ENST00000556951 GSDMCQ9BYG8 508 aa12.54□□□□□ -0.4
PSEN1-219ENST00000556951 TXLNGYQ9BZA5 131 aa12.54□□□□□ -0.4
PSEN1-219ENST00000556951 WDR26Q9H7D7 661 aa12.54□□□□□ -0.4
PSEN1-219ENST00000556951 SUDS3Q9H7L9 328 aaPredicted RBP12.54□□□□□ -0.4
PSEN1-219ENST00000556951 RAB6BQ9NRW1 208 aa12.54□□□□□ -0.4
PSEN1-219ENST00000556951 ERRFI1Q9UJM3 462 aaPredicted RBP12.54□□□□□ -0.4
PSEN1-219ENST00000556951 TLK1Q9UKI8 766 aa12.54□□□□□ -0.4
PSEN1-219ENST00000556951 PHTF1Q9UMS5 762 aa12.54□□□□□ -0.4
PSEN1-219ENST00000556951 SUFUQ9UMX1 484 aa12.54□□□□□ -0.4
PSEN1-219ENST00000556951 ENTPD4Q9Y227 616 aa12.54□□□□□ -0.4
PSEN1-219ENST00000556951 ZNF106Q9H2Y7 1883 aaKnown RBP12.54□□□□□ -0.4
PSEN1-219ENST00000556951 A8MU76 341 aa12.53□□□□□ -0.4
PSEN1-219ENST00000556951 TRAFD1O14545 582 aaPredicted RBP12.53□□□□□ -0.4
PSEN1-219ENST00000556951 MAP2K7O14733 419 aa12.53□□□□□ -0.4
PSEN1-219ENST00000556951 MATN3O15232 486 aa12.53□□□□□ -0.4
PSEN1-219ENST00000556951 ZW10O43264 779 aa12.53□□□□□ -0.4
PSEN1-219ENST00000556951 MAFKO60675 156 aa12.53□□□□□ -0.4
PSEN1-219ENST00000556951 STK17BO94768 372 aa12.53□□□□□ -0.4
PSEN1-219ENST00000556951 MYCLP1P12525 358 aaPredicted RBP12.53□□□□□ -0.4
PSEN1-219ENST00000556951 PTPN3P26045 913 aa12.53□□□□□ -0.4
PSEN1-219ENST00000556951 STAT5AP42229 794 aa12.53□□□□□ -0.4
PSEN1-219ENST00000556951 IFI35P80217 286 aaPredicted RBP12.53□□□□□ -0.4
PSEN1-219ENST00000556951 ILF3Q12906 894 aaKnown RBP eCLIP12.53□□□□□ -0.4
PSEN1-219ENST00000556951 SEPT6Q14141 434 aa12.53□□□□□ -0.4
PSEN1-219ENST00000556951 EIF2S3LQ2VIR3 472 aaKnown RBP12.53□□□□□ -0.4
PSEN1-219ENST00000556951 TEX44Q53QW1 395 aa12.53□□□□□ -0.4
PSEN1-219ENST00000556951 ALS2CLQ60I27 953 aa12.53□□□□□ -0.4
PSEN1-219ENST00000556951 PID1Q7Z2X4 250 aa12.53□□□□□ -0.4
PSEN1-219ENST00000556951 TMC3Q7Z5M5 1100 aa12.53□□□□□ -0.4
PSEN1-219ENST00000556951 MTERF4Q7Z6M4 381 aaKnown RBP12.53□□□□□ -0.4
PSEN1-219ENST00000556951 ZNF761Q86XN6 746 aaPredicted RBP12.53□□□□□ -0.4
PSEN1-219ENST00000556951 ZNF354CQ86Y25 554 aa12.53□□□□□ -0.4
PSEN1-219ENST00000556951 SCARF2Q96GP6 870 aaPredicted RBP12.53□□□□□ -0.4
PSEN1-219ENST00000556951 TUBGCP5Q96RT8 1024 aa12.53□□□□□ -0.4
PSEN1-219ENST00000556951 ETNK1Q9HBU6 452 aa12.53□□□□□ -0.4
PSEN1-219ENST00000556951 KCTD3Q9Y597 815 aa12.53□□□□□ -0.4
PSEN1-219ENST00000556951 TRBV23OR9-2A0A075B6M9 112 aa12.52□□□□□ -0.41
PSEN1-219ENST00000556951 MKRN2OSH3BPM6 223 aa12.52□□□□□ -0.41
PSEN1-219ENST00000556951 KCNK1O00180 336 aa12.52□□□□□ -0.41
PSEN1-219ENST00000556951 METTL18O95568 372 aa12.52□□□□□ -0.41
PSEN1-219ENST00000556951 EML2O95834 649 aa12.52□□□□□ -0.41
PSEN1-219ENST00000556951 JCHAINP01591 159 aa12.52□□□□□ -0.41
PSEN1-219ENST00000556951 ELFN1P0C7U0 828 aa12.52□□□□□ -0.41
PSEN1-219ENST00000556951 ZNF28P17035 718 aa12.52□□□□□ -0.41
PSEN1-219ENST00000556951 GNPDA1P46926 289 aa12.52□□□□□ -0.41
PSEN1-219ENST00000556951 PMS2P54278 862 aa12.52□□□□□ -0.41
PSEN1-219ENST00000556951 GPLD1P80108 840 aa12.52□□□□□ -0.41
PSEN1-219ENST00000556951 BASP1P80723 227 aaKnown RBP12.52□□□□□ -0.41
PSEN1-219ENST00000556951 CBLBQ13191 982 aa12.52□□□□□ -0.41
PSEN1-219ENST00000556951 KCNJ11Q14654 390 aa12.52□□□□□ -0.41
PSEN1-219ENST00000556951 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.52□□□□□ -0.41
PSEN1-219ENST00000556951 ITPRIPL1Q6GPH6 555 aa12.52□□□□□ -0.41
PSEN1-219ENST00000556951 CEACAM20Q6UY09 585 aa12.52□□□□□ -0.41
PSEN1-219ENST00000556951 PPP1R21Q6ZMI0 780 aa12.52□□□□□ -0.41
PSEN1-219ENST00000556951 TRMT10CQ7L0Y3 403 aaKnown RBP12.52□□□□□ -0.41
PSEN1-219ENST00000556951 TMEM135Q86UB9 458 aa12.52□□□□□ -0.41
PSEN1-219ENST00000556951 RELL1Q8IUW5 271 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms