RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 CHRM3P20309 590 aa8.19□□□□□ -1.1
ATXN3-235ENST00000556082 GKP32189 559 aa8.19□□□□□ -1.1
ATXN3-235ENST00000556082 CBSP35520 551 aa8.19□□□□□ -1.1
ATXN3-235ENST00000556082 CPOXP36551 454 aa8.19□□□□□ -1.1
ATXN3-235ENST00000556082 NSG1P42857 185 aa8.19□□□□□ -1.1
ATXN3-235ENST00000556082 CCR10P46092 362 aa8.19□□□□□ -1.1
ATXN3-235ENST00000556082 COPAP53621 1224 aa8.19□□□□□ -1.1
ATXN3-235ENST00000556082 DCDC1P59894 354 aa8.19□□□□□ -1.1
ATXN3-235ENST00000556082 SHHQ15465 462 aa8.19□□□□□ -1.1
ATXN3-235ENST00000556082 CHRNA6Q15825 494 aa8.19□□□□□ -1.1
ATXN3-235ENST00000556082 LSM12Q3MHD2 195 aaKnown RBP8.19□□□□□ -1.1
ATXN3-235ENST00000556082 UGT3A2Q3SY77 523 aa8.19□□□□□ -1.1
ATXN3-235ENST00000556082 ACCSLQ4AC99 568 aa8.19□□□□□ -1.1
ATXN3-235ENST00000556082 CDKL4Q5MAI5 379 aa8.19□□□□□ -1.1
ATXN3-235ENST00000556082 C9orf50Q5SZB4 431 aa8.19□□□□□ -1.1
ATXN3-235ENST00000556082 GPRC6AQ5T6X5 926 aa8.19□□□□□ -1.1
ATXN3-235ENST00000556082 TTC23LQ6PF05 361 aa8.19□□□□□ -1.1
ATXN3-235ENST00000556082 ETFBKMTQ8IXQ9 262 aa8.19□□□□□ -1.1
ATXN3-235ENST00000556082 FBXO39Q8N4B4 442 aa8.19□□□□□ -1.1
ATXN3-235ENST00000556082 IL22RA1Q8N6P7 574 aa8.19□□□□□ -1.1
ATXN3-235ENST00000556082 PTGR2Q8N8N7 351 aaPredicted RBP8.19□□□□□ -1.1
ATXN3-235ENST00000556082 GIMAP7Q8NHV1 300 aa8.19□□□□□ -1.1
ATXN3-235ENST00000556082 RP9Q8TA86 221 aaKnown RBP8.19□□□□□ -1.1
ATXN3-235ENST00000556082 ITFG1Q8TB96 612 aa8.19□□□□□ -1.1
ATXN3-235ENST00000556082 SMARCD2Q92925 531 aa8.19□□□□□ -1.1
ATXN3-235ENST00000556082 PHF21BQ96EK2 531 aa8.19□□□□□ -1.1
ATXN3-235ENST00000556082 ASB16Q96NS5 453 aa8.19□□□□□ -1.1
ATXN3-235ENST00000556082 PSMG3-AS1Q96PY0 264 aa8.19□□□□□ -1.1
ATXN3-235ENST00000556082 UNKQ9C0B0 810 aaKnown RBP8.19□□□□□ -1.1
ATXN3-235ENST00000556082 CYP4F12Q9HCS2 524 aa8.19□□□□□ -1.1
ATXN3-235ENST00000556082 SMOXQ9NWM0 555 aa8.19□□□□□ -1.1
ATXN3-235ENST00000556082 GALPQ9UBC7 116 aa8.19□□□□□ -1.1
ATXN3-235ENST00000556082 RNF112Q9ULX5 631 aa8.19□□□□□ -1.1
ATXN3-235ENST00000556082 PLA2G4CQ9UP65 541 aa8.19□□□□□ -1.1
ATXN3-235ENST00000556082 NOTCH4Q99466 2003 aa8.19□□□□□ -1.1
ATXN3-235ENST00000556082 GRXCR1A8MXD5 290 aa8.18□□□□□ -1.1
ATXN3-235ENST00000556082 E5RI56 91 aa8.18□□□□□ -1.1
ATXN3-235ENST00000556082 J3QW42 95 aa8.18□□□□□ -1.1
ATXN3-235ENST00000556082 UBXN8O00124 270 aa8.18□□□□□ -1.1
ATXN3-235ENST00000556082 CDC7O00311 574 aa8.18□□□□□ -1.1
ATXN3-235ENST00000556082 PRMT3O60678 531 aa8.18□□□□□ -1.1
ATXN3-235ENST00000556082 VPS4BO75351 444 aa8.18□□□□□ -1.1
ATXN3-235ENST00000556082 TM7SF2O76062 418 aa8.18□□□□□ -1.1
ATXN3-235ENST00000556082 CDK14O94921 469 aa8.18□□□□□ -1.1
ATXN3-235ENST00000556082 NFATC1O95644 943 aa8.18□□□□□ -1.1
ATXN3-235ENST00000556082 MLYCDO95822 493 aa8.18□□□□□ -1.1
ATXN3-235ENST00000556082 LMNAP02545 664 aaKnown RBP8.18□□□□□ -1.1
ATXN3-235ENST00000556082 RPS17P08708 135 aaKnown RBP8.18□□□□□ -1.1
ATXN3-235ENST00000556082 COX4I1P13073 169 aa8.18□□□□□ -1.1
ATXN3-235ENST00000556082 GFAPP14136 432 aa8.18□□□□□ -1.1
ATXN3-235ENST00000556082 NCF2P19878 526 aaPredicted RBP8.18□□□□□ -1.1
ATXN3-235ENST00000556082 DGKAP23743 735 aa8.18□□□□□ -1.1
ATXN3-235ENST00000556082 EPHA3P29320 983 aa8.18□□□□□ -1.1
ATXN3-235ENST00000556082 VIPR1P32241 457 aa8.18□□□□□ -1.1
ATXN3-235ENST00000556082 PGM1P36871 562 aa8.18□□□□□ -1.1
ATXN3-235ENST00000556082 SPINT3P49223 89 aa8.18□□□□□ -1.1
ATXN3-235ENST00000556082 RGS4P49798 205 aa8.18□□□□□ -1.1
ATXN3-235ENST00000556082 ATP4BP51164 291 aa8.18□□□□□ -1.1
ATXN3-235ENST00000556082 KDSRQ06136 332 aa8.18□□□□□ -1.1
ATXN3-235ENST00000556082 LCP2Q13094 533 aa8.18□□□□□ -1.1
ATXN3-235ENST00000556082 CBX2Q14781 532 aaPredicted RBP8.18□□□□□ -1.1
ATXN3-235ENST00000556082 EIF4HQ15056 248 aaKnown RBP8.18□□□□□ -1.1
ATXN3-235ENST00000556082 PDGFRLQ15198 375 aa8.18□□□□□ -1.1
ATXN3-235ENST00000556082 PCBP2Q15366 365 aaKnown RBP eCLIP8.18□□□□□ -1.1
ATXN3-235ENST00000556082 TSNQ15631 228 aaKnown RBP8.18□□□□□ -1.1
ATXN3-235ENST00000556082 PFKFB4Q16877 469 aa8.18□□□□□ -1.1
ATXN3-235ENST00000556082 GEN1Q17RS7 908 aa8.18□□□□□ -1.1
ATXN3-235ENST00000556082 ZNF805Q5CZA5 627 aa8.18□□□□□ -1.1
ATXN3-235ENST00000556082 FAM78AQ5JUQ0 283 aa8.18□□□□□ -1.1
ATXN3-235ENST00000556082 LRRC66Q68CR7 880 aa8.18□□□□□ -1.1
ATXN3-235ENST00000556082 ANKS6Q68DC2 871 aa8.18□□□□□ -1.1
ATXN3-235ENST00000556082 PTRHD1Q6GMV3 140 aaKnown RBP8.18□□□□□ -1.1
ATXN3-235ENST00000556082 FAM109BQ6ICB4 259 aaPredicted RBP8.18□□□□□ -1.1
ATXN3-235ENST00000556082 FAM151BQ6UXP7 276 aa8.18□□□□□ -1.1
ATXN3-235ENST00000556082 EFL1Q7Z2Z2 1120 aaKnown RBP8.18□□□□□ -1.1
ATXN3-235ENST00000556082 ADGRD2Q7Z7M1 963 aa8.18□□□□□ -1.1
ATXN3-235ENST00000556082 GPR149Q86SP6 731 aa8.18□□□□□ -1.1
ATXN3-235ENST00000556082 ADAMTSL2Q86TH1 951 aa8.18□□□□□ -1.1
ATXN3-235ENST00000556082 GPSM1Q86YR5 675 aa8.18□□□□□ -1.1
ATXN3-235ENST00000556082 PELI3Q8N2H9 469 aa8.18□□□□□ -1.1
ATXN3-235ENST00000556082 PAF1Q8N7H5 531 aa8.18□□□□□ -1.1
ATXN3-235ENST00000556082 SIDT2Q8NBJ9 832 aaKnown RBP8.18□□□□□ -1.1
ATXN3-235ENST00000556082 CHST14Q8NCH0 376 aa8.18□□□□□ -1.1
ATXN3-235ENST00000556082 RBM15BQ8NDT2 890 aaKnown RBP8.18□□□□□ -1.1
ATXN3-235ENST00000556082 GPR26Q8NDV2 337 aa8.18□□□□□ -1.1
ATXN3-235ENST00000556082 VN1R2Q8NFZ6 395 aa8.18□□□□□ -1.1
ATXN3-235ENST00000556082 OR13H1Q8NG92 308 aa8.18□□□□□ -1.1
ATXN3-235ENST00000556082 BPIFB1Q8TDL5 484 aa8.18□□□□□ -1.1
ATXN3-235ENST00000556082 ZNF483Q8TF39 744 aaPredicted RBP8.18□□□□□ -1.1
ATXN3-235ENST00000556082 EEF1AKMT1Q8WVE0 214 aa8.18□□□□□ -1.1
ATXN3-235ENST00000556082 RSPRY1Q96DX4 576 aa8.18□□□□□ -1.1
ATXN3-235ENST00000556082 MOCOSQ96EN8 888 aa8.18□□□□□ -1.1
ATXN3-235ENST00000556082 LINGO1Q96FE5 620 aa8.18□□□□□ -1.1
ATXN3-235ENST00000556082 ASIC4Q96FT7 647 aa8.18□□□□□ -1.1
ATXN3-235ENST00000556082 KLHL32Q96NJ5 620 aa8.18□□□□□ -1.1
ATXN3-235ENST00000556082 CCT7Q99832 543 aa8.18□□□□□ -1.1
ATXN3-235ENST00000556082 FAM83CQ9BQN1 747 aa8.18□□□□□ -1.1
ATXN3-235ENST00000556082 RTKNQ9BST9 563 aa8.18□□□□□ -1.1
ATXN3-235ENST00000556082 NUF2Q9BZD4 464 aa8.18□□□□□ -1.1
ATXN3-235ENST00000556082 CIPCQ9C0C6 399 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms