RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 NUAK1O60285 661 aa10.03□□□□□ -0.8
SRP54-208ENST00000555557 MAGEC1O60732 1142 aa10.03□□□□□ -0.8
SRP54-208ENST00000555557 POP7O75817 140 aaKnown RBP10.03□□□□□ -0.8
SRP54-208ENST00000555557 CEACAM5P06731 702 aa10.03□□□□□ -0.8
SRP54-208ENST00000555557 CPA3P15088 417 aa10.03□□□□□ -0.8
SRP54-208ENST00000555557 BCKDHBP21953 392 aa10.03□□□□□ -0.8
SRP54-208ENST00000555557 TEAD1P28347 426 aa10.03□□□□□ -0.8
SRP54-208ENST00000555557 ALDH3A1P30838 453 aa10.03□□□□□ -0.8
SRP54-208ENST00000555557 AKT2P31751 481 aa10.03□□□□□ -0.8
SRP54-208ENST00000555557 PREPP48147 710 aa10.03□□□□□ -0.8
SRP54-208ENST00000555557 CCR5P51681 352 aa10.03□□□□□ -0.8
SRP54-208ENST00000555557 RPL6Q02878 288 aaKnown RBP10.03□□□□□ -0.8
SRP54-208ENST00000555557 PCLAFQ15004 111 aa10.03□□□□□ -0.8
SRP54-208ENST00000555557 TSNQ15631 228 aaKnown RBP10.03□□□□□ -0.8
SRP54-208ENST00000555557 KLC3Q6P597 504 aa10.03□□□□□ -0.8
SRP54-208ENST00000555557 CYHR1Q6ZMK1 362 aa10.03□□□□□ -0.8
SRP54-208ENST00000555557 CCDC91Q7Z6B0 441 aa10.03□□□□□ -0.8
SRP54-208ENST00000555557 CFAP206Q8IYR0 622 aa10.03□□□□□ -0.8
SRP54-208ENST00000555557 TMEM145Q8NBT3 493 aa10.03□□□□□ -0.8
SRP54-208ENST00000555557 CKAP2Q8WWK9 683 aa10.03□□□□□ -0.8
SRP54-208ENST00000555557 EXT2Q93063 718 aa10.03□□□□□ -0.8
SRP54-208ENST00000555557 MRPL57Q9BQC6 102 aaKnown RBP10.03□□□□□ -0.8
SRP54-208ENST00000555557 MRPL46Q9H2W6 279 aaKnown RBP10.03□□□□□ -0.8
SRP54-208ENST00000555557 RABEP2Q9H5N1 569 aa10.03□□□□□ -0.8
SRP54-208ENST00000555557 COPG2Q9UBF2 871 aa10.03□□□□□ -0.8
SRP54-208ENST00000555557 SLC23A2Q9UGH3 650 aa10.03□□□□□ -0.8
SRP54-208ENST00000555557 ZNHIT2Q9UHR6 403 aa10.03□□□□□ -0.8
SRP54-208ENST00000555557 CDYLQ9Y232 598 aa10.03□□□□□ -0.8
SRP54-208ENST00000555557 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.02□□□□□ -0.81
SRP54-208ENST00000555557 A0A1W2PPC4 97 aa10.02□□□□□ -0.81
SRP54-208ENST00000555557 PRAMEF26H0Y7S4 382 aa10.02□□□□□ -0.81
SRP54-208ENST00000555557 CACNB4O00305 520 aaPredicted RBP10.02□□□□□ -0.81
SRP54-208ENST00000555557 QSOX1O00391 747 aa10.02□□□□□ -0.81
SRP54-208ENST00000555557 CHUKO15111 745 aa10.02□□□□□ -0.81
SRP54-208ENST00000555557 GRID2O43424 1007 aa10.02□□□□□ -0.81
SRP54-208ENST00000555557 BPGMP07738 259 aa10.02□□□□□ -0.81
SRP54-208ENST00000555557 NEFHP12036 1026 aa10.02□□□□□ -0.81
SRP54-208ENST00000555557 BGNP21810 368 aa10.02□□□□□ -0.81
SRP54-208ENST00000555557 DGKAP23743 735 aa10.02□□□□□ -0.81
SRP54-208ENST00000555557 PDHA2P29803 388 aa10.02□□□□□ -0.81
SRP54-208ENST00000555557 LSP1P33241 339 aa10.02□□□□□ -0.81
SRP54-208ENST00000555557 FNTBP49356 437 aa10.02□□□□□ -0.81
SRP54-208ENST00000555557 SEC24CP53992 1094 aa10.02□□□□□ -0.81
SRP54-208ENST00000555557 HNRNPH2P55795 449 aaKnown RBP10.02□□□□□ -0.81
SRP54-208ENST00000555557 PFN3P60673 137 aa10.02□□□□□ -0.81
SRP54-208ENST00000555557 TTLL9Q3SXZ7 439 aa10.02□□□□□ -0.81
SRP54-208ENST00000555557 BCL7AQ4VC05 210 aa10.02□□□□□ -0.81
SRP54-208ENST00000555557 USP39Q53GS9 565 aaKnown RBP10.02□□□□□ -0.81
SRP54-208ENST00000555557 CES4AQ5XG92 561 aa10.02□□□□□ -0.81
SRP54-208ENST00000555557 ENPP7Q6UWV6 458 aa10.02□□□□□ -0.81
SRP54-208ENST00000555557 MAMSTRQ6ZN01 415 aa10.02□□□□□ -0.81
SRP54-208ENST00000555557 Q6ZSR6 202 aa10.02□□□□□ -0.81
SRP54-208ENST00000555557 ZCCHC23Q6ZST2 131 aa10.02□□□□□ -0.81
SRP54-208ENST00000555557 C11orf96Q7Z7L8 435 aa10.02□□□□□ -0.81
SRP54-208ENST00000555557 LCA5Q86VQ0 697 aa10.02□□□□□ -0.81
SRP54-208ENST00000555557 NUDCD3Q8IVD9 361 aa10.02□□□□□ -0.81
SRP54-208ENST00000555557 TMEFF1Q8IYR6 380 aa10.02□□□□□ -0.81
SRP54-208ENST00000555557 TMEM105Q8N8V8 129 aa10.02□□□□□ -0.81
SRP54-208ENST00000555557 DENND6BQ8NEG7 585 aa10.02□□□□□ -0.81
SRP54-208ENST00000555557 SKA2Q8WVK7 121 aaPredicted RBP10.02□□□□□ -0.81
SRP54-208ENST00000555557 KIAA1191Q96A73 305 aa10.02□□□□□ -0.81
SRP54-208ENST00000555557 ORAI3Q9BRQ5 295 aa10.02□□□□□ -0.81
SRP54-208ENST00000555557 TSSK1BQ9BXA7 367 aa10.02□□□□□ -0.81
SRP54-208ENST00000555557 EPHX3Q9H6B9 360 aa10.02□□□□□ -0.81
SRP54-208ENST00000555557 ADAMTS6Q9UKP5 1117 aa10.02□□□□□ -0.81
SRP54-208ENST00000555557 DNAJC16Q9Y2G8 782 aa10.02□□□□□ -0.81
SRP54-208ENST00000555557 ZDBF2Q9HCK1 2354 aa10.02□□□□□ -0.81
SRP54-208ENST00000555557 NCF1BA6NI72 391 aaPredicted RBP10.01□□□□□ -0.81
SRP54-208ENST00000555557 METTL12A8MUP2 240 aa10.01□□□□□ -0.81
SRP54-208ENST00000555557 NCF1CA8MVU1 366 aaPredicted RBP10.01□□□□□ -0.81
SRP54-208ENST00000555557 UBXN8O00124 270 aa10.01□□□□□ -0.81
SRP54-208ENST00000555557 MAP3K13O43283 966 aa10.01□□□□□ -0.81
SRP54-208ENST00000555557 DLX3O60479 287 aa10.01□□□□□ -0.81
SRP54-208ENST00000555557 GPC4O75487 556 aa10.01□□□□□ -0.81
SRP54-208ENST00000555557 APOA4P06727 396 aa10.01□□□□□ -0.81
SRP54-208ENST00000555557 RBP1P09455 135 aa10.01□□□□□ -0.81
SRP54-208ENST00000555557 MYL2P10916 166 aa10.01□□□□□ -0.81
SRP54-208ENST00000555557 NCF1P14598 390 aaPredicted RBP10.01□□□□□ -0.81
SRP54-208ENST00000555557 MAGEA9P43362 315 aa10.01□□□□□ -0.81
SRP54-208ENST00000555557 RGS4P49798 205 aa10.01□□□□□ -0.81
SRP54-208ENST00000555557 ATP6V0D1P61421 351 aa10.01□□□□□ -0.81
SRP54-208ENST00000555557 NFE2L1Q14494 772 aa10.01□□□□□ -0.81
SRP54-208ENST00000555557 TCEA2Q15560 299 aa10.01□□□□□ -0.81
SRP54-208ENST00000555557 PDK4Q16654 411 aa10.01□□□□□ -0.81
SRP54-208ENST00000555557 SYTL3Q4VX76 610 aa10.01□□□□□ -0.81
SRP54-208ENST00000555557 FBXO48Q5FWF7 155 aa10.01□□□□□ -0.81
SRP54-208ENST00000555557 LAYNQ6UX15 382 aa10.01□□□□□ -0.81
SRP54-208ENST00000555557 XKR5Q6UX68 686 aa10.01□□□□□ -0.81
SRP54-208ENST00000555557 FAM83HQ6ZRV2 1179 aaPredicted RBP10.01□□□□□ -0.81
SRP54-208ENST00000555557 CHST15Q7LFX5 561 aaPredicted RBP10.01□□□□□ -0.81
SRP54-208ENST00000555557 RD3Q7Z3Z2 195 aa10.01□□□□□ -0.81
SRP54-208ENST00000555557 LRRTM4Q86VH4 590 aa10.01□□□□□ -0.81
SRP54-208ENST00000555557 MAML2Q8IZL2 1156 aaPredicted RBP10.01□□□□□ -0.81
SRP54-208ENST00000555557 MYO1HQ8N1T3 1032 aa10.01□□□□□ -0.81
SRP54-208ENST00000555557 OR13H1Q8NG92 308 aa10.01□□□□□ -0.81
SRP54-208ENST00000555557 ASZ1Q8WWH4 475 aa10.01□□□□□ -0.81
SRP54-208ENST00000555557 ZNF75CPQ92670 426 aaPredicted RBP10.01□□□□□ -0.81
SRP54-208ENST00000555557 DLG3Q92796 817 aa10.01□□□□□ -0.81
SRP54-208ENST00000555557 PHF21BQ96EK2 531 aa10.01□□□□□ -0.81
SRP54-208ENST00000555557 PDLIM5Q96HC4 596 aaKnown RBP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms