RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 SLC30A9Q6PML9 568 aa5.17□□□□□ -1.58
SRP54-211ENST00000556445 PET117Q6UWS5 81 aa5.17□□□□□ -1.58
SRP54-211ENST00000556445 C17orf99Q6UX52 265 aa5.17□□□□□ -1.58
SRP54-211ENST00000556445 FAM83HQ6ZRV2 1179 aaPredicted RBP5.17□□□□□ -1.58
SRP54-211ENST00000556445 NT5DC3Q86UY8 548 aa5.17□□□□□ -1.58
SRP54-211ENST00000556445 PDSS2Q86YH6 399 aa5.17□□□□□ -1.58
SRP54-211ENST00000556445 IFT20Q8IY31 132 aa5.17□□□□□ -1.58
SRP54-211ENST00000556445 RASGEF1CQ8N431 466 aa5.17□□□□□ -1.58
SRP54-211ENST00000556445 DPP10Q8N608 796 aa5.17□□□□□ -1.58
SRP54-211ENST00000556445 POMGNT2Q8NAT1 580 aa5.17□□□□□ -1.58
SRP54-211ENST00000556445 FIBINQ8TAL6 211 aa5.17□□□□□ -1.58
SRP54-211ENST00000556445 ZNF564Q8TBZ8 553 aaPredicted RBP5.17□□□□□ -1.58
SRP54-211ENST00000556445 NTN5Q8WTR8 489 aaPredicted RBP5.17□□□□□ -1.58
SRP54-211ENST00000556445 ARHGEF2Q92974 986 aaKnown RBP5.17□□□□□ -1.58
SRP54-211ENST00000556445 C3orf49Q96BT1 292 aa5.17□□□□□ -1.58
SRP54-211ENST00000556445 RMDN1Q96DB5 314 aa5.17□□□□□ -1.58
SRP54-211ENST00000556445 HES6Q96HZ4 224 aa5.17□□□□□ -1.58
SRP54-211ENST00000556445 RHOXF2Q9BQY4 288 aa5.17□□□□□ -1.58
SRP54-211ENST00000556445 APOL6Q9BWW8 343 aa5.17□□□□□ -1.58
SRP54-211ENST00000556445 PHF7Q9BWX1 381 aaPredicted RBP5.17□□□□□ -1.58
SRP54-211ENST00000556445 THAP2Q9H0W7 228 aa5.17□□□□□ -1.58
SRP54-211ENST00000556445 CDT1Q9H211 546 aa5.17□□□□□ -1.58
SRP54-211ENST00000556445 ANKZF1Q9H8Y5 726 aa5.17□□□□□ -1.58
SRP54-211ENST00000556445 VIPAS39Q9H9C1 493 aa5.17□□□□□ -1.58
SRP54-211ENST00000556445 CYP3A43Q9HB55 503 aa5.17□□□□□ -1.58
SRP54-211ENST00000556445 NRIP3Q9NQ35 241 aa5.17□□□□□ -1.58
SRP54-211ENST00000556445 HEYLQ9NQ87 328 aaPredicted RBP5.17□□□□□ -1.58
SRP54-211ENST00000556445 MRPL15Q9P015 296 aaKnown RBP5.17□□□□□ -1.58
SRP54-211ENST00000556445 PCSK1NQ9UHG2 260 aa5.17□□□□□ -1.58
SRP54-211ENST00000556445 ITGA11Q9UKX5 1188 aa5.17□□□□□ -1.58
SRP54-211ENST00000556445 HPCAL4Q9UM19 191 aa5.17□□□□□ -1.58
SRP54-211ENST00000556445 TFR2Q9UP52 801 aa5.17□□□□□ -1.58
SRP54-211ENST00000556445 NEU2Q9Y3R4 380 aa5.17□□□□□ -1.58
SRP54-211ENST00000556445 C2CD2Q9Y426 696 aa5.17□□□□□ -1.58
SRP54-211ENST00000556445 A0A0B4J203 849 aa5.16□□□□□ -1.58
SRP54-211ENST00000556445 CCDC195A0A1B0GUA6 201 aa5.16□□□□□ -1.58
SRP54-211ENST00000556445 A0A1B0GUA9 196 aa5.16□□□□□ -1.58
SRP54-211ENST00000556445 MBLAC1A4D2B0 266 aaPredicted RBP5.16□□□□□ -1.58
SRP54-211ENST00000556445 FAM90A18PA6NE21 464 aa5.16□□□□□ -1.58
SRP54-211ENST00000556445 FAM90A16PA6NEW6 464 aa5.16□□□□□ -1.58
SRP54-211ENST00000556445 FAM90A9PA6NNJ1 464 aa5.16□□□□□ -1.58
SRP54-211ENST00000556445 A8MVJ9 347 aa5.16□□□□□ -1.58
SRP54-211ENST00000556445 FAM90A5PA8MXJ8 464 aa5.16□□□□□ -1.58
SRP54-211ENST00000556445 M0QZ92 97 aa5.16□□□□□ -1.58
SRP54-211ENST00000556445 TNPO2O14787 897 aaKnown RBP5.16□□□□□ -1.58
SRP54-211ENST00000556445 PROM1O43490 865 aa5.16□□□□□ -1.58
SRP54-211ENST00000556445 CA12O43570 354 aa5.16□□□□□ -1.58
SRP54-211ENST00000556445 SPOPO43791 374 aa5.16□□□□□ -1.58
SRP54-211ENST00000556445 CEP104O60308 925 aa5.16□□□□□ -1.58
SRP54-211ENST00000556445 FAM189A1O60320 539 aa5.16□□□□□ -1.58
SRP54-211ENST00000556445 SMPD2O60906 423 aa5.16□□□□□ -1.58
SRP54-211ENST00000556445 PNPP00491 289 aa5.16□□□□□ -1.58
SRP54-211ENST00000556445 FAM90A15PP0C7V4 464 aa5.16□□□□□ -1.58
SRP54-211ENST00000556445 FAM90A14PP0C7W9 464 aa5.16□□□□□ -1.58
SRP54-211ENST00000556445 ZNF286BP0CG31 522 aa5.16□□□□□ -1.58
SRP54-211ENST00000556445 STAG3L1P0CL83 205 aa5.16□□□□□ -1.58
SRP54-211ENST00000556445 PNMA6AP0CW24 399 aaPredicted RBP5.16□□□□□ -1.58
SRP54-211ENST00000556445 CYP2C9P11712 490 aa5.16□□□□□ -1.58
SRP54-211ENST00000556445 UNGP13051 313 aaPredicted RBP5.16□□□□□ -1.58
SRP54-211ENST00000556445 ALADP13716 330 aa5.16□□□□□ -1.58
SRP54-211ENST00000556445 AKR1A1P14550 325 aa5.16□□□□□ -1.58
SRP54-211ENST00000556445 CHRNB2P17787 502 aa5.16□□□□□ -1.58
SRP54-211ENST00000556445 IL10P22301 178 aa5.16□□□□□ -1.58
SRP54-211ENST00000556445 GATA3P23771 443 aa5.16□□□□□ -1.58
SRP54-211ENST00000556445 CTNNA2P26232 953 aa5.16□□□□□ -1.58
SRP54-211ENST00000556445 PTH2RP49190 550 aa5.16□□□□□ -1.58
SRP54-211ENST00000556445 RPS7P62081 194 aaKnown RBP5.16□□□□□ -1.58
SRP54-211ENST00000556445 MRPS5P82675 430 aaKnown RBP5.16□□□□□ -1.58
SRP54-211ENST00000556445 TFAMQ00059 246 aaKnown RBP5.16□□□□□ -1.58
SRP54-211ENST00000556445 ZBTB16Q05516 673 aa5.16□□□□□ -1.58
SRP54-211ENST00000556445 MYO1EQ12965 1108 aa5.16□□□□□ -1.58
SRP54-211ENST00000556445 CBX3Q13185 183 aa5.16□□□□□ -1.58
SRP54-211ENST00000556445 DRP2Q13474 957 aa5.16□□□□□ -1.58
SRP54-211ENST00000556445 DYRK1AQ13627 763 aa5.16□□□□□ -1.58
SRP54-211ENST00000556445 CAMK1Q14012 370 aa5.16□□□□□ -1.58
SRP54-211ENST00000556445 IRF3Q14653 427 aa5.16□□□□□ -1.58
SRP54-211ENST00000556445 SMU1Q2TAY7 513 aa5.16□□□□□ -1.58
SRP54-211ENST00000556445 CD300EQ496F6 205 aaPredicted RBP5.16□□□□□ -1.58
SRP54-211ENST00000556445 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.16□□□□□ -1.58
SRP54-211ENST00000556445 BEND6Q5SZJ8 279 aaPredicted RBP5.16□□□□□ -1.58
SRP54-211ENST00000556445 MPP7Q5T2T1 576 aa5.16□□□□□ -1.58
SRP54-211ENST00000556445 TAF3Q5VWG9 929 aa5.16□□□□□ -1.58
SRP54-211ENST00000556445 KIAA0895LQ68EN5 471 aa5.16□□□□□ -1.58
SRP54-211ENST00000556445 NOTUMQ6P988 496 aa5.16□□□□□ -1.58
SRP54-211ENST00000556445 VWA1Q6PCB0 445 aa5.16□□□□□ -1.58
SRP54-211ENST00000556445 SLC27A1Q6PCB7 646 aa5.16□□□□□ -1.58
SRP54-211ENST00000556445 EMBQ6PCB8 327 aa5.16□□□□□ -1.58
SRP54-211ENST00000556445 TMEM270Q6UE05 265 aa5.16□□□□□ -1.58
SRP54-211ENST00000556445 FIP1L1Q6UN15 594 aaKnown RBP5.16□□□□□ -1.58
SRP54-211ENST00000556445 CCNI2Q6ZMN8 369 aaPredicted RBP5.16□□□□□ -1.58
SRP54-211ENST00000556445 SYT13Q7L8C5 426 aa5.16□□□□□ -1.58
SRP54-211ENST00000556445 TLK2Q86UE8 772 aa5.16□□□□□ -1.58
SRP54-211ENST00000556445 SLC47A2Q86VL8 602 aa5.16□□□□□ -1.58
SRP54-211ENST00000556445 PHF13Q86YI8 300 aaPredicted RBP5.16□□□□□ -1.58
SRP54-211ENST00000556445 CCDC28AQ8IWP9 274 aa5.16□□□□□ -1.58
SRP54-211ENST00000556445 IQCF2Q8IXL9 164 aa5.16□□□□□ -1.58
SRP54-211ENST00000556445 EFCAB13Q8IY85 973 aa5.16□□□□□ -1.58
SRP54-211ENST00000556445 CCDC105Q8IYK2 499 aa5.16□□□□□ -1.58
SRP54-211ENST00000556445 ADGRG5Q8IZF4 528 aa5.16□□□□□ -1.58
SRP54-211ENST00000556445 MCOLN2Q8IZK6 566 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms