RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 PFKPQ01813 784 aa14.84□□□□□ -0.03
ARHGEF40-207ENST00000556399 PLD1Q13393 1074 aa14.84□□□□□ -0.03
ARHGEF40-207ENST00000556399 TGFBIQ15582 683 aa14.84□□□□□ -0.03
ARHGEF40-207ENST00000556399 TAZQ16635 292 aa14.84□□□□□ -0.03
ARHGEF40-207ENST00000556399 TIGD5Q53EQ6 642 aa14.84□□□□□ -0.03
ARHGEF40-207ENST00000556399 LYPLAL1Q5VWZ2 237 aa14.84□□□□□ -0.03
ARHGEF40-207ENST00000556399 NIPAL1Q6NVV3 410 aa14.84□□□□□ -0.03
ARHGEF40-207ENST00000556399 USP45Q70EL2 814 aa14.84□□□□□ -0.03
ARHGEF40-207ENST00000556399 MUS81Q96NY9 551 aa14.84□□□□□ -0.03
ARHGEF40-207ENST00000556399 TRIM39Q9HCM9 518 aa14.84□□□□□ -0.03
ARHGEF40-207ENST00000556399 VPS4AQ9UN37 437 aa14.84□□□□□ -0.03
ARHGEF40-207ENST00000556399 COL2A1P02458 1487 aaPredicted RBP14.84□□□□□ -0.03
ARHGEF40-207ENST00000556399 TMCC2O75069 709 aa14.84□□□□□ -0.03
ARHGEF40-207ENST00000556399 PRKD3O94806 890 aa14.84□□□□□ -0.03
ARHGEF40-207ENST00000556399 CTSKP43235 329 aa14.84□□□□□ -0.03
ARHGEF40-207ENST00000556399 GSTM5P46439 218 aa14.84□□□□□ -0.03
ARHGEF40-207ENST00000556399 PCSK9Q8NBP7 692 aaKnown RBP14.84□□□□□ -0.03
ARHGEF40-207ENST00000556399 TEPSINQ96N21 525 aa14.84□□□□□ -0.03
ARHGEF40-207ENST00000556399 MRM3Q9HC36 420 aaKnown RBP14.84□□□□□ -0.03
ARHGEF40-207ENST00000556399 ARIH1Q9Y4X5 557 aaPredicted RBP14.84□□□□□ -0.03
ARHGEF40-207ENST00000556399 ARAP2Q8WZ64 1704 aa14.84□□□□□ -0.03
ARHGEF40-207ENST00000556399 A0A0G2JLL6 359 aaPredicted RBP14.84□□□□□ -0.03
ARHGEF40-207ENST00000556399 TBX1O43435 398 aa14.84□□□□□ -0.03
ARHGEF40-207ENST00000556399 TBL1XO60907 577 aa14.84□□□□□ -0.03
ARHGEF40-207ENST00000556399 PRKCGP05129 697 aa14.84□□□□□ -0.03
ARHGEF40-207ENST00000556399 PABPC1P11940 636 aaKnown RBP14.84□□□□□ -0.03
ARHGEF40-207ENST00000556399 ITGA1P56199 1179 aa14.84□□□□□ -0.03
ARHGEF40-207ENST00000556399 ZNF33AQ06730 810 aa14.84□□□□□ -0.03
ARHGEF40-207ENST00000556399 MEP1AQ16819 746 aa14.84□□□□□ -0.03
ARHGEF40-207ENST00000556399 ERICH5Q6P6B1 374 aa14.84□□□□□ -0.03
ARHGEF40-207ENST00000556399 PRRT2Q7Z6L0 340 aaPredicted RBP14.84□□□□□ -0.03
ARHGEF40-207ENST00000556399 CYP4Z2PQ8N1L4 340 aa14.84□□□□□ -0.03
ARHGEF40-207ENST00000556399 CHCHD6Q9BRQ6 235 aa14.84□□□□□ -0.03
ARHGEF40-207ENST00000556399 DNAJC5Q9H3Z4 198 aa14.84□□□□□ -0.03
ARHGEF40-207ENST00000556399 CDC14AQ9UNH5 594 aa14.84□□□□□ -0.03
ARHGEF40-207ENST00000556399 PCDHGA7Q9Y5G6 932 aa14.84□□□□□ -0.03
ARHGEF40-207ENST00000556399 FPGTO14772 594 aa14.84□□□□□ -0.03
ARHGEF40-207ENST00000556399 CLDN9O95484 217 aa14.84□□□□□ -0.03
ARHGEF40-207ENST00000556399 CATP04040 527 aaKnown RBP14.84□□□□□ -0.03
ARHGEF40-207ENST00000556399 CACNG1Q06432 222 aa14.84□□□□□ -0.03
ARHGEF40-207ENST00000556399 LAPTM5Q13571 262 aa14.84□□□□□ -0.03
ARHGEF40-207ENST00000556399 NPTX1Q15818 432 aa14.84□□□□□ -0.03
ARHGEF40-207ENST00000556399 UBE2R2Q712K3 238 aaPredicted RBP14.84□□□□□ -0.03
ARHGEF40-207ENST00000556399 R3HCC1LQ7Z5L2 792 aaKnown RBP14.84□□□□□ -0.03
ARHGEF40-207ENST00000556399 GLB1L3Q8NCI6 653 aaPredicted RBP14.84□□□□□ -0.03
ARHGEF40-207ENST00000556399 RAET1EQ8TD07 263 aa14.84□□□□□ -0.03
ARHGEF40-207ENST00000556399 AHSPQ9NZD4 102 aa14.84□□□□□ -0.03
ARHGEF40-207ENST00000556399 KCNH4Q9UQ05 1017 aa14.84□□□□□ -0.03
ARHGEF40-207ENST00000556399 WDR37Q9Y2I8 494 aa14.84□□□□□ -0.03
ARHGEF40-207ENST00000556399 COL22A1Q8NFW1 1626 aaPredicted RBP14.84□□□□□ -0.03
ARHGEF40-207ENST00000556399 CDC7O00311 574 aa14.83□□□□□ -0.03
ARHGEF40-207ENST00000556399 TP73O15350 636 aa14.83□□□□□ -0.03
ARHGEF40-207ENST00000556399 INSIG1O15503 277 aa14.83□□□□□ -0.03
ARHGEF40-207ENST00000556399 NIPSNAP2O75323 286 aa14.83□□□□□ -0.03
ARHGEF40-207ENST00000556399 RASAL1O95294 804 aa14.83□□□□□ -0.03
ARHGEF40-207ENST00000556399 LRG1P02750 347 aa14.83□□□□□ -0.03
ARHGEF40-207ENST00000556399 EPHB3P54753 998 aa14.83□□□□□ -0.03
ARHGEF40-207ENST00000556399 ARSFP54793 590 aa14.83□□□□□ -0.03
ARHGEF40-207ENST00000556399 RPS7P62081 194 aaKnown RBP14.83□□□□□ -0.03
ARHGEF40-207ENST00000556399 PGM2L1Q6PCE3 622 aa14.83□□□□□ -0.03
ARHGEF40-207ENST00000556399 PTCHD4Q6ZW05 846 aa14.83□□□□□ -0.03
ARHGEF40-207ENST00000556399 SLC15A3Q8IY34 581 aa14.83□□□□□ -0.03
ARHGEF40-207ENST00000556399 KDM1BQ8NB78 822 aa14.83□□□□□ -0.03
ARHGEF40-207ENST00000556399 STON2Q8WXE9 905 aa14.83□□□□□ -0.03
ARHGEF40-207ENST00000556399 TOR3AQ9H497 397 aa14.83□□□□□ -0.03
ARHGEF40-207ENST00000556399 MAPRE3Q9UPY8 281 aa14.83□□□□□ -0.03
ARHGEF40-207ENST00000556399 H0Y858 1186 aa14.83□□□□□ -0.04
ARHGEF40-207ENST00000556399 HOXA2O43364 376 aa14.83□□□□□ -0.04
ARHGEF40-207ENST00000556399 PGLSO95336 258 aa14.83□□□□□ -0.04
ARHGEF40-207ENST00000556399 CYP11A1P05108 521 aa14.83□□□□□ -0.04
ARHGEF40-207ENST00000556399 UGT2B4P06133 528 aa14.83□□□□□ -0.04
ARHGEF40-207ENST00000556399 FCGRTP55899 365 aa14.83□□□□□ -0.04
ARHGEF40-207ENST00000556399 TUBA3CQ13748 450 aa14.83□□□□□ -0.04
ARHGEF40-207ENST00000556399 MINDY2Q8NBR6 621 aa14.83□□□□□ -0.04
ARHGEF40-207ENST00000556399 CDKN2AIPNLQ96HQ2 116 aa14.83□□□□□ -0.04
ARHGEF40-207ENST00000556399 Q96MT0 163 aa14.83□□□□□ -0.04
ARHGEF40-207ENST00000556399 ADAMTS10Q9H324 1103 aa14.83□□□□□ -0.04
ARHGEF40-207ENST00000556399 RPF2Q9H7B2 306 aaKnown RBP14.83□□□□□ -0.04
ARHGEF40-207ENST00000556399 ZNF221Q9UK13 617 aa14.83□□□□□ -0.04
ARHGEF40-207ENST00000556399 EFCAB9A8MZ26 197 aa14.83□□□□□ -0.04
ARHGEF40-207ENST00000556399 PSMD11O00231 422 aa14.83□□□□□ -0.04
ARHGEF40-207ENST00000556399 PIRO00625 290 aa14.83□□□□□ -0.04
ARHGEF40-207ENST00000556399 BEST1O76090 585 aa14.83□□□□□ -0.04
ARHGEF40-207ENST00000556399 ESR1P03372 595 aa14.83□□□□□ -0.04
ARHGEF40-207ENST00000556399 MYCLP1P12525 358 aaPredicted RBP14.83□□□□□ -0.04
ARHGEF40-207ENST00000556399 GK3PQ14409 553 aa14.83□□□□□ -0.04
ARHGEF40-207ENST00000556399 GRB7Q14451 532 aa14.83□□□□□ -0.04
ARHGEF40-207ENST00000556399 MYBPC3Q14896 1274 aa14.83□□□□□ -0.04
ARHGEF40-207ENST00000556399 MSANTD2Q6P1R3 559 aa14.83□□□□□ -0.04
ARHGEF40-207ENST00000556399 TRMT11Q7Z4G4 463 aaKnown RBP14.83□□□□□ -0.04
ARHGEF40-207ENST00000556399 ZBTB2Q8N680 514 aa14.83□□□□□ -0.04
ARHGEF40-207ENST00000556399 RNFT2Q96EX2 444 aa14.83□□□□□ -0.04
ARHGEF40-207ENST00000556399 COPS8Q99627 209 aa14.83□□□□□ -0.04
ARHGEF40-207ENST00000556399 SLC29A1Q99808 456 aa14.83□□□□□ -0.04
ARHGEF40-207ENST00000556399 WDR83Q9BRX9 315 aaKnown RBP14.83□□□□□ -0.04
ARHGEF40-207ENST00000556399 CIPCQ9C0C6 399 aa14.83□□□□□ -0.04
ARHGEF40-207ENST00000556399 EXD2Q9NVH0 621 aa14.83□□□□□ -0.04
ARHGEF40-207ENST00000556399 IGKV6-21A0A0C4DH24 114 aa14.83□□□□□ -0.04
ARHGEF40-207ENST00000556399 TCRBV5S1A1TA0A578 114 aa14.83□□□□□ -0.04
ARHGEF40-207ENST00000556399 ENPP3O14638 875 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms