RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 GGT5P36269 586 aa8.76□□□□□ -1.01
TDP1-210ENST00000554976 RECQLP46063 649 aaPredicted RBP8.76□□□□□ -1.01
TDP1-210ENST00000554976 CDKL1Q00532 357 aa8.76□□□□□ -1.01
TDP1-210ENST00000554976 DPTQ07507 201 aa8.76□□□□□ -1.01
TDP1-210ENST00000554976 CDC16Q13042 620 aa8.76□□□□□ -1.01
TDP1-210ENST00000554976 LCP2Q13094 533 aa8.76□□□□□ -1.01
TDP1-210ENST00000554976 HTR4Q13639 388 aa8.76□□□□□ -1.01
TDP1-210ENST00000554976 PHKG1Q16816 387 aa8.76□□□□□ -1.01
TDP1-210ENST00000554976 TMEM198Q66K66 360 aa8.76□□□□□ -1.01
TDP1-210ENST00000554976 PTRHD1Q6GMV3 140 aaKnown RBP8.76□□□□□ -1.01
TDP1-210ENST00000554976 NEK10Q6ZWH5 1172 aa8.76□□□□□ -1.01
TDP1-210ENST00000554976 LONP2Q86WA8 852 aa8.76□□□□□ -1.01
TDP1-210ENST00000554976 VRK3Q8IV63 474 aa8.76□□□□□ -1.01
TDP1-210ENST00000554976 KLHDC8AQ8IYD2 350 aa8.76□□□□□ -1.01
TDP1-210ENST00000554976 PIP4K2CQ8TBX8 421 aa8.76□□□□□ -1.01
TDP1-210ENST00000554976 BTN2A2Q8WVV5 523 aa8.76□□□□□ -1.01
TDP1-210ENST00000554976 KCNA7Q96RP8 456 aa8.76□□□□□ -1.01
TDP1-210ENST00000554976 COPS8Q99627 209 aa8.76□□□□□ -1.01
TDP1-210ENST00000554976 ZSCAN5AQ9BUG6 496 aa8.76□□□□□ -1.01
TDP1-210ENST00000554976 RIOK2Q9BVS4 552 aaKnown RBP8.76□□□□□ -1.01
TDP1-210ENST00000554976 FAM83DQ9H4H8 585 aa8.76□□□□□ -1.01
TDP1-210ENST00000554976 BATF3Q9NR55 127 aa8.76□□□□□ -1.01
TDP1-210ENST00000554976 GULP1Q9UBP9 304 aa8.76□□□□□ -1.01
TDP1-210ENST00000554976 SHISA7A6NL88 538 aa8.75□□□□□ -1.01
TDP1-210ENST00000554976 MAGEC1O60732 1142 aa8.75□□□□□ -1.01
TDP1-210ENST00000554976 SUPT7LO94864 414 aa8.75□□□□□ -1.01
TDP1-210ENST00000554976 ALDOCP09972 364 aaKnown RBP8.75□□□□□ -1.01
TDP1-210ENST00000554976 DGKAP23743 735 aa8.75□□□□□ -1.01
TDP1-210ENST00000554976 ZFP36L2P47974 494 aaKnown RBP8.75□□□□□ -1.01
TDP1-210ENST00000554976 RASSF2P50749 326 aa8.75□□□□□ -1.01
TDP1-210ENST00000554976 ATP4BP51164 291 aa8.75□□□□□ -1.01
TDP1-210ENST00000554976 CDH13P55290 713 aa8.75□□□□□ -1.01
TDP1-210ENST00000554976 ZBTB16Q05516 673 aa8.75□□□□□ -1.01
TDP1-210ENST00000554976 FNDC3BQ53EP0 1204 aaKnown RBP8.75□□□□□ -1.01
TDP1-210ENST00000554976 CFAP157Q5JU67 520 aa8.75□□□□□ -1.01
TDP1-210ENST00000554976 METTL2BQ6P1Q9 378 aaKnown RBP8.75□□□□□ -1.01
TDP1-210ENST00000554976 ADAMTSL2Q86TH1 951 aa8.75□□□□□ -1.01
TDP1-210ENST00000554976 GPSM1Q86YR5 675 aa8.75□□□□□ -1.01
TDP1-210ENST00000554976 KIRREL3Q8IZU9 778 aa8.75□□□□□ -1.01
TDP1-210ENST00000554976 CLYBLQ8N0X4 340 aa8.75□□□□□ -1.01
TDP1-210ENST00000554976 TEX9Q8N6V9 391 aa8.75□□□□□ -1.01
TDP1-210ENST00000554976 SMRP1Q8NCR6 262 aa8.75□□□□□ -1.01
TDP1-210ENST00000554976 RHBDF1Q96CC6 855 aa8.75□□□□□ -1.01
TDP1-210ENST00000554976 ZNF382Q96SR6 550 aa8.75□□□□□ -1.01
TDP1-210ENST00000554976 SLC52A3Q9NQ40 469 aa8.75□□□□□ -1.01
TDP1-210ENST00000554976 CHCHD3Q9NX63 227 aaKnown RBP8.75□□□□□ -1.01
TDP1-210ENST00000554976 KCTD5Q9NXV2 234 aa8.75□□□□□ -1.01
TDP1-210ENST00000554976 SLC8A2Q9UPR5 921 aa8.75□□□□□ -1.01
TDP1-210ENST00000554976 MTCH2Q9Y6C9 303 aa8.75□□□□□ -1.01
TDP1-210ENST00000554976 C10orf142B7Z368 130 aa8.75□□□□□ -1.01
TDP1-210ENST00000554976 GFYI3L273 518 aa8.75□□□□□ -1.01
TDP1-210ENST00000554976 FFAR2O15552 330 aa8.75□□□□□ -1.01
TDP1-210ENST00000554976 DCXO43602 365 aa8.75□□□□□ -1.01
TDP1-210ENST00000554976 KAT7O95251 611 aa8.75□□□□□ -1.01
TDP1-210ENST00000554976 ITGB6P18564 788 aa8.75□□□□□ -1.01
TDP1-210ENST00000554976 PIK3R1P27986 724 aa8.75□□□□□ -1.01
TDP1-210ENST00000554976 P2RY2P41231 377 aa8.75□□□□□ -1.01
TDP1-210ENST00000554976 GRIA2P42262 883 aa8.75□□□□□ -1.01
TDP1-210ENST00000554976 PRLHRP49683 370 aa8.75□□□□□ -1.01
TDP1-210ENST00000554976 COPAP53621 1224 aa8.75□□□□□ -1.01
TDP1-210ENST00000554976 TAS2R38P59533 333 aa8.75□□□□□ -1.01
TDP1-210ENST00000554976 TRAF3Q13114 568 aa8.75□□□□□ -1.01
TDP1-210ENST00000554976 CAMK2GQ13555 558 aaPredicted RBP8.75□□□□□ -1.01
TDP1-210ENST00000554976 ARHGEF7Q14155 803 aa8.75□□□□□ -1.01
TDP1-210ENST00000554976 AGERQ15109 404 aa8.75□□□□□ -1.01
TDP1-210ENST00000554976 CDKL4Q5MAI5 379 aa8.75□□□□□ -1.01
TDP1-210ENST00000554976 PLEKHS1Q5SXH7 462 aa8.75□□□□□ -1.01
TDP1-210ENST00000554976 COL13A1Q5TAT6 717 aaPredicted RBP8.75□□□□□ -1.01
TDP1-210ENST00000554976 PGM2L1Q6PCE3 622 aa8.75□□□□□ -1.01
TDP1-210ENST00000554976 SERPINA13PQ6UXR4 307 aa8.75□□□□□ -1.01
TDP1-210ENST00000554976 ERN2Q76MJ5 926 aaKnown RBP8.75□□□□□ -1.01
TDP1-210ENST00000554976 TMPRSS6Q8IU80 811 aa8.75□□□□□ -1.01
TDP1-210ENST00000554976 OR8D1Q8WZ84 308 aa8.75□□□□□ -1.01
TDP1-210ENST00000554976 EXT2Q93063 718 aa8.75□□□□□ -1.01
TDP1-210ENST00000554976 RAB3IPQ96QF0 476 aaPredicted RBP8.75□□□□□ -1.01
TDP1-210ENST00000554976 TTC1Q99614 292 aa8.75□□□□□ -1.01
TDP1-210ENST00000554976 SPATA16Q9BXB7 569 aa8.75□□□□□ -1.01
TDP1-210ENST00000554976 RSPH9Q9H1X1 276 aaPredicted RBP8.75□□□□□ -1.01
TDP1-210ENST00000554976 CCL27Q9Y4X3 112 aa8.75□□□□□ -1.01
TDP1-210ENST00000554976 PTGDR2Q9Y5Y4 395 aa8.75□□□□□ -1.01
TDP1-210ENST00000554976 A0A088AWK7 358 aa8.75□□□□□ -1.01
TDP1-210ENST00000554976 PLK4O00444 970 aa8.75□□□□□ -1.01
TDP1-210ENST00000554976 SLCO2B1O94956 709 aa8.75□□□□□ -1.01
TDP1-210ENST00000554976 MATN4O95460 622 aa8.75□□□□□ -1.01
TDP1-210ENST00000554976 ESRRBO95718 433 aa8.75□□□□□ -1.01
TDP1-210ENST00000554976 ESRRAP11474 423 aaPredicted RBP8.75□□□□□ -1.01
TDP1-210ENST00000554976 COX4I1P13073 169 aa8.75□□□□□ -1.01
TDP1-210ENST00000554976 ITGAXP20702 1163 aa8.75□□□□□ -1.01
TDP1-210ENST00000554976 CPA2P48052 419 aa8.75□□□□□ -1.01
TDP1-210ENST00000554976 ST8SIA6P61647 398 aa8.75□□□□□ -1.01
TDP1-210ENST00000554976 BCL7AQ4VC05 210 aa8.75□□□□□ -1.01
TDP1-210ENST00000554976 FBXO48Q5FWF7 155 aa8.75□□□□□ -1.01
TDP1-210ENST00000554976 C8orf82Q6P1X6 216 aaPredicted RBP8.75□□□□□ -1.01
TDP1-210ENST00000554976 PARP9Q8IXQ6 854 aa8.75□□□□□ -1.01
TDP1-210ENST00000554976 AADATQ8N5Z0 425 aa8.75□□□□□ -1.01
TDP1-210ENST00000554976 RASGEF1AQ8N9B8 481 aa8.75□□□□□ -1.01
TDP1-210ENST00000554976 TRPC4APQ8TEL6 797 aa8.75□□□□□ -1.01
TDP1-210ENST00000554976 PPP2R3CQ969Q6 453 aa8.75□□□□□ -1.01
TDP1-210ENST00000554976 C19orf60Q96EN9 201 aa8.75□□□□□ -1.01
TDP1-210ENST00000554976 NUSAP1Q9BXS6 441 aaKnown RBP8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms