RNA–Protein interactions for RNA: ENST00000556541.1

FOXN3-212, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 388 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-212ENST00000556541 CD200R1Q8TD46 325 aa11.07□□□□□ -0.64
FOXN3-212ENST00000556541 INPP5DQ92835 1189 aa11.07□□□□□ -0.64
FOXN3-212ENST00000556541 CCDC97Q96F63 343 aaPredicted RBP11.07□□□□□ -0.64
FOXN3-212ENST00000556541 PHOX2BQ99453 314 aa11.07□□□□□ -0.64
FOXN3-212ENST00000556541 ELF4Q99607 663 aaPredicted RBP11.07□□□□□ -0.64
FOXN3-212ENST00000556541 NUSAP1Q9BXS6 441 aaKnown RBP11.07□□□□□ -0.64
FOXN3-212ENST00000556541 GSDMCQ9BYG8 508 aa11.07□□□□□ -0.64
FOXN3-212ENST00000556541 SLC13A1Q9BZW2 595 aa11.07□□□□□ -0.64
FOXN3-212ENST00000556541 STMN4Q9H169 189 aaPredicted RBP11.07□□□□□ -0.64
FOXN3-212ENST00000556541 ACBD3Q9H3P7 528 aa11.07□□□□□ -0.64
FOXN3-212ENST00000556541 CARS2Q9HA77 564 aaKnown RBP11.07□□□□□ -0.64
FOXN3-212ENST00000556541 SYTL2Q9HCH5 934 aa11.07□□□□□ -0.64
FOXN3-212ENST00000556541 CYP4F12Q9HCS2 524 aa11.07□□□□□ -0.64
FOXN3-212ENST00000556541 SPASTQ9UBP0 616 aa11.07□□□□□ -0.64
FOXN3-212ENST00000556541 GULP1Q9UBP9 304 aa11.07□□□□□ -0.64
FOXN3-212ENST00000556541 GMEB2Q9UKD1 530 aa11.07□□□□□ -0.64
FOXN3-212ENST00000556541 PCDHGB2Q9Y5G2 931 aa11.07□□□□□ -0.64
FOXN3-212ENST00000556541 ACTL7BQ9Y614 415 aa11.07□□□□□ -0.64
FOXN3-212ENST00000556541 ARHGEF17Q96PE2 2063 aaPredicted RBP11.07□□□□□ -0.64
FOXN3-212ENST00000556541 SDK1Q7Z5N4 2213 aa11.07□□□□□ -0.64
FOXN3-212ENST00000556541 OTOGLQ3ZCN5 2332 aa11.06□□□□□ -0.64
FOXN3-212ENST00000556541 KNL1Q8NG31 2342 aa11.06□□□□□ -0.64
FOXN3-212ENST00000556541 TDRD6O60522 2096 aaKnown RBP11.06□□□□□ -0.64
FOXN3-212ENST00000556541 A0A087X1B8 175 aa11.06□□□□□ -0.64
FOXN3-212ENST00000556541 A0A1B0GTQ1 180 aa11.06□□□□□ -0.64
FOXN3-212ENST00000556541 A0A1B0GVT2 93 aa11.06□□□□□ -0.64
FOXN3-212ENST00000556541 OR2AG2A6NM03 316 aa11.06□□□□□ -0.64
FOXN3-212ENST00000556541 OR5K4A6NMS3 321 aa11.06□□□□□ -0.64
FOXN3-212ENST00000556541 ARHGAP33O14559 1287 aa11.06□□□□□ -0.64
FOXN3-212ENST00000556541 TPP1O14773 563 aa11.06□□□□□ -0.64
FOXN3-212ENST00000556541 KHNYNO15037 678 aaKnown RBP11.06□□□□□ -0.64
FOXN3-212ENST00000556541 PCDHGA12O60330 932 aa11.06□□□□□ -0.64
FOXN3-212ENST00000556541 NIPSNAP2O75323 286 aa11.06□□□□□ -0.64
FOXN3-212ENST00000556541 POP7O75817 140 aaKnown RBP11.06□□□□□ -0.64
FOXN3-212ENST00000556541 LMNAP02545 664 aaKnown RBP11.06□□□□□ -0.64
FOXN3-212ENST00000556541 MPOP05164 745 aa11.06□□□□□ -0.64
FOXN3-212ENST00000556541 MPC1LP0DKB6 136 aa11.06□□□□□ -0.64
FOXN3-212ENST00000556541 SLC2A4P14672 509 aa11.06□□□□□ -0.64
FOXN3-212ENST00000556541 STMN1P16949 149 aa11.06□□□□□ -0.64
FOXN3-212ENST00000556541 ZNF37AP17032 561 aaPredicted RBP11.06□□□□□ -0.64
FOXN3-212ENST00000556541 JUNDP17535 347 aa11.06□□□□□ -0.64
FOXN3-212ENST00000556541 CCR7P32248 378 aa11.06□□□□□ -0.64
FOXN3-212ENST00000556541 SLC12A2P55011 1212 aa11.06□□□□□ -0.64
FOXN3-212ENST00000556541 TAS2R39P59534 338 aa11.06□□□□□ -0.64
FOXN3-212ENST00000556541 ILF3Q12906 894 aaKnown RBP eCLIP11.06□□□□□ -0.64
FOXN3-212ENST00000556541 GRIK2Q13002 908 aa11.06□□□□□ -0.64
FOXN3-212ENST00000556541 USP10Q14694 798 aaKnown RBP11.06□□□□□ -0.64
FOXN3-212ENST00000556541 KIF19Q2TAC6 998 aa11.06□□□□□ -0.64
FOXN3-212ENST00000556541 TRIM61Q5EBN2 209 aa11.06□□□□□ -0.64
FOXN3-212ENST00000556541 ZNF648Q5T619 568 aaPredicted RBP11.06□□□□□ -0.64
FOXN3-212ENST00000556541 DOK6Q6PKX4 331 aa11.06□□□□□ -0.64
FOXN3-212ENST00000556541 ABRAXAS1Q6UWZ7 409 aa11.06□□□□□ -0.64
FOXN3-212ENST00000556541 XKR5Q6UX68 686 aa11.06□□□□□ -0.64
FOXN3-212ENST00000556541 KDM7AQ6ZMT4 941 aa11.06□□□□□ -0.64
FOXN3-212ENST00000556541 MICALCLQ6ZW33 695 aa11.06□□□□□ -0.64
FOXN3-212ENST00000556541 OTOAQ7RTW8 1153 aa11.06□□□□□ -0.64
FOXN3-212ENST00000556541 SLC22A15Q8IZD6 547 aa11.06□□□□□ -0.64
FOXN3-212ENST00000556541 NKAPQ8N5F7 415 aaKnown RBP11.06□□□□□ -0.64
FOXN3-212ENST00000556541 ZBTB2Q8N680 514 aa11.06□□□□□ -0.64
FOXN3-212ENST00000556541 GPATCH11Q8N954 259 aa11.06□□□□□ -0.64
FOXN3-212ENST00000556541 AVL9Q8NBF6 648 aa11.06□□□□□ -0.64
FOXN3-212ENST00000556541 EPS8L3Q8TE67 593 aaKnown RBP11.06□□□□□ -0.64
FOXN3-212ENST00000556541 ATOH1Q92858 354 aaPredicted RBP11.06□□□□□ -0.64
FOXN3-212ENST00000556541 ELMO2Q96JJ3 720 aa11.06□□□□□ -0.64
FOXN3-212ENST00000556541 UBXN10Q96LJ8 280 aa11.06□□□□□ -0.64
FOXN3-212ENST00000556541 RUFY1Q96T51 708 aa11.06□□□□□ -0.64
FOXN3-212ENST00000556541 OLFM1Q99784 485 aa11.06□□□□□ -0.64
FOXN3-212ENST00000556541 SH3GL2Q99962 352 aa11.06□□□□□ -0.64
FOXN3-212ENST00000556541 COG4Q9H9E3 785 aa11.06□□□□□ -0.64
FOXN3-212ENST00000556541 MKS1Q9NXB0 559 aa11.06□□□□□ -0.64
FOXN3-212ENST00000556541 APOBEC3BQ9UH17 382 aaKnown RBP11.06□□□□□ -0.64
FOXN3-212ENST00000556541 ZNHIT2Q9UHR6 403 aa11.06□□□□□ -0.64
FOXN3-212ENST00000556541 TRMT6Q9UJA5 497 aaKnown RBP11.06□□□□□ -0.64
FOXN3-212ENST00000556541 PNMA8BQ9ULN7 279 aaPredicted RBP11.06□□□□□ -0.64
FOXN3-212ENST00000556541 CDYLQ9Y232 598 aa11.06□□□□□ -0.64
FOXN3-212ENST00000556541 MTO1Q9Y2Z2 717 aaKnown RBP11.06□□□□□ -0.64
FOXN3-212ENST00000556541 COL5A1P20908 1838 aaPredicted RBP11.06□□□□□ -0.64
FOXN3-212ENST00000556541 ATXN2Q99700 1313 aaKnown RBP11.06□□□□□ -0.64
FOXN3-212ENST00000556541 ADAMTS9Q9P2N4 1935 aa11.05□□□□□ -0.64
FOXN3-212ENST00000556541 CABIN1Q9Y6J0 2220 aa11.05□□□□□ -0.64
FOXN3-212ENST00000556541 A6NCN8 305 aa11.05□□□□□ -0.64
FOXN3-212ENST00000556541 TRIM49D1C9J1S8 452 aa11.05□□□□□ -0.64
FOXN3-212ENST00000556541 LMO7DNF2Z398 122 aa11.05□□□□□ -0.64
FOXN3-212ENST00000556541 PIAS1O75925 651 aa11.05□□□□□ -0.64
FOXN3-212ENST00000556541 PIAS2O75928 621 aa11.05□□□□□ -0.64
FOXN3-212ENST00000556541 ALDOAP04075 364 aaKnown RBP11.05□□□□□ -0.64
FOXN3-212ENST00000556541 GSTA1P08263 222 aa11.05□□□□□ -0.64
FOXN3-212ENST00000556541 CHRM3P20309 590 aa11.05□□□□□ -0.64
FOXN3-212ENST00000556541 DGKAP23743 735 aa11.05□□□□□ -0.64
FOXN3-212ENST00000556541 CCNFP41002 786 aa11.05□□□□□ -0.64
FOXN3-212ENST00000556541 GNPDA1P46926 289 aa11.05□□□□□ -0.64
FOXN3-212ENST00000556541 RGS4P49798 205 aa11.05□□□□□ -0.64
FOXN3-212ENST00000556541 CDKN2DP55273 166 aa11.05□□□□□ -0.64
FOXN3-212ENST00000556541 PDAP1Q13442 181 aaKnown RBP11.05□□□□□ -0.64
FOXN3-212ENST00000556541 INSCQ1MX18 579 aa11.05□□□□□ -0.64
FOXN3-212ENST00000556541 KRT71Q3SY84 523 aa11.05□□□□□ -0.64
FOXN3-212ENST00000556541 SH2D5Q6ZV89 423 aa11.05□□□□□ -0.64
FOXN3-212ENST00000556541 DET1Q7L5Y6 550 aa11.05□□□□□ -0.64
FOXN3-212ENST00000556541 KANSL1Q7Z3B3 1105 aa11.05□□□□□ -0.64
FOXN3-212ENST00000556541 TRABD2AQ86V40 505 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms