RNA–Protein interactions for RNA: ENST00000556536.5

TUBB3-211, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 925 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-211ENST00000556536 LMX1AQ8TE12 382 aa17.11■□□□□ 0.33
TUBB3-211ENST00000556536 VPS39Q96JC1 886 aa17.11■□□□□ 0.33
TUBB3-211ENST00000556536 ELMO2Q96JJ3 720 aa17.11■□□□□ 0.33
TUBB3-211ENST00000556536 TIMM29Q9BSF4 260 aa17.11■□□□□ 0.33
TUBB3-211ENST00000556536 CCDC68Q9H2F9 335 aa17.11■□□□□ 0.33
TUBB3-211ENST00000556536 KLC4Q9NSK0 619 aa17.11■□□□□ 0.33
TUBB3-211ENST00000556536 SEMA4GQ9NTN9 838 aa17.11■□□□□ 0.33
TUBB3-211ENST00000556536 UCKL1Q9NWZ5 548 aa17.11■□□□□ 0.33
TUBB3-211ENST00000556536 KCNK6Q9Y257 313 aa17.11■□□□□ 0.33
TUBB3-211ENST00000556536 DNAJC16Q9Y2G8 782 aa17.11■□□□□ 0.33
TUBB3-211ENST00000556536 DNMT3AQ9Y6K1 912 aaPredicted RBP17.11■□□□□ 0.33
TUBB3-211ENST00000556536 LAMA1P25391 3075 aa17.11■□□□□ 0.33
TUBB3-211ENST00000556536 FAM95CA0A1B0GW59 222 aa17.1■□□□□ 0.33
TUBB3-211ENST00000556536 HMX2A2RU54 273 aa17.1■□□□□ 0.33
TUBB3-211ENST00000556536 MGAT4DA6NG13 374 aa17.1■□□□□ 0.33
TUBB3-211ENST00000556536 PRR19A6NJB7 356 aa17.1■□□□□ 0.33
TUBB3-211ENST00000556536 H3BM21 787 aa17.1■□□□□ 0.33
TUBB3-211ENST00000556536 H3BMM5 538 aa17.1■□□□□ 0.33
TUBB3-211ENST00000556536 PIAS2O75928 621 aa17.1■□□□□ 0.33
TUBB3-211ENST00000556536 FTH1P02794 183 aa17.1■□□□□ 0.33
TUBB3-211ENST00000556536 INHBAP08476 426 aa17.1■□□□□ 0.33
TUBB3-211ENST00000556536 CTSEP14091 401 aa17.1■□□□□ 0.33
TUBB3-211ENST00000556536 CHRM3P20309 590 aa17.1■□□□□ 0.33
TUBB3-211ENST00000556536 SPRP35270 261 aaPredicted RBP17.1■□□□□ 0.33
TUBB3-211ENST00000556536 ARRB1P49407 418 aaPredicted RBP17.1■□□□□ 0.33
TUBB3-211ENST00000556536 BMPR2Q13873 1038 aa17.1■□□□□ 0.33
TUBB3-211ENST00000556536 NFE2L1Q14494 772 aa17.1■□□□□ 0.33
TUBB3-211ENST00000556536 PIM3Q86V86 326 aa17.1■□□□□ 0.33
TUBB3-211ENST00000556536 AMZ2Q86W34 360 aa17.1■□□□□ 0.33
TUBB3-211ENST00000556536 MINDY1Q8N5J2 469 aa17.1■□□□□ 0.33
TUBB3-211ENST00000556536 ZNF548Q8NEK5 533 aaPredicted RBP17.1■□□□□ 0.33
TUBB3-211ENST00000556536 OR2L2Q8NH16 312 aa17.1■□□□□ 0.33
TUBB3-211ENST00000556536 GPBAR1Q8TDU6 330 aa17.1■□□□□ 0.33
TUBB3-211ENST00000556536 SLC30A3Q99726 388 aa17.1■□□□□ 0.33
TUBB3-211ENST00000556536 OLFM1Q99784 485 aa17.1■□□□□ 0.33
TUBB3-211ENST00000556536 CCDC77Q9BR77 488 aa17.1■□□□□ 0.33
TUBB3-211ENST00000556536 SARS2Q9NP81 518 aaKnown RBP17.1■□□□□ 0.33
TUBB3-211ENST00000556536 RXFP3Q9NSD7 469 aa17.1■□□□□ 0.33
TUBB3-211ENST00000556536 SPASTQ9UBP0 616 aa17.1■□□□□ 0.33
TUBB3-211ENST00000556536 CORO1CQ9ULV4 474 aaPredicted RBP17.1■□□□□ 0.33
TUBB3-211ENST00000556536 PLAAQ9Y263 795 aa17.1■□□□□ 0.33
TUBB3-211ENST00000556536 NFS1Q9Y697 457 aa17.1■□□□□ 0.33
TUBB3-211ENST00000556536 COMMD10Q9Y6G5 202 aa17.1■□□□□ 0.33
TUBB3-211ENST00000556536 PCDH15Q96QU1 1955 aa17.09■□□□□ 0.33
TUBB3-211ENST00000556536 LRP3O75074 770 aa17.09■□□□□ 0.33
TUBB3-211ENST00000556536 CER1O95813 267 aa17.09■□□□□ 0.33
TUBB3-211ENST00000556536 ITGA2BP08514 1039 aa17.09■□□□□ 0.33
TUBB3-211ENST00000556536 SAT1P21673 171 aa17.09■□□□□ 0.33
TUBB3-211ENST00000556536 DGKAP23743 735 aa17.09■□□□□ 0.33
TUBB3-211ENST00000556536 AOAHP28039 575 aa17.09■□□□□ 0.33
TUBB3-211ENST00000556536 EPHA8P29322 1005 aaPredicted RBP17.09■□□□□ 0.33
TUBB3-211ENST00000556536 CLCN7P51798 805 aa17.09■□□□□ 0.33
TUBB3-211ENST00000556536 LRP8Q14114 963 aa17.09■□□□□ 0.33
TUBB3-211ENST00000556536 CSRP2Q16527 193 aa17.09■□□□□ 0.33
TUBB3-211ENST00000556536 FAM45BPQ6NSW5 357 aa17.09■□□□□ 0.33
TUBB3-211ENST00000556536 SLC30A9Q6PML9 568 aa17.09■□□□□ 0.33
TUBB3-211ENST00000556536 CFAP206Q8IYR0 622 aa17.09■□□□□ 0.33
TUBB3-211ENST00000556536 SLC25A45Q8N413 288 aa17.09■□□□□ 0.33
TUBB3-211ENST00000556536 SIDT2Q8NBJ9 832 aaKnown RBP17.09■□□□□ 0.33
TUBB3-211ENST00000556536 GIMAP7Q8NHV1 300 aa17.09■□□□□ 0.33
TUBB3-211ENST00000556536 FAM45AQ8TCE6 357 aa17.09■□□□□ 0.33
TUBB3-211ENST00000556536 EPS8L3Q8TE67 593 aaKnown RBP17.09■□□□□ 0.33
TUBB3-211ENST00000556536 ELMO1Q92556 727 aa17.09■□□□□ 0.33
TUBB3-211ENST00000556536 KCNJ9Q92806 393 aa17.09■□□□□ 0.33
TUBB3-211ENST00000556536 PANX3Q96QZ0 392 aa17.09■□□□□ 0.33
TUBB3-211ENST00000556536 GPR21Q99679 349 aa17.09■□□□□ 0.33
TUBB3-211ENST00000556536 GPR22Q99680 433 aa17.09■□□□□ 0.33
TUBB3-211ENST00000556536 CAB39LQ9H9S4 337 aa17.09■□□□□ 0.33
TUBB3-211ENST00000556536 ARGLU1Q9NWB6 273 aaPredicted RBP17.09■□□□□ 0.33
TUBB3-211ENST00000556536 CTNNAL1Q9UBT7 734 aa17.09■□□□□ 0.33
TUBB3-211ENST00000556536 FETUBQ9UGM5 382 aa17.09■□□□□ 0.33
TUBB3-211ENST00000556536 SLC24A2Q9UI40 661 aa17.09■□□□□ 0.33
TUBB3-211ENST00000556536 ZNF180Q9UJW8 692 aa17.09■□□□□ 0.33
TUBB3-211ENST00000556536 SLC39A10Q9ULF5 831 aa17.09■□□□□ 0.33
TUBB3-211ENST00000556536 VWA7Q9Y334 891 aa17.09■□□□□ 0.33
TUBB3-211ENST00000556536 IKBKGQ9Y6K9 419 aa17.09■□□□□ 0.33
TUBB3-211ENST00000556536 C17orf113A0A1B0GUU1 675 aa17.08■□□□□ 0.32
TUBB3-211ENST00000556536 SMIM23A6NLE4 172 aa17.08■□□□□ 0.32
TUBB3-211ENST00000556536 E5RI56 91 aa17.08■□□□□ 0.32
TUBB3-211ENST00000556536 F8W8V4 182 aa17.08■□□□□ 0.32
TUBB3-211ENST00000556536 AQP9O43315 295 aa17.08■□□□□ 0.32
TUBB3-211ENST00000556536 DFNA5O60443 496 aa17.08■□□□□ 0.32
TUBB3-211ENST00000556536 TCEA3O75764 348 aa17.08■□□□□ 0.32
TUBB3-211ENST00000556536 FDXRP22570 491 aa17.08■□□□□ 0.32
TUBB3-211ENST00000556536 ACTR1BP42025 376 aa17.08■□□□□ 0.32
TUBB3-211ENST00000556536 SLCO1A2P46721 670 aa17.08■□□□□ 0.32
TUBB3-211ENST00000556536 PREPP48147 710 aa17.08■□□□□ 0.32
TUBB3-211ENST00000556536 TAS2R39P59534 338 aa17.08■□□□□ 0.32
TUBB3-211ENST00000556536 ACTR1AP61163 376 aa17.08■□□□□ 0.32
TUBB3-211ENST00000556536 DMPKQ09013 629 aa17.08■□□□□ 0.32
TUBB3-211ENST00000556536 ILF3Q12906 894 aaKnown RBP eCLIP17.08■□□□□ 0.32
TUBB3-211ENST00000556536 BOP1Q14137 746 aaKnown RBP17.08■□□□□ 0.32
TUBB3-211ENST00000556536 MROH9Q5TGP6 573 aa17.08■□□□□ 0.32
TUBB3-211ENST00000556536 ADGRD1Q6QNK2 874 aa17.08■□□□□ 0.32
TUBB3-211ENST00000556536 KANSL1Q7Z3B3 1105 aa17.08■□□□□ 0.32
TUBB3-211ENST00000556536 TAF8Q7Z7C8 310 aa17.08■□□□□ 0.32
TUBB3-211ENST00000556536 GATAD2AQ86YP4 633 aa17.08■□□□□ 0.32
TUBB3-211ENST00000556536 CEP97Q8IW35 865 aa17.08■□□□□ 0.32
TUBB3-211ENST00000556536 IQCKQ8N0W5 287 aa17.08■□□□□ 0.32
TUBB3-211ENST00000556536 FSTL5Q8N475 847 aaPredicted RBP17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms