RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 PCSK9Q8NBP7 692 aaKnown RBP10.56□□□□□ -0.72
MTHFD1-210ENST00000555252 KLHDC9Q8NEP7 349 aa10.56□□□□□ -0.72
MTHFD1-210ENST00000555252 OR13J1Q8NGT2 312 aa10.56□□□□□ -0.72
MTHFD1-210ENST00000555252 ZFP90Q8TF47 636 aa10.56□□□□□ -0.72
MTHFD1-210ENST00000555252 ISG20Q96AZ6 181 aaKnown RBP10.56□□□□□ -0.72
MTHFD1-210ENST00000555252 TUBGCP3Q96CW5 907 aa10.56□□□□□ -0.72
MTHFD1-210ENST00000555252 OSBPL10Q9BXB5 764 aa10.56□□□□□ -0.72
MTHFD1-210ENST00000555252 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.56□□□□□ -0.725e-8■■■□□ 18
MTHFD1-210ENST00000555252 TOR3AQ9H497 397 aa10.56□□□□□ -0.72
MTHFD1-210ENST00000555252 SOX17Q9H6I2 414 aaPredicted RBP10.56□□□□□ -0.72
MTHFD1-210ENST00000555252 ABI2Q9NYB9 513 aaPredicted RBP10.56□□□□□ -0.72
MTHFD1-210ENST00000555252 POLG2Q9UHN1 485 aa10.56□□□□□ -0.72
MTHFD1-210ENST00000555252 NOD1Q9Y239 953 aa10.56□□□□□ -0.72
MTHFD1-210ENST00000555252 TESMINQ9Y4I5 508 aa10.56□□□□□ -0.72
MTHFD1-210ENST00000555252 PCDHGA8Q9Y5G5 932 aa10.56□□□□□ -0.72
MTHFD1-210ENST00000555252 HSPE1-MOB4S4R3N1 261 aa10.56□□□□□ -0.72
MTHFD1-210ENST00000555252 A3GALT2U3KPV4 340 aa10.56□□□□□ -0.72
MTHFD1-210ENST00000555252 ANKRD12Q6UB98 2062 aa10.56□□□□□ -0.72
MTHFD1-210ENST00000555252 FAM234BA2RU67 622 aa10.56□□□□□ -0.72
MTHFD1-210ENST00000555252 CCDC154A6NI56 674 aa10.56□□□□□ -0.72
MTHFD1-210ENST00000555252 DRGXA6NNA5 263 aa10.56□□□□□ -0.72
MTHFD1-210ENST00000555252 CENPBD1B2RD01 187 aa10.56□□□□□ -0.72
MTHFD1-210ENST00000555252 G3V2T6 193 aa10.56□□□□□ -0.72
MTHFD1-210ENST00000555252 SLC1A7O00341 560 aa10.56□□□□□ -0.72
MTHFD1-210ENST00000555252 B4GAT1O43505 415 aa10.56□□□□□ -0.72
MTHFD1-210ENST00000555252 SOAT2O75908 522 aa10.56□□□□□ -0.72
MTHFD1-210ENST00000555252 CYBBP04839 570 aa10.56□□□□□ -0.72
MTHFD1-210ENST00000555252 ANXA6P08133 673 aa10.56□□□□□ -0.72
MTHFD1-210ENST00000555252 BMP4P12644 408 aa10.56□□□□□ -0.72
MTHFD1-210ENST00000555252 HGFP14210 728 aa10.56□□□□□ -0.72
MTHFD1-210ENST00000555252 IL12AP29459 219 aa10.56□□□□□ -0.72
MTHFD1-210ENST00000555252 CD86P42081 329 aa10.56□□□□□ -0.72
MTHFD1-210ENST00000555252 GP2P55259 537 aaKnown RBP10.56□□□□□ -0.72
MTHFD1-210ENST00000555252 TPTEP56180 551 aa10.56□□□□□ -0.72
MTHFD1-210ENST00000555252 YBEYP58557 167 aaPredicted RBP10.56□□□□□ -0.72
MTHFD1-210ENST00000555252 CXCR4P61073 352 aa10.56□□□□□ -0.72
MTHFD1-210ENST00000555252 PPP2R2BQ00005 443 aa10.56□□□□□ -0.72
MTHFD1-210ENST00000555252 IFITM3Q01628 133 aa10.56□□□□□ -0.72
MTHFD1-210ENST00000555252 DSC1Q08554 894 aa10.56□□□□□ -0.72
MTHFD1-210ENST00000555252 SREBF2Q12772 1141 aa10.56□□□□□ -0.72
MTHFD1-210ENST00000555252 KCNA10Q16322 511 aa10.56□□□□□ -0.72
MTHFD1-210ENST00000555252 OTUD3Q5T2D3 398 aaPredicted RBP10.56□□□□□ -0.72
MTHFD1-210ENST00000555252 GLYATQ6IB77 296 aa10.56□□□□□ -0.72
MTHFD1-210ENST00000555252 RGMBQ6NW40 437 aa10.56□□□□□ -0.72
MTHFD1-210ENST00000555252 BTLAQ7Z6A9 289 aa10.56□□□□□ -0.72
MTHFD1-210ENST00000555252 ADCK1Q86TW2 530 aa10.56□□□□□ -0.72
MTHFD1-210ENST00000555252 CILP2Q8IUL8 1156 aa10.56□□□□□ -0.72
MTHFD1-210ENST00000555252 RHOXF1Q8NHV9 184 aa10.56□□□□□ -0.72
MTHFD1-210ENST00000555252 DYNC2LI1Q8TCX1 351 aa10.56□□□□□ -0.72
MTHFD1-210ENST00000555252 HMCESQ96FZ2 354 aa10.56□□□□□ -0.72
MTHFD1-210ENST00000555252 HERC2P3Q9BVR0 1158 aa10.56□□□□□ -0.72
MTHFD1-210ENST00000555252 ATXN3LQ9H3M9 355 aa10.56□□□□□ -0.72
MTHFD1-210ENST00000555252 RETREG1Q9H6L5 497 aa10.56□□□□□ -0.72
MTHFD1-210ENST00000555252 MID1IP1Q9NPA3 183 aa10.56□□□□□ -0.72
MTHFD1-210ENST00000555252 RIMKLBQ9ULI2 386 aa10.56□□□□□ -0.72
MTHFD1-210ENST00000555252 AP3M1Q9Y2T2 418 aa10.56□□□□□ -0.72
MTHFD1-210ENST00000555252 LOC285095A0A1B0GVY8 99 aa10.55□□□□□ -0.72
MTHFD1-210ENST00000555252 FAM92AA1XBS5 289 aa10.55□□□□□ -0.72
MTHFD1-210ENST00000555252 SLC16A6O15403 523 aa10.55□□□□□ -0.72
MTHFD1-210ENST00000555252 EPOP01588 193 aa10.55□□□□□ -0.72
MTHFD1-210ENST00000555252 PBX3P40426 434 aa10.55□□□□□ -0.72
MTHFD1-210ENST00000555252 MAPKAPK2P49137 400 aa10.55□□□□□ -0.72
MTHFD1-210ENST00000555252 PGFP49763 221 aa10.55□□□□□ -0.72
MTHFD1-210ENST00000555252 PLK1P53350 603 aa10.55□□□□□ -0.72
MTHFD1-210ENST00000555252 ACVR1Q04771 509 aa10.55□□□□□ -0.72
MTHFD1-210ENST00000555252 SELPLGQ14242 412 aa10.55□□□□□ -0.72
MTHFD1-210ENST00000555252 GRB7Q14451 532 aa10.55□□□□□ -0.72
MTHFD1-210ENST00000555252 DPY19L1Q2PZI1 675 aa10.55□□□□□ -0.72
MTHFD1-210ENST00000555252 TRIM71Q2Q1W2 868 aaKnown RBP10.55□□□□□ -0.72
MTHFD1-210ENST00000555252 NOMO2Q5JPE7 1267 aa10.55□□□□□ -0.72
MTHFD1-210ENST00000555252 LDLRAP1Q5SW96 308 aa10.55□□□□□ -0.72
MTHFD1-210ENST00000555252 ZNF691Q5VV52 312 aa10.55□□□□□ -0.72
MTHFD1-210ENST00000555252 TMEM214Q6NUQ4 689 aaKnown RBP10.55□□□□□ -0.72
MTHFD1-210ENST00000555252 SLC24A5Q71RS6 500 aa10.55□□□□□ -0.72
MTHFD1-210ENST00000555252 STK32CQ86UX6 486 aa10.55□□□□□ -0.72
MTHFD1-210ENST00000555252 KIAA2013Q8IYS2 634 aa10.55□□□□□ -0.72
MTHFD1-210ENST00000555252 SVOPQ8N4V2 548 aa10.55□□□□□ -0.72
MTHFD1-210ENST00000555252 SETD9Q8NE22 299 aa10.55□□□□□ -0.72
MTHFD1-210ENST00000555252 GPR150Q8NGU9 434 aa10.55□□□□□ -0.72
MTHFD1-210ENST00000555252 ITFG1Q8TB96 612 aa10.55□□□□□ -0.72
MTHFD1-210ENST00000555252 DNAJB14Q8TBM8 379 aa10.55□□□□□ -0.72
MTHFD1-210ENST00000555252 YIPF6Q96EC8 236 aa10.55□□□□□ -0.72
MTHFD1-210ENST00000555252 REXO5Q96IC2 774 aaKnown RBP10.55□□□□□ -0.72
MTHFD1-210ENST00000555252 SEPHS2Q99611 448 aa10.55□□□□□ -0.72
MTHFD1-210ENST00000555252 ASPSCR1Q9BZE9 553 aa10.55□□□□□ -0.72
MTHFD1-210ENST00000555252 HOXD1Q9GZZ0 328 aa10.55□□□□□ -0.72
MTHFD1-210ENST00000555252 TRIT1Q9H3H1 467 aaKnown RBP10.55□□□□□ -0.72
MTHFD1-210ENST00000555252 GORASP2Q9H8Y8 452 aa10.55□□□□□ -0.72
MTHFD1-210ENST00000555252 DGKBQ9Y6T7 804 aa10.55□□□□□ -0.72
MTHFD1-210ENST00000555252 PLXNA3P51805 1871 aa10.55□□□□□ -0.72
MTHFD1-210ENST00000555252 ASPDHA6ND91 283 aa10.54□□□□□ -0.72
MTHFD1-210ENST00000555252 OR6C75A6NL08 312 aa10.54□□□□□ -0.72
MTHFD1-210ENST00000555252 J3KR12 359 aa10.54□□□□□ -0.72
MTHFD1-210ENST00000555252 ARNTLO00327 626 aa10.54□□□□□ -0.72
MTHFD1-210ENST00000555252 ASNA1O43681 348 aa10.54□□□□□ -0.72
MTHFD1-210ENST00000555252 SLC22A3O75751 556 aa10.54□□□□□ -0.72
MTHFD1-210ENST00000555252 NADKO95544 446 aaPredicted RBP10.54□□□□□ -0.72
MTHFD1-210ENST00000555252 PTTG1O95997 202 aa10.54□□□□□ -0.72
MTHFD1-210ENST00000555252 MMP2P08253 660 aa10.54□□□□□ -0.72
MTHFD1-210ENST00000555252 OR4Q2P0C623 313 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms